AT3G16990
gene
24.12
3:05795123
Haem oxygenase-like%2C multi-helical%3B CONTAINS InterPro DOMAIN/s: Haem oxygenase-like%2C multi-helical (InterPro:IPR016084)%2C TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305)%3B Has 259 Blast hits to 259 proteins in 88 species: Archae - 23%3B Bacteria - 94%3B Metazoa - 0%3B Fungi - 34%3B Plants - 38%3B Viruses - 0%3B Other Eukaryotes - 70 (source: NCBI BLink).
AT4G23050
gene
19.83
4:12079859
PAS domain-containing protein tyrosine kinase family protein%3B FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity%2C protein kinase activity%2C signal transducer activity%3B INVOLVED IN: signal transduction%2C protein amino acid phosphorylation%2C regulation of transcription%2C DNA-dependent%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610)%2C Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C PAS fold (InterPro:IPR013767)%2C PAS (InterPro:IPR000014)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT3G06640.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G16770
gene
EBP
19.50
3:05705541
Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1%2C but not under EIN3.
AT3G56810
gene
16.35
3:21036711
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 14 Blast hits to 14 proteins in 7 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 14%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G16950
gene
LPD1
14.10
3:05786298
encodes a plastid lipoamide dehydrogenase%2C subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.
AT3G17510
gene
CIPK1
13.59
3:05988924
Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.
AT3G16520
gene
UGT88A1
13.57
3:05618408
UDP-glucosyl transferase 88A1 (UGT88A1)%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1)%3B Has 7498 Blast hits to 7448 proteins in 453 species: Archae - 0%3B Bacteria - 251%3B Metazoa - 2053%3B Fungi - 26%3B Plants - 4988%3B Viruses - 120%3B Other Eukaryotes - 60 (source: NCBI BLink).
AT1G67650
gene
13.46
1:25359612
SRP72 RNA-binding domain%3B FUNCTIONS IN: 7S RNA binding%3B INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane%3B LOCATED IN: signal recognition particle%3B CONTAINS InterPro DOMAIN/s: Signal recognition particle%2C SRP72 subunit%2C RNA-binding (InterPro:IPR013699)%3B BEST Arabidopsis thaliana protein match is: SRP72 RNA-binding domain (TAIR:AT1G67680.1)%3B Has 433 Blast hits to 428 proteins in 197 species: Archae - 4%3B Bacteria - 29%3B Metazoa - 154%3B Fungi - 136%3B Plants - 31%3B Viruses - 0%3B Other Eukaryotes - 79 (source: NCBI BLink).
AT2G16590
gene
None
12.61
None:
None
AT2G22040
gene
LST8-2
12.53
2:09374438
Encodes a homolog of LST8 (Lethal with Sec Thirteen 8/G protein b subunit-like (LST8/GbL).
AT3G18950
gene
11.96
3:06536534
Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1)%3B Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20%3B Bacteria - 4381%3B Metazoa - 11289%3B Fungi - 6965%3B Plants - 3765%3B Viruses - 0%3B Other Eukaryotes - 3687 (source: NCBI BLink).
AT1G12120
gene
11.24
1:04114674
Plant protein of unknown function (DUF863)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863%2C plant (InterPro:IPR008581)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G62530.2)%3B Has 160 Blast hits to 145 proteins in 37 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 12%3B Fungi - 14%3B Plants - 101%3B Viruses - 0%3B Other Eukaryotes - 31 (source: NCBI BLink).
AT3G18165
gene
MOS4
11.12
3:06223125
Encodes MOS4 (Modifier of snc1%2C 4)%2C a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.
AT3G19350
gene
MPC
10.64
3:06705474
Encodes a the C-terminal domain of poly(A) binding proteins. MPC is imprinted such that only the maternal allele is expressed in the endosperm. MPC is silenced by the action of MET1 and its expression is promoted by DEM.
AT3G13870
gene
RHD3
10.34
3:04565370
required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.
AT1G05840
gene
10.23
1:01762734
Eukaryotic aspartyl protease family protein%3B FUNCTIONS IN: aspartic-type endopeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: anchored to membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase aspartic%2C catalytic (InterPro:IPR009007)%2C Peptidase aspartic (InterPro:IPR021109)%2C Peptidase A1 (InterPro:IPR001461)%3B BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1)%3B Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 466%3B Fungi - 565%3B Plants - 1776%3B Viruses - 0%3B Other Eukaryotes - 209 (source: NCBI BLink).
AT3G16780
gene
9.80
3:05708826
Ribosomal protein L19e family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196)%2C Ribosomal protein L19/L19e%2C domain 3 (InterPro:IPR015974)%2C Ribosomal protein L19/L19e%2C domain 1 (InterPro:IPR015972)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1)%3B Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291%3B Bacteria - 0%3B Metazoa - 317%3B Fungi - 171%3B Plants - 158%3B Viruses - 0%3B Other Eukaryotes - 202 (source: NCBI BLink).
AT3G16180
gene
9.56
3:05481325
Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves.
AT3G16750
gene
9.22
3:05700998
unknown protein%3B Has 4708 Blast hits to 1416 proteins in 195 species: Archae - 36%3B Bacteria - 1240%3B Metazoa - 1232%3B Fungi - 406%3B Plants - 191%3B Viruses - 23%3B Other Eukaryotes - 1580 (source: NCBI BLink).
