Interaction network for EC.198L
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Show the eQTL profiles of traits with a LOD score above the threshold at the selected locus.
Trait (count=125) Type Name LOD score Position Description
AT5G08370 gene AGAL2 29.87 5:02690879 alpha-galactosidase 2 (AGAL2)%3B FUNCTIONS IN: alpha-galactosidase activity%2C hydrolase activity%2C hydrolyzing O-glycosyl compounds%2C catalytic activity%3B INVOLVED IN: positive regulation of flower development%2C leaf morphogenesis%3B LOCATED IN: plant-type cell wall%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785)%2C Glycoside hydrolase%2C family 27 (InterPro:IPR002241)%2C Glycoside hydrolase%2C clan GH-D (InterPro:IPR000111)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%3B BEST Arabidopsis thaliana protein match is: alpha-galactosidase 1 (TAIR:AT5G08380.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G53750 gene ACT3 22.72 3:19915257 Member of the Actin gene family. Expressed in mature pollen.
AT5G10030 gene TGA4 14.55 5:03137289 Encodes a member of basic leucine zipper transcription gene family. Nomenclature according to Xiang%2C et al. (1997).
AT5G10240 gene ASN3 11.91 5:03212651 Encodes asparagine synthetase (ASN3).
AT5G08000 gene E13L3 11.28 5:02563366 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.
AT5G08190 gene NF-YB12 10.61 5:02635832 nuclear factor Y%2C subunit B12 (NF-YB12)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958)%2C Histone-fold (InterPro:IPR009072)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit B13 (TAIR:AT5G23090.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G08660 gene 10.41 5:02813870 Protein of unknown function (DUF668)%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: mitochondrion%2C plasma membrane%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700)%2C Protein of unknown function DUF3475 (InterPro:IPR021864)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1)%3B Has 342 Blast hits to 276 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3%3B Fungi - 2%3B Plants - 333%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).
AT5G10700 gene 9.57 5:03378053 Peptidyl-tRNA hydrolase II (PTH2) family protein%3B FUNCTIONS IN: aminoacyl-tRNA hydrolase activity%2C protein tyrosine phosphatase activity%3B INVOLVED IN: protein amino acid dephosphorylation%2C translation%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase%2C PTH2 (InterPro:IPR002833)%2C Protein-tyrosine phosphatase%2C low molecular weight (InterPro:IPR017867)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G20330 gene BETAG4 9.18 5:06871511 beta-1%2C3-glucanase 4 (BETAG4)%3B FUNCTIONS IN: cation binding%2C hydrolase activity%2C hydrolyzing O-glycosyl compounds%2C catalytic activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C family 17 (InterPro:IPR000490)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%3B BEST Arabidopsis thaliana protein match is: beta-1%2C3-glucanase 5 (TAIR:AT5G20340.1)%3B Has 2115 Blast hits to 2103 proteins in 123 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3%3B Fungi - 0%3B Plants - 2105%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink).
AT5G07760 gene 9.14 5:02468040 formin homology 2 domain-containing protein / FH2 domain-containing protein%3B FUNCTIONS IN: actin binding%3B INVOLVED IN: cellular component organization%2C actin cytoskeleton organization%3B LOCATED IN: chloroplast%3B EXPRESSED IN: shoot apex%3B CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104)%2C Actin-binding FH2 (InterPro:IPR015425)%3B BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07650.1)%3B Has 48311 Blast hits to 23266 proteins in 1185 species: Archae - 68%3B Bacteria - 7011%3B Metazoa - 18492%3B Fungi - 4245%3B Plants - 10792%3B Viruses - 1661%3B Other Eukaryotes - 6042 (source: NCBI BLink).
AT5G10170 gene MIPS3 8.86 5:03187277 myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf%2C root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1%2C MIPS2%2C and MIPS3 showed endosperm localization.
AT2G37620 gene ACT1 8.54 2:15778941 Member of the actin gene family. Expressed in mature pollen.
AT5G07840 gene PIA1 7.71 5:02506656 Ankyrin repeat family protein%3B CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G61230.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G07770 gene 7.69 5:02474059 Actin-binding FH2 protein%3B FUNCTIONS IN: actin binding%3B INVOLVED IN: cellular component organization%2C actin cytoskeleton organization%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104)%2C Actin-binding FH2 (InterPro:IPR015425)%3B BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1)%3B Has 32498 Blast hits to 13926 proteins in 764 species: Archae - 52%3B Bacteria - 3235%3B Metazoa - 13136%3B Fungi - 3419%3B Plants - 6778%3B Viruses - 1558%3B Other Eukaryotes - 4320 (source: NCBI BLink).
AT5G07580 gene 7.63 5:02399726 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1%2C ATERF-2%2C AND ATERF-5.
