EMBOSS explorer

needleall

Many-to-many pairwise alignments of two sequence sets (read the manual)

Only required fields are visible. (show optional fields)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:
Required section
Gap opening penalty (default is 10.0 for any sequence)
Gap extension penalty (default is 0.5 for any sequence)
Additional section
Output section
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.