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Show all genes, phenotypes and metabolites for which the QTL profile correlates with that of the query profile above the set cut-off, the query trait is in the first row. Strongly correlating QTL profiles could indicate common regulation.
Trait ID (count=24) Type Name Pearson's Correlation Coefficient Position Description
AT4G22320 gene 1.00 4:11792813 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1)%3B Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33%3B Bacteria - 806%3B Metazoa - 2454%3B Fungi - 831%3B Plants - 279%3B Viruses - 151%3B Other Eukaryotes - 4399 (source: NCBI BLink).
AT4G22220 gene ISU1 0.96 4:11759103 Encodes a mitochondrial protein similar to E.coli IscU. In bacteria%2C IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster%2Cwhich is subsequently transferred to a target apoprotein.
AT4G22910 gene FZR2 0.96 4:12012408 FIZZY-related 2 (FZR2)%3B FUNCTIONS IN: signal transducer activity%3B INVOLVED IN: trichome branching%2C signal transduction%2C DNA endoreduplication%2C cell growth%3B LOCATED IN: chloroplast%2C heterotrimeric G-protein complex%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1)%3B Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46%3B Bacteria - 6865%3B Metazoa - 16440%3B Fungi - 9775%3B Plants - 5102%3B Viruses - 0%3B Other Eukaryotes - 5230 (source: NCBI BLink).
AT4G22960 gene 0.96 4:12030020 Protein of unknown function (DUF544) %3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF544 (InterPro:IPR007518)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF544) (TAIR:AT4G11860.1)%3B Has 737 Blast hits to 425 proteins in 174 species: Archae - 0%3B Bacteria - 23%3B Metazoa - 282%3B Fungi - 261%3B Plants - 75%3B Viruses - 0%3B Other Eukaryotes - 96 (source: NCBI BLink).
AT4G22280 gene 0.95 4:11775969 F-box/RNI-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C FBD-like (InterPro:IPR006566)%2C Leucine-rich repeat 2 (InterPro:IPR013101)%3B BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G58920.1)%3B Has 1904 Blast hits to 1860 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1904%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G23070 gene RBL7 0.95 4:12090690 RHOMBOID-like protein 7 (RBL7)%3B FUNCTIONS IN: serine-type endopeptidase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: integral to membrane%3B EXPRESSED IN: root%2C pollen tube%3B CONTAINS InterPro DOMAIN/s: Peptidase S54%2C rhomboid (InterPro:IPR002610)%3B BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3)%3B Has 5309 Blast hits to 5308 proteins in 1628 species: Archae - 134%3B Bacteria - 3233%3B Metazoa - 520%3B Fungi - 126%3B Plants - 324%3B Viruses - 0%3B Other Eukaryotes - 972 (source: NCBI BLink).
AT4G22300 gene SOBER1 0.95 4:11787299 encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in Arabidopsis
AT4G21810 gene DER2.1 0.94 4:11575096 DERLIN-2.1 (DER2.1)%3B CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599)%3B BEST Arabidopsis thaliana protein match is: DERLIN-2.2 (TAIR:AT4G04860.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G21940 gene CPK15 0.94 4:11640735 member of Calcium Dependent Protein Kinase
AT4G24050 gene 0.93 4:12497055 NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C binding%2C catalytic activity%3B INVOLVED IN: oxidation reduction%2C metabolic process%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040)%2C Glucose/ribitol dehydrogenase (InterPro:IPR002347)%2C Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198)%3B BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G64590.1)%3B Has 59308 Blast hits to 59247 proteins in 3068 species: Archae - 448%3B Bacteria - 39701%3B Metazoa - 3820%3B Fungi - 3579%3B Plants - 1905%3B Viruses - 0%3B Other Eukaryotes - 9855 (source: NCBI BLink).
AT4G21230 gene CRK27 0.93 4:11319139 Encodes a cysteine-rich receptor-like protein kinase.
AT4G21750 gene ATML1 0.93 4:11555039 Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost%2C epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2%2C another L1-specific gene%2C suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.
AT4G21800 gene QQT2 0.93 4:11572789 Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370).
