Paste/upload input files
Sequence file / alignment file
sequence file (any format)
multiple alignment file
N.B.: Upload or paste at least 4 sequences (aligned or Unaligned)
Tree description - [optional]
InterProScan raw format - [optional]
Tools for generating input files
WUR Clustalw
WUR InterproScan
EBI InterproScan
TreeDomViewer Help
Online manual
Download manual (PDF)
Download Poster (PDF)
Publication
TreeDomViewer @ NAR
Your e-mail address
Submit to TreeDomViewer
Tree parameters
Tree formats
Phenogram
Cladogram
Angular Curvogram
Rounded Curvogram
Tree size
Height in pixel
Width in pixel
Other tree parameters
Draw tree with branch length
Add bootstrap value
Name OTU to appear on top of tree
black
azure
blue
green
marble
grey
red
yellow
turquoise
purple
pink
Branch line colour
Font parameters
sans-serif
courier
Arial
Helvetica
Western
Zapf-chancery
monospace
serif
Times
Font-family
Font size
black
green
blue
red
yellow
turquoise
purple
pink
grey
marble
azure
Font colour
Domain parameters
Alignment parameters
Align domain
Don`t align domain
Show gaps position
Prediction methods
Batch mode
Protein domains/motifs
BlastProDom
FPrintScan
HMMTigr
HMMSmart
HMMPIR
HMMPfam
HMMtop
ProfileScan
ScanRegExp
Seg
SignalP
Sigcleave
superfamily
Tmap
Coils
TMHMM
HmmPanther
Gene3D
Output format
Output format (Scalar vector/Pixel)
SVG (default)
PDF
JPEG
PNG
Submit to TreeDomViewer
© 2006 Laboratory of Bioinformatics, WUR
Version 1.1; Last Modified 11 January, 2006 by
Blaise Alako