AT5G12930 gene 7.55 5:04082890 unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G10810 gene ER 7.17 5:03418610 enhancer of rudimentary homolog ATER
AT5G09390 gene 7.03 5:02913482 CD2-binding protein-related%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: suppressor of abi3-5 (TAIR:AT3G54230.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G10180 gene SULTR2%3B1 7.02 5:03193017 Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder%2C where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation.
AT5G04850 gene VPS60.2 7.01 5:01407940 VPS60.2%3B CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024)%3B BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G10640.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G04880 gene 6.92 5:01420727 pseudogene of ABC transporter family protein [Source:TAIR;Acc:AT5G04880]
AT5G10770 gene 6.80 5:03403021 Eukaryotic aspartyl protease family protein%3B FUNCTIONS IN: DNA binding%2C aspartic-type endopeptidase activity%3B INVOLVED IN: proteolysis%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109)%2C Peptidase aspartic%2C catalytic (InterPro:IPR009007)%2C Peptidase A1 (InterPro:IPR001461)%3B BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G16010 gene 6.78 5:05227747 3-oxo-5-alpha-steroid 4-dehydrogenase family protein%3B FUNCTIONS IN: oxidoreductase activity%2C acting on the CH-CH group of donors%2C 3-oxo-5-alpha-steroid 4-dehydrogenase activity%3B INVOLVED IN: lipid metabolic process%3B LOCATED IN: chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase%2C C-terminal (InterPro:IPR001104)%3B BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G09330 gene NAC082 6.76 5:02892338 NAC domain containing protein 82 (NAC082)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: multicellular organismal development%2C regulation of transcription%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441)%3B BEST Arabidopsis thaliana protein match is: NAC domain containing protein 103 (TAIR:AT5G64060.1)%3B Has 3286 Blast hits to 2997 proteins in 111 species: Archae - 0%3B Bacteria - 34%3B Metazoa - 211%3B Fungi - 2%3B Plants - 2912%3B Viruses - 0%3B Other Eukaryotes - 127 (source: NCBI BLink).
AT4G08290 gene UMAMIT20 6.33 4:05238773 nodulin MtN21-like transporter family protein
AT5G06660 gene 6.25 5:02046785 FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF106%2C transmembrane (InterPro:IPR002809)%2C Uncharacterised conserved protein UCP023322%2C transmembrane eukaryotic (InterPro:IPR008559)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF106%2C transmembrane (TAIR:AT3G12030.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G72840 gene 6.17 1:27409196 Disease resistance protein (TIR-NBS-LRR class)%3B FUNCTIONS IN: transmembrane receptor activity%2C ATP binding%3B INVOLVED IN: signal transduction%2C defense response%2C apoptosis%2C innate immune response%3B LOCATED IN: intrinsic to membrane%3B EXPRESSED IN: ovule%2C embryo%2C sperm cell%2C root%2C seed%3B EXPRESSED DURING: E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182)%2C Toll-Interleukin receptor (InterPro:IPR000157)%2C Disease resistance protein (InterPro:IPR000767)%3B BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G09430.1)%3B Has 23413 Blast hits to 17312 proteins in 691 species: Archae - 12%3B Bacteria - 1355%3B Metazoa - 2695%3B Fungi - 176%3B Plants - 18489%3B Viruses - 0%3B Other Eukaryotes - 686 (source: NCBI BLink).
AT5G07780 gene FH19 6.07 5:02479514 Encodes a class II formin that nucleates actin assembly%2C binds to the barbed-end of actin filaments and antagonizes the effect of FH1 on actin dynamics.
AT3G10410 gene SCPL49 5.90 3:03235290 SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49)%3B FUNCTIONS IN: serine-type carboxypeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S10%2C serine carboxypeptidase (InterPro:IPR001563)%2C Peptidase S10%2C serine carboxypeptidase%2C active site (InterPro:IPR018202)%3B BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1)%3B Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0%3B Bacteria - 147%3B Metazoa - 678%3B Fungi - 883%3B Plants - 1454%3B Viruses - 0%3B Other Eukaryotes - 407 (source: NCBI BLink).
AT5G09290 gene 5.31 5:02882302 Inositol monophosphatase family protein%3B FUNCTIONS IN: 3'(2')%2C5'-bisphosphate nucleotidase activity%2C inositol or phosphatidylinositol phosphatase activity%3B INVOLVED IN: sulfur metabolic process%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760)%2C 3(2)%2C5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239)%2C Inositol monophosphatase%2C metal-binding site (InterPro:IPR020583)%3B BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1)%3B Has 10680 Blast hits to 10676 proteins in 1898 species: Archae - 61%3B Bacteria - 6716%3B Metazoa - 401%3B Fungi - 268%3B Plants - 330%3B Viruses - 0%3B Other Eukaryotes - 2904 (source: NCBI BLink).
AT4G15760 gene MO1 5.27 4:08972649 Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA).
