Interaction network for MSAT110
Layout:
Zoom

Total candidates:
Total candidates with interaction:
legend
Please select a peak in the plot
?
Show the eQTL profiles of traits with a LOD score above the threshold at the selected locus.
Trait (count=80) Type Name LOD score Position Description
AT1G20620 gene CAT3 42.66 1:07142972 Catalase%2C catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.
AT1G19570 gene DHAR1 11.70 1:06773302 Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.
AT1G21690 gene EMB1968 8.53 1:07615505 embryo defective 1968 (EMB1968)%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: DNA replication factor C complex%2C nucleolus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C Replication factor C (InterPro:IPR013748)%2C DNA polymerase III%2C clamp loader complex%2C gamma/delta/delta subunit%2C C-terminal (InterPro:IPR008921)%3B BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1)%3B Has 18128 Blast hits to 18077 proteins in 2897 species: Archae - 631%3B Bacteria - 10254%3B Metazoa - 847%3B Fungi - 935%3B Plants - 386%3B Viruses - 88%3B Other Eukaryotes - 4987 (source: NCBI BLink).
AT5G45030 gene 6.03 5:18172410 Trypsin family protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase%2C trypsin-like (InterPro:IPR009003)%3B BEST Arabidopsis thaliana protein match is: Trypsin family protein (TAIR:AT2G35155.1)%3B Has 134 Blast hits to 134 proteins in 31 species: Archae - 0%3B Bacteria - 55%3B Metazoa - 0%3B Fungi - 0%3B Plants - 79%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G59060 gene PIL6 5.89 3:21827905 Encodes a novel Myc-related bHLH transcription factor%2C which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B.
AT4G02465 gene 5.77 4:01080962 unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G72950 gene 5.70 1:27444415 Disease resistance protein (TIR-NBS class)%3B FUNCTIONS IN: transmembrane receptor activity%2C ATP binding%3B INVOLVED IN: signal transduction%2C apoptosis%2C defense response%2C innate immune response%3B LOCATED IN: intrinsic to membrane%3B EXPRESSED IN: stem%2C root%3B CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182)%2C Disease resistance protein (InterPro:IPR000767)%2C Toll-Interleukin receptor (InterPro:IPR000157)%3B BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72940.1)%3B Has 5085 Blast hits to 4944 proteins in 192 species: Archae - 0%3B Bacteria - 94%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4991%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G21890 gene 5.46 4:11610808 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 7 growth stages%3B Has 14 Blast hits to 14 proteins in 5 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 14%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT2G11030 gene 5.37 2:04370829 transposable element gene [Source:TAIR;Acc:AT2G11030]
AT5G28230 gene 5.01 5:10195174 pseudogene, similar to glucose-6-phosphate/phosphate-translocator precursor, contains similarity to glucose-6-phosphate/phosphate-translocator precursors; blastp match of 78% identity and 1.6e-75 P-value to GP [Source:TAIR;Acc:AT5G28230]
AT1G22990 gene HIPP22 4.93 1:08139114 Heavy metal transport/detoxification superfamily protein %3B FUNCTIONS IN: metal ion binding%3B INVOLVED IN: metal ion transport%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C C globular stage%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%3B BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1)%3B Has 1142 Blast hits to 1079 proteins in 46 species: Archae - 2%3B Bacteria - 2%3B Metazoa - 2%3B Fungi - 13%3B Plants - 1123%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G27870 gene 4.85 5:09878689 Plant invertase/pectin methylesterase inhibitor superfamily%3B FUNCTIONS IN: enzyme inhibitor activity%2C pectinesterase activity%3B INVOLVED IN: cell wall modification%3B LOCATED IN: cell wall%2C plant-type cell wall%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectinesterase%2C catalytic (InterPro:IPR000070)%2C Pectinesterase inhibitor (InterPro:IPR006501)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G35300 gene 4.75 5:13518317 unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G17744 gene 4.63 1:06100961 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: stem%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G16490 gene IQD26 4.61 3:05603848 IQ-domain 26 (IQD26)%3B CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048)%3B BEST Arabidopsis thaliana protein match is: IQ-domain 27 (TAIR:AT1G51960.1)%3B Has 778 Blast hits to 763 proteins in 39 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 10%3B Plants - 755%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink).
AT5G48100 gene TT10 4.47 5:19489327 Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa%2C where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa%2C characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds%2C which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.
