Interaction network for JV7576
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Show the eQTL profiles of traits with a LOD score above the threshold at the selected locus.
Trait (count=49) Type Name LOD score Position Description
AT5G60340 gene AAK6 15.61 5:24274876 Encodes a nuclear adenylate kinase that interacts with a putative homolog of Rps14%2C AtRPS14-1 and affects the elongation of cells in the stem.
AT5G61820 gene 11.63 5:24834300 FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G63080 gene 10.73 5:25299933 Encodes a HR demethylase that acts as a positive regulator of seed germination in the PHYB-PIL5-SOM pathway.
AT5G58770 gene cPT4 10.64 5:23734273 Undecaprenyl pyrophosphate synthetase family protein%3B FUNCTIONS IN: dehydrodolichyl diphosphate synthase activity%3B INVOLVED IN: dolichol biosynthetic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like%2C conserved site (InterPro:IPR018520)%2C Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441)%3B BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G58782.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G60370 gene 10.58 5:24282666 FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like%2C mitochondrial (InterPro:IPR019190)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G59690 gene 9.74 5:24051474 Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: thylakoid%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Histone H4%2C conserved site (InterPro:IPR019809)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%2C Histone H4 (InterPro:IPR001951)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59970.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G63030 gene GRXC1 9.20 5:25286177 Thioredoxin superfamily protein%3B FUNCTIONS IN: electron carrier activity%2C arsenate reductase (glutaredoxin) activity%2C protein disulfide oxidoreductase activity%3B INVOLVED IN: N-terminal protein myristoylation%2C cell redox homeostasis%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335)%2C Glutaredoxin (InterPro:IPR002109)%2C Glutaredoxin subgroup (InterPro:IPR014025)%2C Glutaredoxin%2C eukaryotic/virial (InterPro:IPR011899)%2C Thioredoxin-like fold (InterPro:IPR012336)%3B BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G40370.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G59730 gene EXO70H7 9.01 5:24063875 A member of EXO70 gene family%2C putative exocyst subunits%2C conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes%2C which can be classified into eight clusters on the phylogenetic tree.
AT5G61210 gene SNAP33 7.70 5:24623248 membrane localized t-SNARE SNAP25 homologue%2C probably involved in cytokinesis and cell plate formation
AT5G59440 gene ZEU1 7.64 5:23971063 Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.
AT5G58100 gene 7.56 5:23507337 unknown protein%3B INVOLVED IN: pollen exine formation%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 8 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT5G64310 gene AGP1 7.49 5:25721733 Encodes arabinogalactan-protein (AGP1).
AT5G56980 gene 6.44 5:23056080 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 12 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G54860 gene 6.11 5:22284425 Major facilitator superfamily protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: transport%3B LOCATED IN: endomembrane system%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%2C Biopterin transport-related protein BT1 (InterPro:IPR004324)%3B BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G64890.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G57655 gene 6.07 5:23346675 xylose isomerase family protein%3B FUNCTIONS IN: xylose isomerase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endoplasmic reticulum%2C plasma membrane%2C vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Xylose isomerase-like%2C TIM barrel domain (InterPro:IPR013022)%2C Xylose isomerase (InterPro:IPR001998)%2C Xylose isomerase%2C TIM barrel domain (InterPro:IPR012307)%3B Has 2369 Blast hits to 2369 proteins in 858 species: Archae - 2%3B Bacteria - 1867%3B Metazoa - 8%3B Fungi - 2%3B Plants - 76%3B Viruses - 0%3B Other Eukaryotes - 414 (source: NCBI BLink).
AT5G58490 gene 5.71 5:23643009 NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: coenzyme binding%2C binding%2C cinnamoyl-CoA reductase activity%2C catalytic activity%3B INVOLVED IN: lignin biosynthetic process%2C cellular metabolic process%2C metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509)%2C NAD(P)-binding domain (InterPro:IPR016040)%3B BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G02400.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G07868 gene 5.66 4:04691762 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G62610 gene 5.09 5:25132841 basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1)%3B Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 18%3B Fungi - 49%3B Plants - 2274%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G60610 gene 4.50 5:24363591 F-box/RNI-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C FBD (InterPro:IPR013596)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C Leucine-rich repeat 2 (InterPro:IPR013101)%3B BEST Arabidopsis thaliana protein match is: FBD%2C F-box and Leucine Rich Repeat domains containing protein (TAIR:AT2G26860.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G52230 gene MBD13 4.50 5:21207784 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.