AT5G06910 gene ATJ6 5.21 5:02140400 DnaJ homologue%2C contains J domain which is common in all known DnaJ proteins but missing G/F domain.
AT2G09970 gene 5.18 2:03779992 Protein of unknown function (DUF1677)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677%2C plant (InterPro:IPR012876)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT1G72510.2)%3B Has 243 Blast hits to 243 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 243%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G09690 gene 5.12 4:06124897 Cysteine/Histidine-rich C1 domain family protein%3B CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146)%2C C1-like (InterPro:IPR011424)%3B BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01760.1)%3B Has 1746 Blast hits to 588 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 8%3B Fungi - 0%3B Plants - 1734%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).
AT1G65210 gene 5.05 1:24224812 Galactose-binding protein%3B CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325)%2C Galactose-binding domain-like (InterPro:IPR008979)%3B BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G38030.1)%3B Has 208 Blast hits to 151 proteins in 22 species: Archae - 0%3B Bacteria - 16%3B Metazoa - 0%3B Fungi - 0%3B Plants - 192%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G08600 gene 4.97 5:02786177 U3 ribonucleoprotein (Utp) family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: rRNA processing%3B LOCATED IN: small-subunit processome%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Small-subunit processome%2C Utp14 (InterPro:IPR006709)%3B BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT4G02400.1)%3B Has 7611 Blast hits to 5651 proteins in 499 species: Archae - 10%3B Bacteria - 906%3B Metazoa - 2522%3B Fungi - 1145%3B Plants - 309%3B Viruses - 73%3B Other Eukaryotes - 2646 (source: NCBI BLink).
AT5G03210 gene DIP2 4.96 5:00762604 Encodes a small polypeptide contributing to resistance to potyvirus.
AT2G42840 gene PDF1 4.93 2:17826071 Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative%2C inflorescence and floral meristems and the protoderm of organ primordia.
AT4G31480 gene 4.85 4:15263016 Coatomer%2C beta subunit%3B FUNCTIONS IN: clathrin binding%2C structural molecule activity%2C binding%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%3B LOCATED IN: membrane coat%2C COPI vesicle coat%3B EXPRESSED IN: male gametophyte%2C guard cell%3B EXPRESSED DURING: M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Coatomer%2C beta subunit%2C C-terminal (InterPro:IPR011710)%2C Armadillo-like helical (InterPro:IPR011989)%2C Coatomer%2C beta subunit (InterPro:IPR016460)%2C Armadillo-type fold (InterPro:IPR016024)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C N-terminal (InterPro:IPR002553)%3B BEST Arabidopsis thaliana protein match is: Coatomer%2C beta subunit (TAIR:AT4G31490.1)%3B Has 2798 Blast hits to 2724 proteins in 309 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1200%3B Fungi - 640%3B Plants - 392%3B Viruses - 0%3B Other Eukaryotes - 566 (source: NCBI BLink).
AT5G03030 gene 4.80 5:00708318 Chaperone DnaJ-domain superfamily protein%3B FUNCTIONS IN: heat shock protein binding%3B INVOLVED IN: protein folding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ%2C N-terminal (InterPro:IPR001623)%3B BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G35795.1)%3B Has 904 Blast hits to 904 proteins in 304 species: Archae - 0%3B Bacteria - 188%3B Metazoa - 208%3B Fungi - 196%3B Plants - 87%3B Viruses - 5%3B Other Eukaryotes - 220 (source: NCBI BLink).
AT5G09460 gene 4.79 5:02943738 sequence-specific DNA binding transcription factors%3Btranscription regulators%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%3B BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors%3Btranscription regulators (TAIR:AT5G64340.1)%3B Has 178 Blast hits to 178 proteins in 26 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 6%3B Fungi - 1%3B Plants - 159%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink).
AT5G07720 gene XXT3 4.79 5:02455593 Galactosyl transferase GMA12/MNN10 family protein%3B FUNCTIONS IN: transferase activity%2C transferring glycosyl groups%2C transferase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: integral to membrane%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630)%3B BEST Arabidopsis thaliana protein match is: xyloglucan xylosyltransferase 5 (TAIR:AT1G74380.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G41030 gene 4.75 5:16428706 TCP family transcription factor %3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-domain family protein 20 (TAIR:AT3G27010.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G43910 gene 4.75 1:16655884 P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: nucleoside-triphosphatase activity%2C ATPase activity%2C nucleotide binding%2C ATP binding%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G05380.1)%3B Has 21538 Blast hits to 20075 proteins in 2875 species: Archae - 1244%3B Bacteria - 8173%3B Metazoa - 2975%3B Fungi - 2572%3B Plants - 2413%3B Viruses - 32%3B Other Eukaryotes - 4129 (source: NCBI BLink).
