Interaction network for RSM_5_21.45
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Show the eQTL profiles of traits with a LOD score above the threshold at the selected locus.
Trait (count=63) Type Name LOD score Position Description
AT5G48412 gene 15.40 5:19623516 other_RNA
AT5G48570 gene 11.46 5:19690461 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010%2C Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.
AT5G47930 gene 8.19 5:19406080 Zinc-binding ribosomal protein family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: cytosolic small ribosomal subunit%2C cytosolic ribosome%2C ribosome%2C plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein%2C zinc-binding domain (InterPro:IPR011332)%2C Ribosomal protein S27e (InterPro:IPR000592)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein S27 (TAIR:AT3G61110.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G47390 gene 5.67 5:19226769 Encodes a circadian-regulated transcription factor which specifically controls cell expansion during leaf development by controlling ROS homeostasis.
AT5G50020 gene 5.47 5:20351157 DHHC-type zinc finger family protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C DHHC-type (InterPro:IPR001594)%3B BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G24630.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G49510 gene PFD3 5.29 5:20080600 prefoldin 3 (PFD3)%3B FUNCTIONS IN: unfolded protein binding%3B INVOLVED IN: protein folding%3B LOCATED IN: prefoldin complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127)%2C Prefoldin (InterPro:IPR009053)%2C Prefoldin%2C subunit 3 (InterPro:IPR016655)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G46760 gene MYC3 5.18 5:18974022 MYC3 is a JAZ-interacting transcription factor that act together with MYC2 and MYC4 to activate JA-responses.
AT5G48540 gene 4.99 5:19668964 receptor-like protein kinase-related family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to karrikin%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902)%3B BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT3G22060.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G51970 gene 4.93 5:21111445 Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.
AT5G46150 gene 4.64 5:18707546 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284%2C transmembrane eukaryotic (InterPro:IPR005045)%3B BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 1 (TAIR:AT3G12740.1)%3B Has 857 Blast hits to 857 proteins in 216 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 252%3B Fungi - 234%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 209 (source: NCBI BLink).
AT5G52180 gene 4.62 5:21200040 LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transmembrane protein 161AB%2C predicted (InterPro:IPR019395)%3B Has 82 Blast hits to 82 proteins in 35 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 47%3B Fungi - 0%3B Plants - 33%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT5G48300 gene ADG1 4.24 5:19570238 Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested.
AT5G49690 gene 4.12 5:20189655 UDP-Glycosyltransferase superfamily protein%3B FUNCTIONS IN: transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: metabolic process%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G50440 gene MEMB12 4.10 5:20537426 Member of Membrin Gene Family. Encodes a Golgi-localized SNARE protein MEMB12. MEMB12 is a target of miR393b-mediated gene silencing during Pseudomonas syringae pv. Tomato infection. Loss of function of MEMB12 leads to increased exocytosis of an antimicrobial pathogenesis-related protein%2C PR1.
AT2G39415 gene 3.80 2:16458607 F-box family protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G18150.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT5G48930 gene HCT 3.79 5:19836299 At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.
AT5G48610 gene 3.75 5:19711541 unknown protein%3B Has 43043 Blast hits to 23768 proteins in 1327 species: Archae - 108%3B Bacteria - 3952%3B Metazoa - 17076%3B Fungi - 3614%3B Plants - 1643%3B Viruses - 204%3B Other Eukaryotes - 16446 (source: NCBI BLink).
AT1G77885 gene 3.64 1:29289873 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22065.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT3G16400 gene NSP1 3.50 3:05566083 Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1%2C At2g33070/NSP2%2C At3g16390/NSP3%2C At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile%2C but not epithionitrile or thiocyanate formation.
AT5G07190 gene ATS3 3.50 5:02237474 Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.
AT5G47860 gene 3.39 5:19381519 Protein of unknown function (DUF1350)%3B LOCATED IN: chloroplast%3B EXPRESSED IN: guard cell%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT3G43540.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G14011 gene 3.38 5:04523016 unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G14011]
AT2G18120 gene SRS4 3.36 2:07876544 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis.