AT1G20696 gene HMGB3 4.45 1:07179273 Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif%2C the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.
AT3G06280 gene 4.41 3:01898155 F-box associated ubiquitination effector family protein%3B CONTAINS InterPro DOMAIN/s: F-box associated domain%2C type 3 (InterPro:IPR013187)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G47730.1)%3B Has 474 Blast hits to 464 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 474%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G24260 gene SEP3 4.38 1:08593536 Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.
AT1G42727 gene 4.32 1:16085799 transposable element gene [Source:TAIR;Acc:AT1G42727]
AT3G12730 gene 4.24 3:04047012 Homeodomain-like superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G79430.2)%3B Has 1659 Blast hits to 1654 proteins in 62 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 1640%3B Viruses - 0%3B Other Eukaryotes - 18 (source: NCBI BLink).
AT5G33806 gene 4.22 5:12784839 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06688.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G56747 gene 4.20 5:22956286 transposable element gene [Source:TAIR;Acc:AT5G56747]
AT1G19360 gene RRA3 4.12 1:06690399 Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells.
AT2G25305 gene 4.12 2:10774501 Encodes a defensin-like (DEFL) family protein.
AT2G01550 gene 4.10 2:00243918 transposable element gene [Source:TAIR;Acc:AT2G01550]
AT1G22250 gene 4.08 1:07858864 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1)%3B Has 64 Blast hits to 64 proteins in 10 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 64%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G78180 gene 4.03 1:29416837 Mitochondrial substrate carrier family protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: transport%2C mitochondrial transport%2C transmembrane transport%3B LOCATED IN: mitochondrial inner membrane%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067)%2C Mitochondrial substrate carrier (InterPro:IPR001993)%2C Mitochondrial substrate/solute carrier (InterPro:IPR018108)%3B BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G64970.1)%3B Has 23010 Blast hits to 13205 proteins in 452 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 9903%3B Fungi - 6601%3B Plants - 4239%3B Viruses - 0%3B Other Eukaryotes - 2267 (source: NCBI BLink).
AT5G24200 gene 4.02 5:08202919 alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: triglyceride lipase activity%3B INVOLVED IN: lipid metabolic process%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Lipase%2C class 3 (InterPro:IPR002921)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G24210.1)%3B Has 219 Blast hits to 218 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 0%3B Plants - 214%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT2G16245 gene 4.02 2:07039677 Potential natural antisense gene%2C locus overlaps with AT2G16250
AT1G78450 gene 4.01 1:29516989 SOUL heme-binding family protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917)%3B BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G17100.1)%3B Has 640 Blast hits to 629 proteins in 68 species: Archae - 2%3B Bacteria - 20%3B Metazoa - 147%3B Fungi - 0%3B Plants - 124%3B Viruses - 0%3B Other Eukaryotes - 347 (source: NCBI BLink).
AT5G28263 gene 4.00 5:10241337 transposable element gene [Source:TAIR;Acc:AT5G28263]
AT5G57130 gene 3.99 5:23144947 Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101%2C a ClpB chaperonin required for thermotolerance.
AT1G20410 gene 3.97 1:07078804 Pseudouridine synthase family protein%3B FUNCTIONS IN: pseudouridine synthase activity%2C RNA binding%3B INVOLVED IN: pseudouridine synthesis%2C RNA modification%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pseudouridine synthase%2C catalytic domain (InterPro:IPR020103)%3B Has 545 Blast hits to 513 proteins in 206 species: Archae - 168%3B Bacteria - 1%3B Metazoa - 125%3B Fungi - 4%3B Plants - 38%3B Viruses - 0%3B Other Eukaryotes - 209 (source: NCBI BLink).
AT1G19990 gene 3.96 1:06935218 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1)%3B Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6%3B Bacteria - 629%3B Metazoa - 4714%3B Fungi - 936%3B Plants - 545%3B Viruses - 34%3B Other Eukaryotes - 4392 (source: NCBI BLink).
AT5G17450 gene HIPP21 3.96 5:05755222 Heavy metal transport/detoxification superfamily protein %3B FUNCTIONS IN: metal ion binding%3B INVOLVED IN: metal ion transport%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%3B BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G19010 gene 3.95 1:06565494 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74860.1)%3B Has 337 Blast hits to 320 proteins in 97 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 153%3B Fungi - 26%3B Plants - 76%3B Viruses - 0%3B Other Eukaryotes - 68 (source: NCBI BLink).