AT5G12910 gene 4.74 5:04077162 Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleosome%3B EXPRESSED IN: shoot apex%2C root%2C inflorescence%2C flower%2C leaf%3B EXPRESSED DURING: seedling growth%2C LP.02 two leaves visible%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G12420 gene 4.74 5:04024286 O-acyltransferase (WSD1-like) family protein%3B CONTAINS InterPro DOMAIN/s: O-acyltransferase%2C WSD1%2C C-terminal (InterPro:IPR009721)%2C O-acyltransferase%2C WSD1%2C N-terminal (InterPro:IPR004255)%3B BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT5G16350.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G04770 gene CAT6 4.70 5:01378621 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode%2C Meloidogyne incognita. Localized in the plasma membrane.
AT1G72140 gene 4.69 1:27141765 Major facilitator superfamily protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: oligopeptide transport%2C response to nematode%3B LOCATED IN: plasma membrane%2C membrane%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G22540.1)%3B Has 7231 Blast hits to 7080 proteins in 1330 species: Archae - 0%3B Bacteria - 3541%3B Metazoa - 585%3B Fungi - 456%3B Plants - 2171%3B Viruses - 0%3B Other Eukaryotes - 478 (source: NCBI BLink).
AT5G39860 gene PRE1 4.63 5:15957368 Encodes PRE1 (PACLOBUTRAZOL RESISTANCE1). PRE1 and IBH1 form a pair of antagonistic HLH/bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation. BNQ1 is directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time.
AT5G40160 gene EMB506 4.60 5:16062479 Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality.
AT5G42070 gene 4.57 5:16818984 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G08630 gene 4.55 5:02798010 DDT domain-containing protein%3B CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501)%2C DDT domain (InterPro:IPR004022)%2C DDT domain%2C subgroup (InterPro:IPR018500)%2C WSTF/Acf1/Cbp146 (InterPro:IPR013136)%3B Has 7496 Blast hits to 4698 proteins in 418 species: Archae - 4%3B Bacteria - 337%3B Metazoa - 2683%3B Fungi - 719%3B Plants - 380%3B Viruses - 89%3B Other Eukaryotes - 3284 (source: NCBI BLink).
AT5G08030 gene GDPD6 4.54 5:02575025 Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.
AT5G07470 gene PMSR3 4.49 5:02362524 ubiquitous enzyme that repairs oxidatively damaged proteins
AT2G38170 gene CAX1 4.40 2:15989083 Encodes a high affinity vacuolar calcium antiporter. The residue His 338 is critical to Ca2+ transport activity. Disruption of CAX1 reduces manganese and zinc of shoot tissue and results in a decrease in the activity of vacuolar V-type proton ATPase.
AT2G25340 gene VAMP712 4.39 2:10792664 Member of Synaptobrevin-like AtVAMP7C%2C v-SNARE protein family.
AT1G72950 gene 4.37 1:27444415 Disease resistance protein (TIR-NBS class)%3B FUNCTIONS IN: transmembrane receptor activity%2C ATP binding%3B INVOLVED IN: signal transduction%2C apoptosis%2C defense response%2C innate immune response%3B LOCATED IN: intrinsic to membrane%3B EXPRESSED IN: stem%2C root%3B CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182)%2C Disease resistance protein (InterPro:IPR000767)%2C Toll-Interleukin receptor (InterPro:IPR000157)%3B BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72940.1)%3B Has 5085 Blast hits to 4944 proteins in 192 species: Archae - 0%3B Bacteria - 94%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4991%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G07020 gene 4.33 5:02180501 proline-rich family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G01150 gene 4.31 4:00493546 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%2C plastoglobule%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1)%3B Has 323 Blast hits to 323 proteins in 59 species: Archae - 0%3B Bacteria - 107%3B Metazoa - 0%3B Fungi - 0%3B Plants - 206%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink).
AT5G13190 gene GILP 4.30 5:04204085 Encodes a plasma membrane localized LITAF domain protein that interacts with LSD1 and acts as a negative regulation of hypersensitive cell death.
AT5G01530 gene LHCB4.1 4.29 5:00208866 light harvesting complex photosystem II (LHCB4.1)%3B FUNCTIONS IN: chlorophyll binding%3B INVOLVED IN: response to blue light%2C response to red light%2C response to far red light%2C photosynthesis%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344)%3B BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G05400 gene 4.29 5:01597351 LRR and NB-ARC domains-containing disease resistance protein%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: N-terminal protein myristoylation%2C defense response%2C apoptosis%3B LOCATED IN: chloroplast%3B EXPRESSED IN: stem%2C root%3B CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182)%2C Disease resistance protein (InterPro:IPR000767)%3B BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G63020.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G22520 gene 4.29 4:11858614 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein%3B FUNCTIONS IN: lipid binding%3B INVOLVED IN: lipid transport%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140)%2C Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612)%2C Plant lipid transfer protein/hydrophobic protein%2C helical domain (InterPro:IPR013770)%3B BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G22610.1)%3B Has 641 Blast hits to 635 proteins in 53 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 641%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G74240 gene 4.20 1:27917249 Mitochondrial substrate carrier family protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: transport%2C mitochondrial transport%2C transmembrane transport%3B LOCATED IN: mitochondrial inner membrane%2C membrane%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067)%2C Mitochondrial substrate carrier (InterPro:IPR001993)%2C Mitochondrial substrate/solute carrier (InterPro:IPR018108)%3B BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2)%3B Has 26278 Blast hits to 14077 proteins in 462 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 11478%3B Fungi - 7540%3B Plants - 4581%3B Viruses - 0%3B Other Eukaryotes - 2673 (source: NCBI BLink).
