AT5G13470
gene
16.42
5:04318460
unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G12850
gene
14.45
5:04056086
CCCH-type zinc finger protein with ARM repeat domain%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT2G41900.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G14620
gene
DRM2
12.03
5:04715105
A putative DNA methyltransferase with rearranged catalytic domains%3B similar to mammalian DNMT3 methyltransferases%3B contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.
AT5G13170
gene
SAG29
11.46
5:04181042
Encodes a member of the SWEET sucrose efflux transporter family proteins.
AT5G13680
gene
ABO1
11.28
5:04410314
A subunit of Elongator%2C a histone acetyl transferase complex%2C consisting of six subunits (ELP1%E2%80%93ELP6)%2C that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes%2C encoding homologs of the yeast Elongator subunits ELP1%2C ELP3 (histone acetyl transferase)%2C and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Mutants have no ncm5U (5-carbamoylmethyluridine).
AT5G13290
gene
CRN
9.74
5:04252842
Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19%2C a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels.
AT5G14100
gene
ABCI11
9.09
5:04549438
member of NAP subfamily
AT5G14570
gene
NRT2.7
8.91
5:04695084
Encodes ATNRT2.7%2C a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.
AT5G14290
gene
8.82
5:04612097
Mitochondrial ribosomal protein L37%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L37%2C mitochondrial (InterPro:IPR013870)%3B BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L37 (TAIR:AT3G01740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G12370
gene
SEC10
8.80
5:04002742
exocyst complex component sec10 (SEC10)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: exocytosis%2C vesicle docking%3B LOCATED IN: plasma membrane%2C membrane%2C exocyst%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976)%3B Has 527 Blast hits to 483 proteins in 172 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 178%3B Fungi - 247%3B Plants - 59%3B Viruses - 0%3B Other Eukaryotes - 37 (source: NCBI BLink).
AT5G13220
gene
JAZ10
8.75
5:04218786
Plants overexpressing At5g13220.3%2C but not At5g13220.1 showed enhanced insensitivity to MeJa.
AT5G13720
gene
8.20
5:04427783
Uncharacterised protein family (UPF0114)%3B LOCATED IN: chloroplast%2C chloroplast inner membrane%2C chloroplast envelope%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114%2C plant (InterPro:IPR016804)%2C Uncharacterised protein family UPF0114 (InterPro:IPR005134)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G17490
gene
RGL3
8.03
5:05763989
DELLA subfamily member involved in GA signal transduction
AT5G13520
gene
7.46
5:04341948
peptidase M1 family protein%3B FUNCTIONS IN: metallopeptidase activity%2C binding%2C zinc ion binding%3B INVOLVED IN: proteolysis%2C leukotriene biosynthetic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M1%2C membrane alanine aminopeptidase (InterPro:IPR001930)%2C Peptidase M1%2C membrane alanine aminopeptidase%2C N-terminal (InterPro:IPR014782)%2C Peptidase M1%2C leukotriene A4 hydrolase%2C aminopeptidase C-terminal (InterPro:IPR015211)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G12210
gene
RGTB1
7.33
5:03947022
RAB geranylgeranyl transferase beta subunit 1 (RGTB1)%3B FUNCTIONS IN: catalytic activity%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930)%2C Prenyltransferase/squalene oxidase (InterPro:IPR001330)%3B BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G14310
gene
CXE16
7.09
5:04615163
carboxyesterase 16 (CXE16)%3B FUNCTIONS IN: hydrolase activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Lipase%2C GDXG%2C active site (InterPro:IPR002168)%2C Alpha/beta hydrolase fold-3 (InterPro:IPR013094)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G27320.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G13730
gene
SIG4
7.03
5:04429095
Encodes sigma 4 factor%2C involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.
AT5G14220
gene
HEMG2
6.93
5:04582629
Encodes PPO2%2C a putative protoporphyrinogen oxidase based on sequence homology. Also known as MEE61 (maternal effect embryo arrest 61). mee61 mutant shows arrested endosperm development.
AT5G13810
gene
6.85
5:04455148
Glutaredoxin family protein%3B FUNCTIONS IN: electron carrier activity%2C protein disulfide oxidoreductase activity%3B INVOLVED IN: cell redox homeostasis%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335)%2C Glutaredoxin (InterPro:IPR002109)%2C Thioredoxin-like fold (InterPro:IPR012336)%3B BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G13870
gene
XTH5
6.85
5:04474922
EXGT-A4%2C endoxyloglucan transferase%2C
AT5G13490
gene
AAC2
6.69
5:04335272
Encodes mitochondrial ADP/ATP carrier
AT5G15020
gene
SNL2
6.63
5:04859127
Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).
AT5G14090
gene
6.62
5:04547202
unknown protein%3B Has 56 Blast hits to 56 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 46%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink).