AT5G14020 gene 3.94 5:04523421 Endosomal targeting BRO1-like domain-containing protein%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: vacuole%3B EXPRESSED IN: root%3B CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328)%3B BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3)%3B Has 94 Blast hits to 94 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 93%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).
AT1G75840 gene ARAC5 3.94 1:28475649 Belongs to the plant-specific ROP group of Rho GTPases%3B localized to the plasma membrane of tips of root hairs%3B involved in polar growth control.
AT1G53440 gene 3.94 1:19945869 Leucine-rich repeat transmembrane protein kinase%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Leucine-rich repeat (InterPro:IPR001611)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Malectin/receptor-like protein kinase (InterPro:IPR021720)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1)%3B Has 190921 Blast hits to 136069 proteins in 4848 species: Archae - 114%3B Bacteria - 18757%3B Metazoa - 52699%3B Fungi - 11122%3B Plants - 85531%3B Viruses - 458%3B Other Eukaryotes - 22240 (source: NCBI BLink).
AT3G43635 gene 3.93 3:15541165 transposable element gene [Source:TAIR;Acc:AT3G43635]
AT1G19480 gene 3.93 1:06744353 DNA glycosylase superfamily protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: DNA repair%2C base-excision repair%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257)%2C HhH-GPD domain (InterPro:IPR003265)%3B BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1)%3B Has 4603 Blast hits to 4603 proteins in 1096 species: Archae - 62%3B Bacteria - 2357%3B Metazoa - 1%3B Fungi - 142%3B Plants - 80%3B Viruses - 0%3B Other Eukaryotes - 1961 (source: NCBI BLink).
AT5G21920 gene YLMG2 3.92 5:07241201 YLMG2%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%2C membrane%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425)%3B BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT4G27990.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G13710 gene 3.87 4:07962428 Pectin lyase-like superfamily protein%3B FUNCTIONS IN: lyase activity%2C pectate lyase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C AmbAllergen (InterPro:IPR018082)%2C Pectate lyase/Amb allergen (InterPro:IPR002022)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G24230.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G44080 gene 3.86 3:15835632 F-box family protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C FBD-like (InterPro:IPR006566)%3B BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G44090.1)%3B Has 1303 Blast hits to 1188 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 1301%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G12200 gene Nek7 -3.87 3:03886957 Encodes AtNek7%2C a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.
AT3G42913 gene -3.87 3:14979792 transposable element gene [Source:TAIR;Acc:AT3G42913]
AT4G35230 gene BSK1 -3.89 4:16755092 Encodes BR-signaling kinase 1 (BSK1)%2C one of the three homologous BR-signaling kinases (BSK1%2C AT4G35230%3B BSK2%2C AT5G46570%3B BSK3%2C AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
AT5G19990 gene RPT6A -3.91 5:06751798 26S proteasome AAA-ATPase subunit
AT5G54010 gene -3.92 5:21919593 Encodes a flavonoid 3-O-glucoside:2%26#8243%3B-O-glucosyltransferase that determines pollen-specific flavonol structure.
AT2G46520 gene -3.96 2:19096413 cellular apoptosis susceptibility protein%2C putative / importin-alpha re-exporter%2C putative%3B FUNCTIONS IN: protein transporter activity%2C importin-alpha export receptor activity%2C binding%3B INVOLVED IN: intracellular protein transport%2C cell proliferation%2C protein import into nucleus%2C docking%3B LOCATED IN: nucleus%2C nuclear pore%2C membrane%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Importin-beta%2C N-terminal (InterPro:IPR001494)%2C CAS/CSE%2C C-terminal (InterPro:IPR005043)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%2C Exportin/Importin%2C Cse1-like (InterPro:IPR013713)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2)%3B Has 1154 Blast hits to 1141 proteins in 210 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 461%3B Fungi - 384%3B Plants - 163%3B Viruses - 0%3B Other Eukaryotes - 146 (source: NCBI BLink).
AT3G55980 gene SZF1 -3.96 3:20776220 salt-inducible zinc finger 1 (SZF1)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G40140.2)%3B Has 1623 Blast hits to 1414 proteins in 181 species: Archae - 2%3B Bacteria - 49%3B Metazoa - 777%3B Fungi - 32%3B Plants - 465%3B Viruses - 2%3B Other Eukaryotes - 296 (source: NCBI BLink).
AT2G31957 gene LCR75 -4.13 2:13587675 Encodes a member of a family of small%2Csecreted%2C cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.