AT5G08770 gene 4.17 5:02855638 unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G14640 gene SK13 4.13 5:04718994 shaggy-like kinase 13 (SK13)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C ATP binding%3B INVOLVED IN: response to salt stress%2C hyperosmotic response%3B LOCATED IN: cytosol%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G72880 gene 4.11 1:27423385 Survival protein SurE-like phosphatase/nucleotidase%3B FUNCTIONS IN: hydrolase activity%2C acid phosphatase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828)%3B BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT4G14930.1)%3B Has 4548 Blast hits to 4546 proteins in 1570 species: Archae - 197%3B Bacteria - 3352%3B Metazoa - 2%3B Fungi - 8%3B Plants - 92%3B Viruses - 0%3B Other Eukaryotes - 897 (source: NCBI BLink).
AT5G42340 gene PUB15 4.09 5:16927893 Plant U-Box 15 (PUB15)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: protein ubiquitination%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1)%3B Has 7951 Blast hits to 5407 proteins in 313 species: Archae - 0%3B Bacteria - 45%3B Metazoa - 2582%3B Fungi - 655%3B Plants - 3768%3B Viruses - 3%3B Other Eukaryotes - 898 (source: NCBI BLink).
AT5G10330 gene HPA1 4.07 5:03247847 Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.
AT1G72330 gene ALAAT2 4.00 1:27233418 Encodes for alanine aminotransferase ALAAT2.
AT1G74590 gene GSTU10 4.00 1:28023627 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
AT5G60150 gene 3.97 5:24217982 unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G67810 gene SUFE2 3.95 1:25426234 Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.
AT2G19910 gene 3.95 2:08595605 RNA-dependent RNA polymerase family protein%3B CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase%2C eukaryotic-type (InterPro:IPR007855)%3B BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase family protein (TAIR:AT2G19920.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT5G10690 gene 3.94 5:03373640 pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Cystathionine beta-synthase%2C core (InterPro:IPR000644)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G51000 gene 3.92 3:18945025 alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: epoxide hydrolase activity%2C catalytic activity%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639)%2C Alpha/beta hydrolase fold-1 (InterPro:IPR000073)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1)%3B Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110%3B Bacteria - 13477%3B Metazoa - 828%3B Fungi - 558%3B Plants - 614%3B Viruses - 8%3B Other Eukaryotes - 3523 (source: NCBI BLink).
AT1G73480 gene 3.92 1:27628678 alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: hydrolase activity%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18360.1)%3B Has 6390 Blast hits to 6380 proteins in 1730 species: Archae - 36%3B Bacteria - 4672%3B Metazoa - 140%3B Fungi - 153%3B Plants - 452%3B Viruses - 63%3B Other Eukaryotes - 874 (source: NCBI BLink).
AT1G73330 gene DR4 3.90 1:27568714 encodes a plant-specific protease inhibitor-like protein whose transcript level in root disappears in response to progressive drought stress. The decrease in transcript level is independent from abscisic acid level.
AT5G40350 gene MYB24 3.88 5:16138544 Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.
AT4G15910 gene DI21 3.87 4:09028262 encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants.
AT3G45720 gene 3.87 3:16785046 Major facilitator superfamily protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: oligopeptide transport%3B LOCATED IN: membrane%3B EXPRESSED IN: stem%2C root%3B CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45680.1)%3B Has 4336 Blast hits to 4242 proteins in 649 species: Archae - 2%3B Bacteria - 1337%3B Metazoa - 453%3B Fungi - 208%3B Plants - 2079%3B Viruses - 0%3B Other Eukaryotes - 257 (source: NCBI BLink).
AT5G17230 gene PSY 3.86 5:05659554 Encodes phytoene synthase.
AT1G60990 gene 3.86 1:22462026 Encodes a chloroplast-localized COG0354 protein that requires folate for its function in Fe/S cluster biogenesis.
AT2G42560 gene 3.83 2:17714638 late embryogenesis abundant domain-containing protein / LEA domain-containing protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: seed%3B EXPRESSED DURING: seedling growth%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 4 (InterPro:IPR004238)%3B BEST Arabidopsis thaliana protein match is: embryonic cell protein 63 (TAIR:AT2G36640.1)%3B Has 15488 Blast hits to 9741 proteins in 1566 species: Archae - 82%3B Bacteria - 6528%3B Metazoa - 2119%3B Fungi - 827%3B Plants - 2067%3B Viruses - 138%3B Other Eukaryotes - 3727 (source: NCBI BLink).
