Encodes a protein similar to glucose-6-phosphate dehydrogenase but%2C based on amino acid differences in the active site and lack of activity%2C does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment%2C and is not confirmed experimentally.
Protein of unknown function (DUF295)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G05540.1)%3B Has 175 Blast hits to 175 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 175%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
phloem protein 2-A10 (PP2-A10)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-A9 (TAIR:AT1G31200.1)%3B Has 113 Blast hits to 113 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 113%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
Secretory carrier membrane protein (SCAMP) family protein%3B FUNCTIONS IN: transmembrane transporter activity%3B INVOLVED IN: protein transport%3B LOCATED IN: integral to membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273)%3B BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT2G20840.1)%3B Has 670 Blast hits to 668 proteins in 104 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 376%3B Fungi - 14%3B Plants - 226%3B Viruses - 0%3B Other Eukaryotes - 54 (source: NCBI BLink).
Codes for a H+-driven%2C high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta%2C AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence.
Encodes a protein homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature. It is involved in the desaturation of VLCFAs to make monounsaturated VLCFAs.
Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.
Calcium-binding EF hand family protein%3B CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37445.1)%3B Has 71 Blast hits to 71 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 71%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins%2C plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts%2C as they regulate apoptotic-like processes ranging from pathogen attack%2C to abiotic stress%2C to plant development.
pseudogene, similar to putative glycolipid alpha-mannosyltransferase, blastp match of 41% identity and 9.6e-10 P-value to GP [Source:TAIR;Acc:AT1G06370]
Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme%2C which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during senescence%2C a process that involves jasmonic acid signalling pathway.
Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family%2C a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box%2C which encodes the SBP-domain%2C required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.
Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues%2C and was induced by Pi starvation. Localized in endoplasmic reticulum (ER)%2C and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1%3B1 transporter. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots.
Encodes a ClpP-related sequence. Though similar to ClpP proteins%2C this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).
A microRNA MIR400 is derived from the first intron of At1g32583 in the 5'UTR. A stress-induced alternative splicing event in At1g32583 resulted in greater accumulation of miR400 primary transcripts and a low level of mature miR400.
Ribosomal protein S19 family protein%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C ribosome%3B EXPRESSED IN: leaf whorl%2C flower%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S15%2C eukaryotic/archaeal (InterPro:IPR005713)%2C Ribosomal protein S19/S15 (InterPro:IPR002222)%2C Ribosomal protein S19 conserved site (InterPro:IPR020934)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09500.1)%3B Has 9984 Blast hits to 9984 proteins in 3781 species: Archae - 256%3B Bacteria - 5293%3B Metazoa - 278%3B Fungi - 251%3B Plants - 1765%3B Viruses - 0%3B Other Eukaryotes - 2141 (source: NCBI BLink).
Encodes BRANCHLESS TRICHOME (BLT) involved in trichome development. A large portion of the internal amino acid sequence of BLT is predicted to form a coiled-coil domain. BLT mutants form branchless trichomes with blunt tips.
PLATZ transcription factor family protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734)%3B BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G76590.1)%3B Has 403 Blast hits to 403 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 403%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
The PYM gene encodes a protein capable of interacting with MAGO%2C and Y14%2C whose orthologs form part of the exon junction complex in animal cells. In vitro binding assays indicate that PYM can bind to MAGO and Y14 either individually%2C or when they are together. But%2C MAGO-Y14-PYM ternary complexes are difficult to detect in vivo in Arabidopsis based on pull-down experiments. However there is some evidence for a weak association in Arabidopsis flowers. PYM appears primarily cytoplasmic%2C but it also seems to into the nucleus at times. Its nuclear localization signal has not been rigorously defined%2C but there is evidence for a nuclear export signal between amino acids 171-205 in the C-terminus.