AT2G41620 gene -4.13 2:17347304 Nucleoporin interacting component (Nup93/Nic96-like) family protein%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: transport%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleoporin interacting component Nup93/Nic96 (InterPro:IPR007231)%3B BEST Arabidopsis thaliana protein match is: Nucleoporin interacting component (Nup93/Nic96-like) family protein (TAIR:AT3G57350.1)%3B Has 357 Blast hits to 350 proteins in 149 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 168%3B Fungi - 130%3B Plants - 48%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT5G47580 gene ASG7 -4.26 5:19294813 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G09970 gene LRR XI-23 -4.30 1:03252098 RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.
AT2G43450 gene -4.36 2:18043234 unknown protein%3B Has 1 Blast hits to 1 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G58990 gene -4.38 5:23814763 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G47750 gene D6PKL2 -4.42 5:19339703 D6 protein kinase like 2 (D6PKL2)%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: nucleolus%2C nucleus%2C cytoplasm%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G20670 gene -4.50 1:07164082 DNA-binding bromodomain-containing protein%3B CONTAINS InterPro DOMAIN/s: Bromodomain%2C conserved site (InterPro:IPR018359)%2C Bromodomain (InterPro:IPR001487)%3B BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2)%3B Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0%3B Bacteria - 121%3B Metazoa - 4363%3B Fungi - 1457%3B Plants - 677%3B Viruses - 7%3B Other Eukaryotes - 4471 (source: NCBI BLink).
AT3G58470 gene -4.51 3:21626671 nucleic acid binding%3Bmethyltransferases%3B FUNCTIONS IN: methyltransferase activity%2C nucleic acid binding%3B INVOLVED IN: methylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA methylase%2C N-6 adenine-specific%2C eukaryotic (InterPro:IPR019369)%2C DNA methylase%2C N-6 adenine-specific%2C conserved site (InterPro:IPR002052)%3B Has 287 Blast hits to 287 proteins in 136 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 124%3B Fungi - 79%3B Plants - 48%3B Viruses - 0%3B Other Eukaryotes - 36 (source: NCBI BLink).
AT5G22600 gene -4.52 5:07509843 FBD / Leucine Rich Repeat domains containing protein%3B CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596)%2C FBD-like (InterPro:IPR006566)%2C Leucine-rich repeat 2 (InterPro:IPR013101)%3B BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G22610.1)%3B Has 687 Blast hits to 669 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 10%3B Plants - 677%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G75470 gene PUP15 -4.52 1:28330054 Member of a family of proteins related to PUP1%2C a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins%2C across the plasma membrane.
AT1G19120 gene LSM1A -4.55 1:06608115 Small nuclear ribonucleoprotein family protein%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G14080.2)%3B Has 1149 Blast hits to 1149 proteins in 232 species: Archae - 65%3B Bacteria - 0%3B Metazoa - 426%3B Fungi - 329%3B Plants - 203%3B Viruses - 0%3B Other Eukaryotes - 126 (source: NCBI BLink).
AT1G20980 gene SPL14 -4.58 1:07324471 Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator%2C including a nuclear localization signal sequence%2C a plant-specific DNA binding domain (the SBP box)%2C and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1%2C but also in the development of normal plant architecture.
AT3G05740 gene RECQI1 -4.58 3:01698079 RECQ helicase l1 (RECQI1)%3B FUNCTIONS IN: helicase activity%2C nucleic acid binding%2C ATP-dependent helicase activity%2C ATP binding%3B INVOLVED IN: DNA recombination%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C DNA helicase%2C ATP-dependent%2C RecQ type (InterPro:IPR004589)%2C DNA helicase%2C ATP-dependent%2C RecQ type%2C N-terminal (InterPro:IPR018329)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1)%3B Has 22913 Blast hits to 22836 proteins in 2673 species: Archae - 358%3B Bacteria - 13443%3B Metazoa - 2936%3B Fungi - 2132%3B Plants - 1261%3B Viruses - 9%3B Other Eukaryotes - 2774 (source: NCBI BLink).
AT2G29820 gene -4.77 2:12728362 Galactose oxidase/kelch repeat superfamily protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C Galactose oxidase/kelch%2C beta-propeller (InterPro:IPR011043)%2C Kelch repeat type 1 (InterPro:IPR006652)%2C Kelch related (InterPro:IPR013089)%2C Kelch-type beta propeller (InterPro:IPR015915)%3B BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G29830.1)%3B Has 2885 Blast hits to 2442 proteins in 138 species: Archae - 8%3B Bacteria - 155%3B Metazoa - 1559%3B Fungi - 15%3B Plants - 1052%3B Viruses - 18%3B Other Eukaryotes - 78 (source: NCBI BLink).