AT5G63020 gene 4.42 5:25283063 Disease resistance protein (CC-NBS-LRR class) family%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: N-terminal protein myristoylation%2C defense response%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766)%2C NB-ARC (InterPro:IPR002182)%2C Disease resistance protein (InterPro:IPR000767)%3B BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2)%3B Has 14258 Blast hits to 13662 proteins in 567 species: Archae - 8%3B Bacteria - 542%3B Metazoa - 1192%3B Fungi - 130%3B Plants - 12234%3B Viruses - 0%3B Other Eukaryotes - 152 (source: NCBI BLink).
AT5G58590 gene RANBP1 4.41 5:23680063 Encodes a Ran-binding protein 1 homolog (RanBP1).
AT5G59950 gene 4.39 5:24139939 RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.1)%3B Has 10964 Blast hits to 9767 proteins in 726 species: Archae - 14%3B Bacteria - 1131%3B Metazoa - 5027%3B Fungi - 1686%3B Plants - 1961%3B Viruses - 34%3B Other Eukaryotes - 1111 (source: NCBI BLink).
AT5G57230 gene 4.24 5:23189938 Thioredoxin superfamily protein%3B CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336)%3B Has 37 Blast hits to 37 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 35%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT5G57685 gene GDU3 4.19 5:23365805 Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1)%2C At4g25760 (GDU2)%2C At5g57685 (GDU3)%2C At2g24762 (GDU4)%2C At5g24920 (GDU5)%2C At3g30725 (GDU6) and At5g38770 (GDU7).
AT5G65920 gene 4.18 5:26363709 ARM repeat superfamily protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: protein ubiquitination%3B LOCATED IN: ubiquitin ligase complex%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G49810.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G58720 gene 4.18 5:23719695 smr (Small MutS Related) domain-containing protein%3B CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625)%2C Domain of unknown function DUF1771 (InterPro:IPR013899)%3B BEST Arabidopsis thaliana protein match is: silencing defective 5 (TAIR:AT3G15390.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G62150 gene 4.15 5:24958125 peptidoglycan-binding LysM domain-containing protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: cell wall macromolecule catabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 6 growth stages%3B BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1)%3B Has 63 Blast hits to 63 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 63%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G33500 gene 4.02 4:16112624 Protein phosphatase 2C family protein%3B FUNCTIONS IN: protein serine/threonine phosphatase activity%2C phosphoprotein phosphatase activity%2C catalytic activity%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932)%2C Sporulation stage II%2C protein E C-terminal (InterPro:IPR010822)%3B BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G60270 gene 4.02 5:24257723 Concanavalin A-like lectin protein kinase family protein%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Legume lectin%2C beta chain (InterPro:IPR001220)%2C Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Concanavalin A-like lectin/glucanase%2C subgroup (InterPro:IPR013320)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Concanavalin A-like lectin/glucanase (InterPro:IPR008985)%3B BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G45440.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G13510 gene AMT1%3B1 4.00 4:07858183 Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.
AT5G58270 gene ABCB25 4.00 5:23561890 Encodes a mitochondrial half-molecule ABC transporter%2C a member of ATM subfamily. Mutants are dwarfed%2C chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes%2C namely ATM1%2C ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.
AT5G59613 gene -3.86 5:24015394 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G59560 gene SRR1 -3.88 5:24000476 Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling.