AT2G23580 gene MES4 3.35 2:10033043 Encodes a protein shown to have carboxylesterase activity and methyl salicylate esterase activity in vitro. This protein does not act on methyl IAA%2C methyl JA%2C MeGA4%2C or MEGA9 in vitro.
AT5G47820 gene FRA1 3.34 5:19366133 encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers.
AT5G60290 gene 3.27 5:24262864 unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G46630 gene 3.22 5:18920334 clathrin adaptor complexes medium subunit family protein%2C contains Pfam profile: PF00928 adaptor complexes medium subunit family%3B similar to micro-adaptins of clathrin coated vesicle adaptor complexes
AT4G39130 gene 3.17 4:18228118 Dehydrin family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to water%2C response to stress%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167)%3B BEST Arabidopsis thaliana protein match is: dehydrin LEA (TAIR:AT2G21490.1)%3B Has 170 Blast hits to 155 proteins in 49 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 166%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT1G78080 gene RAP2.4 3.16 1:29364072 Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.
AT1G14120 gene 3.08 1:04833396 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C 2-oxoglutarate as one donor%2C and incorporation of one atom each of oxygen into both donors%2C oxidoreductase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: hypocotyl%2C root%3B CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123)%3B BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14130.1)%3B Has 6316 Blast hits to 6255 proteins in 769 species: Archae - 0%3B Bacteria - 698%3B Metazoa - 67%3B Fungi - 416%3B Plants - 4549%3B Viruses - 0%3B Other Eukaryotes - 586 (source: NCBI BLink).
AT1G67090 gene RBCS1A 3.08 1:25048158 Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090)%2C RBCS1B (At5g38430)%2C RBCS2B (At5g38420)%2C and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity.
AT2G42840 gene PDF1 3.03 2:17826071 Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative%2C inflorescence and floral meristems and the protoderm of organ primordia.
AT3G29570 gene 3.02 3:11363806 unknown protein%3B Has 271 Blast hits to 164 proteins in 59 species: Archae - 0%3B Bacteria - 19%3B Metazoa - 88%3B Fungi - 42%3B Plants - 45%3B Viruses - 9%3B Other Eukaryotes - 68 (source: NCBI BLink).
AT3G63060 gene EDL3 -3.02 3:23300290 EDL3 is an F-box protein involved that mediated the regulation of abscisic acid signalling.
AT1G33010 gene -3.08 1:11959287 F-box and associated interaction domains-containing protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 3 (InterPro:IPR013187)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G33020.1)%3B Has 684 Blast hits to 645 proteins in 6 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 684%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G02680 gene -3.08 5:00604918 LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase%2C putative / methionyl-tRNA synthetase%2C putative / MetRS%2C putative (TAIR:AT4G13780.1)%3B Has 252 Blast hits to 252 proteins in 89 species: Archae - 0%3B Bacteria - 71%3B Metazoa - 93%3B Fungi - 0%3B Plants - 74%3B Viruses - 0%3B Other Eukaryotes - 14 (source: NCBI BLink).
AT3G15160 gene -3.09 3:05104367 unknown protein%3B Has 266 Blast hits to 264 proteins in 44 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 58%3B Fungi - 0%3B Plants - 199%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT5G45510 gene -3.13 5:18444607 Leucine-rich repeat (LRR) family protein%3B INVOLVED IN: defense response%3B LOCATED IN: cytosol%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Disease resistance protein (InterPro:IPR000767)%3B BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G19050.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G17630 gene -3.15 1:06064482 Pentatricopeptide repeat (PPR-like) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G20230.1)%3B Has 40851 Blast hits to 13793 proteins in 242 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 93%3B Fungi - 89%3B Plants - 40145%3B Viruses - 0%3B Other Eukaryotes - 517 (source: NCBI BLink).
AT5G48520 gene AUG3 -3.15 5:19661203 Encodes AUGMIN subunit3 (AUG3)%2C a homolog of animal dim gamma-tubulin 3/human augmin-like complex%2C subunit 3. Plays a critical role in microtubule organization during plant cell division.