AT1G19980 gene -4.88 1:06933015 cytomatrix protein-related%3B Has 8598 Blast hits to 6353 proteins in 629 species: Archae - 108%3B Bacteria - 984%3B Metazoa - 3794%3B Fungi - 795%3B Plants - 240%3B Viruses - 29%3B Other Eukaryotes - 2648 (source: NCBI BLink).
AT5G46400 gene PRP39-2 -4.89 5:18819933 PRP39-2%3B INVOLVED IN: RNA processing%3B LOCATED IN: intracellular%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA-processing protein%2C HAT helix (InterPro:IPR003107)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04080.1)%3B Has 41473 Blast hits to 19964 proteins in 957 species: Archae - 8%3B Bacteria - 2112%3B Metazoa - 13232%3B Fungi - 4812%3B Plants - 3812%3B Viruses - 173%3B Other Eukaryotes - 17324 (source: NCBI BLink).
AT1G19600 gene -5.32 1:06778887 pfkB-like carbohydrate kinase family protein%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: D-ribose catabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611)%3B BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1)%3B Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257%3B Bacteria - 7533%3B Metazoa - 331%3B Fungi - 90%3B Plants - 444%3B Viruses - 0%3B Other Eukaryotes - 3091 (source: NCBI BLink).
AT1G18160 gene -5.33 1:06248619 Protein kinase superfamily protein%3B FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity%2C kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11850.1)%3B Has 123759 Blast hits to 122075 proteins in 4739 species: Archae - 100%3B Bacteria - 12949%3B Metazoa - 47184%3B Fungi - 11113%3B Plants - 33371%3B Viruses - 486%3B Other Eukaryotes - 18556 (source: NCBI BLink).
AT4G37235 gene -5.35 4:17517743 Uncharacterised protein family (UPF0497)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G50810.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT1G13340 gene -5.51 1:04569448 Regulator of Vps4 activity in the MVB pathway protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292%2C eukaryotic (InterPro:IPR005061)%3B BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2)%3B Has 628 Blast hits to 628 proteins in 152 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 164%3B Fungi - 130%3B Plants - 284%3B Viruses - 0%3B Other Eukaryotes - 50 (source: NCBI BLink).
AT1G21260 gene -5.85 1:07442218 transposable element gene [Source:TAIR;Acc:AT1G21260]
AT4G14860 gene OFP11 -5.96 4:08516372 ovate family protein 11 (OFP11)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458)%3B BEST Arabidopsis thaliana protein match is: ovate family protein 16 (TAIR:AT2G32100.1)%3B Has 297 Blast hits to 297 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 297%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G22090 gene emb2204 -6.26 1:07795708 embryo defective 2204 (emb2204)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626%2C Arabidopsis thaliana (InterPro:IPR006462)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT1G02770.1)%3B Has 202 Blast hits to 201 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 202%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G22340 gene UGT85A7 -6.40 1:07890259 UDP-glucosyl transferase 85A7 (UGT85A7)%3B FUNCTIONS IN: UDP-glycosyltransferase activity%2C transferase activity%2C transferring glycosyl groups%2C glucuronosyltransferase activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 8 plant structures%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1)%3B Has 7763 Blast hits to 7662 proteins in 424 species: Archae - 0%3B Bacteria - 289%3B Metazoa - 2112%3B Fungi - 32%3B Plants - 5212%3B Viruses - 58%3B Other Eukaryotes - 60 (source: NCBI BLink).
AT1G22380 gene UGT85A3 -6.50 1:07900355 Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154%2C which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.
AT1G20225 gene -6.88 1:07007756 Thioredoxin superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: vacuole%3B CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336)%3B BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G76020.1)%3B Has 208 Blast hits to 204 proteins in 76 species: Archae - 0%3B Bacteria - 103%3B Metazoa - 14%3B Fungi - 6%3B Plants - 51%3B Viruses - 0%3B Other Eukaryotes - 34 (source: NCBI BLink).
AT1G21280 gene -11.33 1:07447490 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)%3B Has 707 Blast hits to 705 proteins in 25 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 703%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).