AT4G21960 gene PRXR1 0.93 4:11646109 Encodes AT4g21960 (AT4g21960/T8O5_170).
AT4G21720 gene 0.93 4:11542430 unknown protein%3B Has 2692 Blast hits to 975 proteins in 186 species: Archae - 4%3B Bacteria - 460%3B Metazoa - 658%3B Fungi - 93%3B Plants - 1089%3B Viruses - 100%3B Other Eukaryotes - 288 (source: NCBI BLink).
AT4G21760 gene BGLU47 0.93 4:11561123 beta-glucosidase 47 (BGLU47)%3B FUNCTIONS IN: cation binding%2C hydrolase activity%2C hydrolyzing O-glycosyl compounds%2C catalytic activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C family 1 (InterPro:IPR001360)%2C Glycoside hydrolase%2C family 1%2C active site (InterPro:IPR018120)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%3B BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1)%3B Has 11354 Blast hits to 11023 proteins in 1477 species: Archae - 142%3B Bacteria - 7853%3B Metazoa - 716%3B Fungi - 199%3B Plants - 1433%3B Viruses - 0%3B Other Eukaryotes - 1011 (source: NCBI BLink).
AT4G21890 gene 0.92 4:11610808 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 7 growth stages%3B Has 14 Blast hits to 14 proteins in 5 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 14%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G21390 gene B120 0.92 4:11394295 B120%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C sugar binding%2C protein kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%2C recognition of pollen%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480)%2C PAN-2 domain (InterPro:IPR013227)%2C Apple-like (InterPro:IPR003609)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C S-locus glycoprotein (InterPro:IPR000858)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1)%3B Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104%3B Bacteria - 13356%3B Metazoa - 43759%3B Fungi - 9937%3B Plants - 34742%3B Viruses - 415%3B Other Eukaryotes - 17325 (source: NCBI BLink).
AT4G23050 gene 0.92 4:12079859 PAS domain-containing protein tyrosine kinase family protein%3B FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity%2C protein kinase activity%2C signal transducer activity%3B INVOLVED IN: signal transduction%2C protein amino acid phosphorylation%2C regulation of transcription%2C DNA-dependent%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610)%2C Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C PAS fold (InterPro:IPR013767)%2C PAS (InterPro:IPR000014)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT3G06640.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G25760 gene GDU2 0.91 4:13116028 Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1)%2C At4g25760 (GDU2)%2C At5g57685 (GDU3)%2C At2g24762 (GDU4)%2C At5g24920 (GDU5)%2C At3g30725 (GDU6) and At5g38770 (GDU7).
AT4G20840 gene 0.91 4:11157916 FAD-binding Berberine family protein%3B FUNCTIONS IN: electron carrier activity%2C oxidoreductase activity%2C FAD binding%2C catalytic activity%3B LOCATED IN: apoplast%2C plasma membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: FAD-binding%2C type 2 (InterPro:IPR016166)%2C Berberine/berberine-like (InterPro:IPR012951)%2C FAD linked oxidase%2C N-terminal (InterPro:IPR006094)%3B BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2)%3B Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38%3B Bacteria - 1910%3B Metazoa - 4%3B Fungi - 1681%3B Plants - 781%3B Viruses - 0%3B Other Eukaryotes - 174 (source: NCBI BLink).
AT4G20500 gene 0.91 4:0 transposable element gene [Source:TAIR;Acc:AT4G20500]
AT4G21410 gene CRK29 0.91 4:11401711 Encodes a cysteine-rich receptor-like protein kinase.
AT2G33240 gene XID 0.90 2:14086584 member of Myosin-like proteins
GO domain Definition P-value
motor activity molecular_function "Catalysis of the generation of force resulting either in movement along a microfilament or microtubule, or in torque resulting in membrane scission, coupled to the hydrolysis of a nucleoside triphosphate." [GOC:mah, GOC:vw, ISBN:0815316194, PMID:11242086] 4.87e-02
protein serine/threonine kinase activity molecular_function "Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate." [GOC:bf] 4.87e-02
protein autophosphorylation biological_process "The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation)." [ISBN:0198506732] 4.87e-02