AT1G27140 gene GSTU14 3.81 1:09427804 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
AT5G13640 gene PDAT 3.80 5:04392937 arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT)
AT5G54220 gene 3.77 5:22011297 Encodes a defensin-like (DEFL) family protein.
AT1G71730 gene 3.76 1:26985969 unknown protein%3B Has 52 Blast hits to 52 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 41%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink).
AT1G73490 gene 3.74 1:27633183 RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: nucleolin like 2 (TAIR:AT3G18610.1)%3B Has 124 Blast hits to 108 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 124%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G08330 gene TCP11 3.72 5:02680401 TCP family transcription factor %3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G23280.1)%3B Has 954 Blast hits to 946 proteins in 163 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 29%3B Fungi - 0%3B Plants - 913%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink).
AT4G04220 gene RLP46 3.72 4:02033168 receptor like protein 46 (RLP46)%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: signal transduction%2C defense response%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Leucine-rich repeat%2C typical subtype (InterPro:IPR003591)%2C Leucine-rich repeat-containing N-terminal domain%2C type 2 (InterPro:IPR013210)%2C Leucine-rich repeat (InterPro:IPR001611)%3B BEST Arabidopsis thaliana protein match is: receptor like protein 12 (TAIR:AT1G71400.1)%3B Has 134299 Blast hits to 33174 proteins in 1147 species: Archae - 55%3B Bacteria - 10381%3B Metazoa - 36724%3B Fungi - 1470%3B Plants - 75311%3B Viruses - 4%3B Other Eukaryotes - 10354 (source: NCBI BLink).
AT5G23010 gene MAM1 3.72 5:07703041 Encodes a methylthioalkylmalate synthase%2C catalyzes the condensation reactions of the first two rounds of methionine chain elongation in the biosynthesis of methionine-derived glucosinolates.
AT3G56790 gene 3.71 3:21033777 RNA splicing factor-related%3B CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881)%3B BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1)%3B Has 356 Blast hits to 326 proteins in 158 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 124%3B Fungi - 116%3B Plants - 74%3B Viruses - 0%3B Other Eukaryotes - 42 (source: NCBI BLink).
AT1G21970 gene LEC1 3.70 1:07727577 Transcriptional activator of genes required for both embryo maturation and cellular differentiation. Sequence is similar to HAP3 subunit of the CCAAT-box binding factor. HAP3 subunit is divided into three domains: an amino-terminal A domain%2C a central B domain%2C and a carboxyl-terminal C domain. LEC1 shared high similarity with other HAP3 homologs only in central%2C B domain. LEC1 is required for the specification of cotyledon identity and the completion of embryo maturation. It was sufficient to induce embryogenic programs in vegetative cells%2C suggesting that LEC1 is a major embryonic regulator that mediates the switch between embryo and vegetative development. Mutants are desiccation intolerant%2C have trichomes on cotyledons and exhibit precocious meristem activation. Levels of the ABI3 and FUS3 transcripts were significantly reduced in developing siliques of the lec1-1 mutants%2C indicating that LEC1 down-regulates FUS3 and ABI3.When LEC1 is overexpressed from an inducible promoter%2C the expression of numerous genes involved in fatty acid biosynthesis is increased suggesting a role in positive regulation of FA biosynthesis.
AT4G23620 gene 3.68 4:12314583 Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain%3B FUNCTIONS IN: cobalt ion binding%2C zinc ion binding%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C intracellular%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L25%2C N-terminal (InterPro:IPR020055)%2C Ribosomal protein L25 (InterPro:IPR001021)%2C Ribosomal protein L25%2C beta domain (InterPro:IPR020057)%2C Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain (InterPro:IPR011035)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain (TAIR:AT5G66860.1)%3B Has 3887 Blast hits to 3887 proteins in 1083 species: Archae - 0%3B Bacteria - 2293%3B Metazoa - 0%3B Fungi - 0%3B Plants - 72%3B Viruses - 0%3B Other Eukaryotes - 1522 (source: NCBI BLink).
AT5G10150 gene 3.68 5:03181938 FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369)%2C Uncharacterised conserved protein UCP031043 (InterPro:IPR021182)%3B BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G08100 gene ASPGA1 3.67 5:02592976 Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia.
AT2G33850 gene 3.66 2:14320865 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1)%3B Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6%3B Bacteria - 52%3B Metazoa - 135%3B Fungi - 96%3B Plants - 73%3B Viruses - 2%3B Other Eukaryotes - 2689 (source: NCBI BLink).
