Interaction network for MSAT48
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Show the eQTL profiles of traits with a LOD score above the threshold at the selected locus.
Trait (count=14) Type Name LOD score Position Description
AT5G66490 gene 4.39 5:26547227 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50900.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G09160 gene 3.70 4:05839599 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: transport%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function%2C C-terminal (InterPro:IPR001251)%2C Cellular retinaldehyde-binding/triple function%2C N-terminal (InterPro:IPR008273)%2C GOLD (InterPro:IPR009038)%2C Phosphatidylinositol transfer protein-like%2C N-terminal (InterPro:IPR011074)%3B BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G72160.1)%3B Has 12185 Blast hits to 8606 proteins in 820 species: Archae - 53%3B Bacteria - 1604%3B Metazoa - 4851%3B Fungi - 2300%3B Plants - 1007%3B Viruses - 130%3B Other Eukaryotes - 2240 (source: NCBI BLink).
AT3G46130 gene MYB48 3.15 3:16945230 Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.
AT2G11310 gene 3.10 2:04494444 transposable element gene [Source:TAIR;Acc:AT2G11310]
AT3G25165 gene RALFL25 3.04 3:09163340 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF)%2C and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
AT3G23090 gene -3.03 3:08214289 TPX2 (targeting protein for Xklp2) protein family%3B CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675)%3B BEST Arabidopsis thaliana protein match is: WVD2-like 1 (TAIR:AT3G04630.3)%3B Has 678 Blast hits to 638 proteins in 104 species: Archae - 2%3B Bacteria - 22%3B Metazoa - 209%3B Fungi - 27%3B Plants - 299%3B Viruses - 0%3B Other Eukaryotes - 119 (source: NCBI BLink).
AT5G43660 gene -3.05 5:17535970 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C iron ion binding%2C L-ascorbic acid binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase%2C alpha subunit (InterPro:IPR006620)%3B BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G48740.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G62220 gene -3.14 3:23029018 Protein kinase superfamily protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G47060.4)%3B Has 114745 Blast hits to 113433 proteins in 4682 species: Archae - 113%3B Bacteria - 13563%3B Metazoa - 42319%3B Fungi - 9347%3B Plants - 32428%3B Viruses - 387%3B Other Eukaryotes - 16588 (source: NCBI BLink).
AT5G25000 gene -3.14 5:08613966 unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G05090 gene -3.16 5:01503232 Homeodomain-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10760.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT2G28370 gene -3.16 2:12131544 Uncharacterised protein family (UPF0497)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G37200.1)%3B Has 210 Blast hits to 210 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 210%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G40847 gene -3.68 5:16365725 unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G40847]
AT2G39220 gene PLP6 -3.73 2:16374881 PATATIN-like protein 6 (PLP6)%3B FUNCTIONS IN: nutrient reservoir activity%3B INVOLVED IN: metabolic process%2C lipid metabolic process%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035)%2C Patatin (InterPro:IPR002641)%3B BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1)%3B Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0%3B Bacteria - 327%3B Metazoa - 139%3B Fungi - 43%3B Plants - 635%3B Viruses - 0%3B Other Eukaryotes - 150 (source: NCBI BLink).
AT4G37990 gene ELI3-2 -3.81 4:17855637 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases%2C this enzyme does not have mannitol dehydrogenase activity.