An example of the seed sequence from Human EST dataset follows:
>NM_003087.1|SNCG
CCTGCGAGCTCCGTCCTGCCTGCAGCAGCACAACCCTGCACACCCACCATGGATGTCTTCAAGAAGGGCT
TCTCCATCGCCAAGGAGGGCGTGGTGGGTGCGGTGGAAAAGACCAAGCAGGGGGTGACGGAAGCAGCTGA
GAAGACCAAGGAGGGGGTCATGTATGTGGGAGCCAAGACCAAGGAGAATGTTGTACAGAGCGTGACCTCA
GTGGCCGAGAAGACCAAGGAGCAGGCCAACGCGGTGAGCGAGGCTGTGGTGAGCAGCGTCAACACTGTGG
CCACCAAGACCGTGGAGGAGGCGGAGAACATCGCGGTCACCTCCGGGGTGGTGCGCAAGGAGGACTTGAG
GCCATCTGCCCCCCAACAGGAGGGTGTGGCATCCAAAGAGAAAGAGGAAGTGGCAGAGGAGGCCCAGAGT
GGGGGAGACTAGAGGGCTACAGGCCAGCGTGGATGACCTGAAGAGCGCTCCTCTGCCTTGGACACCATCC
CCTCCTAGCACAAGGAGTGCCCGCCTTGAGTGACATGCGGCTGCCCACGCTCCTGCCCTCGTCTTCCTGG
CCACCCTTGGCCTGTCCACCTGTGCTGCTGCACCAACCTCACTGCCCTCCCTCGGCCCCACCCACCCTCT
GGTCCTTCTGACCCCACTTATGCTGCTGTGAATTTTTTTTTTAAATGATTCCAAATAAAACTTGAGCCCA
CTCCTAAAAAAAAAAAAAAA
Note: This seed sequence is from Human EST dataset, please choose Homo sapiens(human) database
Another example of the seed sequence from APPLE dataset follows:
>AY789239|Prima|leaf|unknown
ATGGGTGTCTACACATTTGAGAACGAGTACACCTCTGAGATTCCACCACCAAGATTGTTC
AAGGCCTTTGTCCTCGATGCTGATAACCTCATCCCCAAGATTGCACCCCAGGCAATCAAG
CATGCTGAGATCCTTGAAGGAGACGGTGGCCCTGGAACCATCAAGAAGATCACTTTTGGT
GAAGGCAGCCAATACGGCTACGTGAAGCACAAGATCGACTCAGTTGACGAAGCAAACTAC
TCATACGCCTACACTTTGATTGAAGGAGATGCTTTGACAGACACCATTGAGAAGGTCTCT
TACGAGACCAAGTTGGTGGCATCTGGAAGTGGTTCCATCATCAAGAGTATCAGCCACTAC
CACACCAAGGGTGATGTTGAGATCAAGGAAGAGCACGTCAAGGCTGGCAAAGAGAAGGCT
CATGGTTTGTTCAAGCTTATTGAGAGCTACCTCAAGGGCCACCCCGACGCATACAACTAA
Note: This seed sequence is from apple, please choose Malus x domestica(apple tree) database
Note 1:
The description of seed sequence must follow the rule:
>sequence-name|genotype|tissue|unigene
If you don't know the genotype, tissue and unigene of your sequences, it is possible to use only sequence name or sequence accession number.
For example 1:
>sequence-name
For example 2:
If only sequence name and tissue information are
available, the name description should be like this:
>sequence-name|no|young-leaf
Note 2:
If descriptions of the sequence name, genotype and tissue contain spaces, then substitute it by "-".
For example:
>S13342|apple-tree|young-leaf
Note 3:
Please select the correct database corresponding to species!