AT2G36320 gene -3.94 2:15228714 A20/AN1-like zinc finger family protein%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C AN1-type (InterPro:IPR000058)%2C Zinc finger%2C A20-type (InterPro:IPR002653)%3B BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT3G52800.1)%3B Has 1065 Blast hits to 1046 proteins in 150 species: Archae - 2%3B Bacteria - 0%3B Metazoa - 450%3B Fungi - 9%3B Plants - 480%3B Viruses - 6%3B Other Eukaryotes - 118 (source: NCBI BLink).
AT1G09950 gene RAS1 -4.08 1:03240531 RESPONSE TO ABA AND SALT 1 (RAS1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: leaf apex%2C root%2C flower%2C leaf%3B EXPRESSED DURING: petal differentiation and expansion stage%3B BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT1G58330.1)%3B Has 520 Blast hits to 520 proteins in 34 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 520%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G59210 gene -4.89 5:23890546 myosin heavy chain-related%3B Has 64840 Blast hits to 37428 proteins in 2371 species: Archae - 766%3B Bacteria - 8706%3B Metazoa - 32710%3B Fungi - 5334%3B Plants - 2996%3B Viruses - 150%3B Other Eukaryotes - 14178 (source: NCBI BLink).
AT5G25300 gene -5.07 5:08780258 CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%3B BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT5G25290.1)%3B Has 285 Blast hits to 224 proteins in 5 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 282%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).
AT5G58090 gene -5.16 5:23505221 O-Glycosyl hydrolases family 17 protein%3B FUNCTIONS IN: cation binding%2C hydrolase activity%2C hydrolyzing O-glycosyl compounds%2C catalytic activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: anchored to plasma membrane%2C plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C family 17 (InterPro:IPR000490)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%3B BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G60548 gene CPuORF62 -5.85 5:24339229 conserved peptide upstream open reading frame 62 [Source:TAIR;Acc:AT5G60548]
AT5G57390 gene AIL5 -7.15 5:23252989 Encodes a member of the AP2 family of transcriptional regulators. May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants. Overexpression results in the formation of somatic embryos on cotyledons. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions.
AT5G57570 gene -7.15 5:23313401 GCK domain-containing protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: GCK (InterPro:IPR012891)%3B BEST Arabidopsis thaliana protein match is: GCK domain-containing protein (TAIR:AT5G57640.1)%3B Has 84 Blast hits to 82 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 80%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).
AT5G58980 gene -9.45 5:23811449 Neutral/alkaline non-lysosomal ceramidase%3B FUNCTIONS IN: ceramidase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823)%3B BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT1G07380.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G57567 gene -11.38 5:23312045 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B Has 2 Blast hits to 2 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 2%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G57240 gene ORP4C -11.47 5:23192872 OSBP(oxysterol binding protein)-related protein 4C (ORP4C)%3B FUNCTIONS IN: oxysterol binding%3B INVOLVED IN: steroid metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein%2C conserved site (InterPro:IPR018494)%2C Oxysterol-binding protein (InterPro:IPR000648)%3B BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.1)%3B Has 2168 Blast hits to 2165 proteins in 214 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1089%3B Fungi - 634%3B Plants - 225%3B Viruses - 0%3B Other Eukaryotes - 220 (source: NCBI BLink).
AT5G59590 gene UGT76E2 -13.36 5:24008865 UDP-glucosyl transferase 76E2 (UGT76E2)%3B FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity%2C UDP-glycosyltransferase activity%2C quercetin 7-O-glucosyltransferase activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E1 (TAIR:AT5G59580.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G60640 gene PDIL1-4 -14.13 5:24370827 Encodes a protein disulfide isomerase-like (PDIL) protein%2C a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members%2C transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol%2C beta-mercaptoethanol%2C and tunicamycin). However%2C the level of transcripts for this gene is slightly elevated in atbzip60 mutants.
AT5G59140 gene -14.61 5:23874311 BTB/POZ domain-containing protein%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: BTB/POZ fold (InterPro:IPR011333)%2C SKP1 component%2C POZ (InterPro:IPR016073)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G58130 gene ROS3 -17.65 5:23521049 Encodes ROS3 (repressor of silencing 3)%2C a RNA-binding protein required for DNA demethylation.