AT5G18110
gene
NCBP
6.57
5:05988744
novel cap-binding protein (NCBP)%3B FUNCTIONS IN: RNA binding%2C translation initiation factor activity%3B INVOLVED IN: translational initiation%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040)%2C Eukaryotic translation initiation factor 4E (eIF-4E)%2C conserved site (InterPro:IPR019770)%3B BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G15220
gene
6.41
5:04941237
Ribosomal protein L27 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C intracellular%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L27 (InterPro:IPR001684)%2C Ribosomal protein L27%2C conserved site (InterPro:IPR018261)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L27 family protein (TAIR:AT2G16930.3)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G14320
gene
EMB3137
6.39
5:04617218
Ribosomal protein S13/S18 family%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%2C nucleic acid binding%3B INVOLVED IN: translation%3B LOCATED IN: small ribosomal subunit%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S13%2C bacterial-type (InterPro:IPR019980)%2C Ribosomal protein S13-like%2C H2TH (InterPro:IPR010979)%2C Ribosomal protein S13%2C conserved site (InterPro:IPR018269)%2C Ribosomal protein S13 (InterPro:IPR001892)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G77750.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G13240
gene
6.14
5:04225005
transcription regulators%3B FUNCTIONS IN: transcription regulator activity%3B INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter%3B LOCATED IN: nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257)%2C RNA polymerase III transcriptional repressor%2C MAF1 (InterPro:IPR017152)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G12350
gene
6.11
5:03995310
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain%3B FUNCTIONS IN: chromatin binding%2C zinc ion binding%2C Ran GTPase binding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation%2C RCC1 (InterPro:IPR000408)%2C Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%2C Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091)%2C Zinc finger%2C FYVE-type (InterPro:IPR000306)%2C Zinc finger%2C FYVE-related (InterPro:IPR017455)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%3B BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1)%3B Has 23773 Blast hits to 8858 proteins in 456 species: Archae - 73%3B Bacteria - 2346%3B Metazoa - 9625%3B Fungi - 1299%3B Plants - 3027%3B Viruses - 3%3B Other Eukaryotes - 7400 (source: NCBI BLink).
AT5G11060
gene
KNAT4
5.98
5:03509833
A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5)%2C with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined%2C but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis%3B GUS expression pattern started at the elongation zone%2C predominantly in the phloem and pericycle cells%2C extending to endodermis toward the base of the root.
AT1G13090
gene
CYP71B28
5.83
1:04461738
putative cytochrome P450
AT4G38640
gene
5.51
4:18059614
Plasma-membrane choline transporter family protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G15240
gene
5.50
5:04947577
Transmembrane amino acid transporter family protein%3B CONTAINS InterPro DOMAIN/s: Amino acid transporter%2C transmembrane (InterPro:IPR013057)%3B BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1)%3B Has 5045 Blast hits to 4985 proteins in 317 species: Archae - 15%3B Bacteria - 153%3B Metazoa - 1796%3B Fungi - 1055%3B Plants - 1275%3B Viruses - 9%3B Other Eukaryotes - 742 (source: NCBI BLink).
AT5G13980
gene
5.48
5:04508406
Glycosyl hydrolase family 38 protein%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: mannose metabolic process%2C carbohydrate metabolic process%3B LOCATED IN: apoplast%2C cell wall%2C plasma membrane%2C vacuole%2C plant-type cell wall%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013)%2C Glycoside hydrolase/deacetylase%2C beta/alpha-barrel (InterPro:IPR011330)%2C Glycoside hydrolase%2C family 38%2C central domain (InterPro:IPR015341)%2C Glycoside hydrolase%2C family 38%2C core (InterPro:IPR000602)%2C Glycosyl hydrolases 38%2C C-terminal (InterPro:IPR011682)%3B BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT3G26720.1)%3B Has 1172 Blast hits to 1119 proteins in 194 species: Archae - 7%3B Bacteria - 147%3B Metazoa - 695%3B Fungi - 22%3B Plants - 164%3B Viruses - 0%3B Other Eukaryotes - 137 (source: NCBI BLink).
AT5G13180
gene
NAC083
5.43
5:04196256
Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.
AT3G26040
gene
5.38
3:09519741
HXXXD-type acyl-transferase family protein%3B FUNCTIONS IN: transferase activity%2C transferring acyl groups other than amino-acyl groups%2C transferase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: root%3B CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480)%3B BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1)%3B Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 58%3B Plants - 2353%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).
AT5G12170
gene
CLT3
5.35
5:03931349
Encodes one of the CRT-Like transporters (CLT1/AT5G19380%2C CLT2/AT4G24460%2C CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive%2C glutathione(GSH)-deficient%2C and hypersensitive to Phytophthora infection.
AT1G64563
gene
5.13
1:23975085
other_RNA