AT5G08650 gene 3.64 5:02806302 Small GTP-binding protein%3B FUNCTIONS IN: GTP binding%2C translation elongation factor activity%2C GTPase activity%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225)%2C Translation elongation factor EFTu/EF1A%2C domain 2 (InterPro:IPR004161)%2C Translation elongation factor EFG/EF2%2C C-terminal (InterPro:IPR000640)%2C GTP-binding protein LepA%2C C-terminal (InterPro:IPR013842)%2C Protein synthesis factor%2C GTP-binding (InterPro:IPR000795)%2C GTP-binding protein LepA (InterPro:IPR006297)%2C Elongation factor G/III/V (InterPro:IPR009022)%2C Translation elongation/initiation factor/Ribosomal%2C beta-barrel (InterPro:IPR009000)%3B BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT2G22480 gene PFK5 3.62 2:09545283 phosphofructokinase 5 (PFK5)%3B CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004)%2C Phosphofructokinase (InterPro:IPR000023)%3B BEST Arabidopsis thaliana protein match is: phosphofructokinase 4 (TAIR:AT5G61580.1)%3B Has 7923 Blast hits to 7389 proteins in 2127 species: Archae - 28%3B Bacteria - 5127%3B Metazoa - 660%3B Fungi - 395%3B Plants - 392%3B Viruses - 2%3B Other Eukaryotes - 1319 (source: NCBI BLink).
AT5G09300 gene 3.60 5:02884179 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor%2C 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Dehydrogenase%2C E1 component (InterPro:IPR001017)%3B BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G21400.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT2G35480 gene 3.57 2:14910343 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 9 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32260.1)%3B Has 47 Blast hits to 47 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 47%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G05660 gene NFXL2 3.55 5:01690571 Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.
AT1G73740 gene 3.53 1:27734024 UDP-Glycosyltransferase superfamily protein%3B FUNCTIONS IN: transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: lipid glycosylation%2C biosynthetic process%2C carbohydrate metabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl transferase%2C family 28 (InterPro:IPR004276)%2C Glycosyl transferase%2C family 28%2C C-terminal (InterPro:IPR007235)%3B Has 7866 Blast hits to 7866 proteins in 2456 species: Archae - 0%3B Bacteria - 5567%3B Metazoa - 4%3B Fungi - 2%3B Plants - 34%3B Viruses - 0%3B Other Eukaryotes - 2259 (source: NCBI BLink).
AT5G16450 gene 3.50 5:05373820 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase%3B FUNCTIONS IN: ribonuclease inhibitor activity%3B INVOLVED IN: regulation of RNA metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (InterPro:IPR005493)%2C Ribonuclease E inhibitor RraA (InterPro:IPR010203)%3B BEST Arabidopsis thaliana protein match is: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (TAIR:AT3G02770.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT3G27920 gene MYB0 3.49 3:10361790 Encodes GL1%2C a Myb-like protein that is required for induction of trichome development. Interacts with JAZ and DELLA proteins to regulate trichome initiation.
AT5G18010 gene SAUR19 3.45 5:05962773 Encodes SAUR19 (small auxin up RNA 19). Note that TAIR nomenclature is based on Plant Mol Biol. 2002%2C 49:373-85 (PMID:12036261). In Planta (2011) 233:1223%E2%80%931235 (PMID:21327815)%2C At5g18010 is SAUR24.
AT1G74280 gene 3.45 1:27929643 alpha/beta-Hydrolases superfamily protein%3B CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74290.1)%3B Has 883 Blast hits to 882 proteins in 201 species: Archae - 12%3B Bacteria - 418%3B Metazoa - 2%3B Fungi - 68%3B Plants - 310%3B Viruses - 0%3B Other Eukaryotes - 73 (source: NCBI BLink).
AT4G10890 gene 3.43 4:06688833 unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G47960 gene C/VIF1 3.41 1:17681157 Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism%2C stress responses and sugar signaling. This protein may inhibit their activity.
AT1G28510 gene 3.40 1:10023817 Optic atrophy 3 protein (OPA3)%3B CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754)%3B BEST Arabidopsis thaliana protein match is: Optic atrophy 3 protein (OPA3) (TAIR:AT3G58150.1)%3B Has 397 Blast hits to 393 proteins in 164 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 155%3B Fungi - 114%3B Plants - 80%3B Viruses - 0%3B Other Eukaryotes - 48 (source: NCBI BLink).
AT2G42380 gene BZIP34 3.40 2:17646857 Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.
AT3G23970 gene 3.40 3:08660447 F-box family protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G23950.1)%3B Has 428 Blast hits to 427 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 427%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).
