People at the Laboratory of Bioinformatics

Jack Leunissen Professor of Bioinformatics Head of Department  
Harm Nijveen Senior scientific programmer visualisation of complex data sets  
José Muino Acuna Postdoc (PRI)
Sandra Smit Postdoc Next-Gen sequencing
Patrick Koks Postdoc eLearning development, eBiomics project  
Edouard Severing Postdoc Orthology prediction  
Ate van de Burgt PhD student Comparative genomics, miRNAs (Phytopathology)  
Hong Luo PhD student Protein repeat database  
Judith Risse PhD student Pathway reconstruction through text mining  
Ke Lin PhD student Brassica genome analysis  
Job Geerligs MSc student    
Tom de Man MSc student    
Tom Kooijman MBO student    
     
Former members of the Chair Group Bioinformatics  
Willem Stiekema Professor of Genome Informatics (CBSG)  
Roeland van Ham Associate Professor  
Christine Bunthof Postdoc Wageningen Bioinformatics Webportal  
Eric Coppoolse Postdoc Pseudomics  
Erwin Datema Postdoc EU-SOL project (PRI)  
Marijn van der Gaag Postdoc Flexworks  
Guido Kappé Postdoc BMI Protein repeats (Biochemistry, Nijmegen)  
Yiannis Kourmpetis Postdoc Evolutionary and Ecological Functional Genomics  
Arnold Kuzniar Postdoc Orthology prediction  
Daphne Rainey Postdoc Protein function prediction (w/Keygene)
Blaise Alako PhD student PhenoLink project  
Erwin Datema PhD student Annotation of the potato genome (PRI)
Anand Gavai PhD student Bayesian network analysis / MADMAX  
Arnold Kuzniar PhD student Comparative genomics, orthology prediction  
Pieter Neerincx PhD student PhenoLink project  
Ernest van Ophuizen PhD student Ontology mapping  
Xin-Ying Ren PhD student Ara-Mining (PRI)  
Edouard Severing PhD student Alternative splicing (PRI)  
Jifeng Tang PhD student EST mining and haplotyping  
Jorn Bruggeman Junior researcher Text-mining and clustering  
Ke Lin Junior researcher MADMAX database  
Lennart Backus Master student HAN Protein repeats  
Erik van der Bergh MSc student Network visualisation on tiled displays  
Paul Boekschoten MSc student Data clustering and SNP prediction  
Maarten van den Bosch MSc student ProRepeat database / Detection of imperfect repeats  
Jorn Bruggeman MSc student Text-mining and clustering  
Audrey David Master student Clermont-Ferrand Imperfect repeats in proteins  
Audrey David Master student Poitier Analysis of tandem repeats in proteins  
Adrien Defay Master student Poitier Visualisation of metabolic networks  
Roger Frehen MSc student TUE Imperfect protein repeats detection algorithms  
Thomas van Gurp MSc student Methylated AFLP webserver  
John van Hal Master student HAN Text mining / XML databases  
Xinning Hao MSc student Evolution of repeats in proteins  
Ying He MSc student Protein orthology databases  
Berend Hoekman MSc student Transcription regulation  
Klaas-Jan Hofstede MSc student Fast peptide fragment retrieval  
Frank Huiskamp MSc student GPU programming  
Machiel de Jager Master student Hanze Hogeschool Protein polymorphism  
Yihua Jia MSc student PhenoLink ChickAce Plug-in  
Vincent van Karsbergen MSc student UU Protein classification  
David Kloet MSc student Protein polymorphism  
Arun Kommadath MSc student OligoRAP microarray reannotation pipeline  
Schelto Korf MSc Student Phytoinformatics - Webportal  
Dave Lammers MSc student Detection of transcription factors (with dr. R. Geurts, MolBi)  
Martijn Liebrand Master student HAN Text mining / XML databases  
Dirk van der Linden Master student HAN Comparative fungal genomics  
Yannan (John) Liu Master student HAN MADMAX database  
Hong Luo MSc student ProRepeat database / Detection of imperfect repeats  
Mariana Matus Garcia MSc student Promoter regions (collaboration with Microbiology)  
Jordi Piquet Master student Clermont-Ferrand Simulation of next-gen sequencing data  
XiangYu Rao MSc student Primer3plus  
Elodie Salzemann Master student Clermont-Ferrand polySSR software  
Marijke van der Sijde MSc student Protein orthology clustering  
Leon Timmermans MSc student Evolution of protein repeats  
Aurélie Viars Master student Clermont-Ferrand Human peptide variation database  
Edze Westra MSc Student Ara-mining  
Harm-Jan Westra MSc student Protein domains  
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