SEQATOMs

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Search for identifiers in SEQATOMs

Here you can search for entries in the databases using keywords and/or sequence identifiers.
Wildcard searches are supported (but take longer): start or end your word with *. You have to supply at least 3 normal characters. Thus, "mus*" matches "muscular" and "musculus". Note that all characters inside your query are taken as literals. You may enter multiple keywords and choose to search for all keywords (option "all") or any of the keywords (option "any"). Finally, you may choose to extract the FastA sequences or the IDs only.
Note: results appear below. You may choose to open the results in a new window.
Note: PDB SEQATOMs has the most extensive sequence descriptions. See the examples in the database descriptions.

Please cite: Brandt, B.W., Heringa, J. and Leunissen, J.A.M. (2008). SEQATOMS: a web tool for identifying missing regions in PDB in sequence context. Nucleic Acids Reseach 36:W255-W259.

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Available databases    

 
Protein databases
PDB SEQATOMs, 09 Aug 2023 (masked)
PDB SEQATOMs, 14 Dec 2015 (masked)
PDB SEQATOMs, 10 Sept 2008 (masked)
CATH v3.2.0, July 2008 (masked)
DisProt v5.6, Jan 2011 (masked)
PDB SEQRES, 01 Mar 2013
 
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