AT5G21105 gene 3.39 5:07172604 Plant L-ascorbate oxidase%3B FUNCTIONS IN: oxidoreductase activity%2C L-ascorbate oxidase activity%2C copper ion binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cell wall%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Multicopper oxidase%2C type 2 (InterPro:IPR011706)%2C Multicopper oxidase%2C type 3 (InterPro:IPR011707)%2C Cupredoxin (InterPro:IPR008972)%2C Multicopper oxidase%2C copper-binding site (InterPro:IPR002355)%2C Multicopper oxidase%2C type 1 (InterPro:IPR001117)%2C L-ascorbate oxidase%2C plants (InterPro:IPR017760)%3B BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1)%3B Has 10302 Blast hits to 9343 proteins in 1616 species: Archae - 73%3B Bacteria - 4566%3B Metazoa - 590%3B Fungi - 3309%3B Plants - 1352%3B Viruses - 0%3B Other Eukaryotes - 412 (source: NCBI BLink).
AT1G33265 gene 3.38 1:12066595 Transmembrane proteins 14C%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%2C membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136%2C Transmembrane (InterPro:IPR005349)%3B Has 188 Blast hits to 188 proteins in 62 species: Archae - 0%3B Bacteria - 34%3B Metazoa - 41%3B Fungi - 4%3B Plants - 100%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT5G08320 gene 3.37 5:02677037 CONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein%2C C-terminal (InterPro:IPR019370)%3B Has 149 Blast hits to 149 proteins in 78 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 79%3B Fungi - 0%3B Plants - 35%3B Viruses - 0%3B Other Eukaryotes - 35 (source: NCBI BLink).
AT5G43500 gene ARP9 3.36 5:17469490 encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.
AT4G29270 gene 3.36 4:14423627 HAD superfamily%2C subfamily IIIB acid phosphatase %3B FUNCTIONS IN: acid phosphatase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519)%2C Vegetative storage protein/acid phosphatase (InterPro:IPR014403)%2C Acid phosphatase%2C plant (InterPro:IPR010028)%3B BEST Arabidopsis thaliana protein match is: HAD superfamily%2C subfamily IIIB acid phosphatase (TAIR:AT4G29260.1)%3B Has 719 Blast hits to 714 proteins in 195 species: Archae - 0%3B Bacteria - 324%3B Metazoa - 0%3B Fungi - 0%3B Plants - 383%3B Viruses - 0%3B Other Eukaryotes - 12 (source: NCBI BLink).
AT3G55620 gene eIF6A 3.35 3:20634057 embryo defective 1624 (emb1624)%3B FUNCTIONS IN: ribosome binding%2C translation initiation factor activity%3B INVOLVED IN: translational initiation%2C embryo development ending in seed dormancy%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769)%3B BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1)%3B Has 941 Blast hits to 941 proteins in 349 species: Archae - 255%3B Bacteria - 0%3B Metazoa - 235%3B Fungi - 146%3B Plants - 134%3B Viruses - 0%3B Other Eukaryotes - 171 (source: NCBI BLink).
AT2G26170 gene CYP711A1 3.35 2:11140809 Encodes a protein with similarity to thromboxane-A synthase%2C member of the CYP711A cytochrome P450 family. MAX1 is a specific repressor of vegetative axillary buds generated by the axillary meristem. Expressed in vascular traces in the rosette stem and axillary buds throughout plant development. Mutants have increased axillary branches. Along with MAX3%2C4 thought to mediate control of shoot branching via synthesis of a signal molecule which is transported over long distance mediated by MAX2. cDNA supports the existence of the longer transcript predicted for this locus%2C no cDNA isolated for shorter transcript. MAX1 downregulates 11 genes involved in flavonoid pathway (CHS%2C CHI%2C F3H%2C F3'H%2C FLS%2C DFR%2C ANS%2C UFGT%2C RT%2C AAC and GST).
AT5G07250 gene RBL3 3.34 5:02274260 RHOMBOID-like protein 3 (RBL3)%3B FUNCTIONS IN: serine-type endopeptidase activity%3B LOCATED IN: integral to membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S54%2C rhomboid (InterPro:IPR002610)%3B BEST Arabidopsis thaliana protein match is: RHOMBOID-like 2 (TAIR:AT1G63120.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT2G46900 gene 3.34 2:19269558 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix%2C Nulp1-type (InterPro:IPR006994)%3B Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2%3B Bacteria - 151%3B Metazoa - 913%3B Fungi - 372%3B Plants - 141%3B Viruses - 47%3B Other Eukaryotes - 1303 (source: NCBI BLink).
AT1G15980 gene PnsB1 3.33 1:05489145 encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex%2C involved in cyclic electron flow around photosystem I to produce ATP.
AT5G18020 gene SAUR20 3.32 5:05966183 SAUR-like auxin-responsive protein family %3B CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676)%3B BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18080.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT3G48220 gene 3.32 3:17852284 BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G28223.1)%3B Has 107 Blast hits to 106 proteins in 3 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 107%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
GO domain Definition P-value
carotenoid biosynthetic process biological_process "The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail." [GOC:go_curators] 1.12e-02