AT1G72200 gene -3.27 1:27169759 RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%2C LP.08 eight leaves visible%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1)%3B Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 2295%3B Fungi - 806%3B Plants - 4899%3B Viruses - 51%3B Other Eukaryotes - 1288 (source: NCBI BLink).
AT3G51220 gene -3.27 3:19021705 Plant protein of unknown function (DUF827)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827%2C plant (InterPro:IPR008545)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT2G17940.1)%3B Has 141 Blast hits to 141 proteins in 34 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 8%3B Fungi - 16%3B Plants - 94%3B Viruses - 0%3B Other Eukaryotes - 19 (source: NCBI BLink).
AT1G29785 gene -3.32 1:10426779 Potential natural antisense gene%2C locus overlaps with AT1G29780
AT5G49120 gene -3.37 5:19908614 Protein of unknown function (DUF581)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G78020.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G72620 gene -3.42 1:27341021 alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: hydrolase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G17430.1)%3B Has 6611 Blast hits to 6609 proteins in 1295 species: Archae - 83%3B Bacteria - 4976%3B Metazoa - 140%3B Fungi - 18%3B Plants - 334%3B Viruses - 0%3B Other Eukaryotes - 1060 (source: NCBI BLink).
AT2G13975 gene -3.43 2:00000000 transposable element gene [Source:TAIR;Acc:AT2G13975]
AT5G45530 gene -3.44 5:18454188 Protein of unknown function (DUF594)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: C globular stage%2C F mature embryo stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45470.1)%3B Has 1338 Blast hits to 867 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1338%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G54970 gene -3.58 5:22312976 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26960.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G24410 gene PGL4 -3.63 5:08332420 Encodes a cytosolic 6-phosphogluconolactonase (PGL) thought to be involved in the oxidative pentose-phosphate pathway (OPPP).
AT2G21000 gene -3.66 2:09019506 transposable element gene [Source:TAIR;Acc:AT2G21000]
AT5G51910 gene -3.74 5:21094547 TCP family transcription factor %3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT2G45680.1)%3B Has 731 Blast hits to 731 proteins in 79 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 731%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G43623 gene -3.84 3:15530342 unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT3G43623]
AT5G49650 gene XK-2 -4.06 5:20152731 Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.
AT4G16610 gene -4.19 4:09354241 C2H2-like zinc finger protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1)%3B Has 282 Blast hits to 280 proteins in 53 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 52%3B Fungi - 13%3B Plants - 204%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT4G29460 gene PLA2-GAMMA -4.19 4:14482815 Encodes one of the four Arabidopsis phospholipase PLA2 parologs: AT2G06925 (PLA2-ALPHA)%2C AT2G19690 (PLA2-BETA)%2C AT4G29460 (PLA2-GAMMA) and AT4G29470 (PLA2-DELTA). Involved in pollen development and germination and tube growth.
AT5G50360 gene -4.53 5:20505089 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G49640 gene -5.20 5:20151163 unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G52580 gene -5.36 5:21337861 RabGAP/TBC domain-containing protein%3B FUNCTIONS IN: RAB GTPase activator activity%3B INVOLVED IN: regulation of Rab GTPase activity%3B LOCATED IN: intracellular%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195)%2C Protein of unknown function DUF3548 (InterPro:IPR021935)%3B BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G28550.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G49820 gene RUS6 -5.58 5:20246391 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function%2C DUF647 (TAIR:AT2G31190.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G53970 gene TAT7 -5.68 5:21910471 encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment
AT5G53940 gene -8.07 5:21896987 Yippee family putative zinc-binding protein%3B CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910)%3B BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT2G40110.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G50770 gene HSD6 -9.53 5:20646680 Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1)%2C At3g47350(HSD2)%2C At3g47360(HSD3)%2C At5g50590 and At5g50690(HSD4)%2C At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87%2C At5g50690 is HSD7%2C At4g10020 is HSD5.
AT5G52420 gene -20.36 5:21281569 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endoplasmic reticulum%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).