AT3G04310
gene
9.08
3:01141043
unknown protein%3B Has 44 Blast hits to 44 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 44%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G16230
gene
9.06
3:05500054
Predicted eukaryotic LigT%3B FUNCTIONS IN: RNA binding%2C catalytic activity%3B INVOLVED IN: RNA metabolic process%2C regulation of transcription%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087)%2C K Homology%2C type 1%2C subgroup (InterPro:IPR018111)%2C K Homology%2C type 1 (InterPro:IPR004088)%2C Predicted eukaryotic LigT (InterPro:IPR009210)%2C RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097)%2C Protein kinase A anchor protein%2C nuclear localisation signal domain (InterPro:IPR019510)%3B BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT (TAIR:AT3G16220.1)%3B Has 263 Blast hits to 258 proteins in 85 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 179%3B Fungi - 13%3B Plants - 46%3B Viruses - 0%3B Other Eukaryotes - 25 (source: NCBI BLink).
AT3G24030
gene
9.06
3:08679819
hydroxyethylthiazole kinase family protein%3B FUNCTIONS IN: catalytic activity%2C hydroxyethylthiazole kinase activity%3B INVOLVED IN: thiamin biosynthetic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Hydroxyethylthiazole kinase (InterPro:IPR000417)%2C Hydroxyethylthiazole kinase%2C monofunctional (InterPro:IPR011144)%3B Has 2753 Blast hits to 2753 proteins in 1214 species: Archae - 124%3B Bacteria - 2340%3B Metazoa - 2%3B Fungi - 135%3B Plants - 43%3B Viruses - 0%3B Other Eukaryotes - 109 (source: NCBI BLink).
AT5G17310
gene
UGP2
9.04
5:05696478
UDP-glucose pyrophosphorylase 2 (UGP2)%3B FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity%2C nucleotidyltransferase activity%3B INVOLVED IN: response to cadmium ion%2C callose deposition in cell wall%2C response to salt stress%2C metabolic process%2C pollen development%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 17 growth stages%3B CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618)%2C Hantavirus nucleocapsid protein (InterPro:IPR002214)%3B BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1)%3B Has 1116 Blast hits to 1112 proteins in 411 species: Archae - 0%3B Bacteria - 382%3B Metazoa - 242%3B Fungi - 229%3B Plants - 150%3B Viruses - 0%3B Other Eukaryotes - 113 (source: NCBI BLink).
AT3G18830
gene
PMT5
8.96
3:06488843
This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone)%2C of cyclic polyols (%3Ci%3Emyo%3C/i%3E-inositol)%2C and of numerous monosaccharides%2C including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.
AT2G47790
gene
8.86
2:19570964
Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1)%3B Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10%3B Bacteria - 2663%3B Metazoa - 3454%3B Fungi - 3073%3B Plants - 916%3B Viruses - 0%3B Other Eukaryotes - 1625 (source: NCBI BLink).
AT3G17800
gene
8.68
3:06091110
mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem
AT2G46060
gene
8.50
2:18941099
transmembrane protein-related%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3522 (InterPro:IPR021910)%2C EGF-like region%2C conserved site (InterPro:IPR013032)%3B Has 154 Blast hits to 154 proteins in 54 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 124%3B Fungi - 0%3B Plants - 21%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT3G18215
gene
8.39
3:06240769
Protein of unknown function%2C DUF599%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function%2C DUF599 (TAIR:AT5G24600.2)%3B Has 303 Blast hits to 303 proteins in 73 species: Archae - 0%3B Bacteria - 107%3B Metazoa - 0%3B Fungi - 0%3B Plants - 182%3B Viruses - 0%3B Other Eukaryotes - 14 (source: NCBI BLink).
AT3G44120
gene
8.37
3:15878399
F-box and associated interaction domains-containing protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 1 (InterPro:IPR006527)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G07140.2)%3B Has 1417 Blast hits to 1367 proteins in 41 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1415%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G18290
gene
BTS
8.19
3:06273966
Encodes BRUTUS (BTS)%2C a putative E3 ligase protein with metal ion binding and DNA binding domains%2C which negatively regulates the response to iron deficiency.
AT1G20090
gene
ROP2
7.95
1:06966842
Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening.
AT3G19240
gene
7.81
3:06664044
Vacuolar import/degradation%2C Vid27-related protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C Vacuolar import/degradation%2C Vid27-related (InterPro:IPR013863)%3B BEST Arabidopsis thaliana protein match is: Vacuolar import/degradation%2C Vid27-related protein (TAIR:AT4G33400.1)%3B Has 312 Blast hits to 307 proteins in 136 species: Archae - 0%3B Bacteria - 1%3B Metazoa - 11%3B Fungi - 168%3B Plants - 82%3B Viruses - 0%3B Other Eukaryotes - 50 (source: NCBI BLink).
AT5G17460
gene
7.76
5:05757073
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to salt stress%3B LOCATED IN: mitochondrion%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G54980
gene
7.57
3:20370205
Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: LATERAL ORGAN JUNCTION (TAIR:AT2G39230.1)%3B Has 66577 Blast hits to 14412 proteins in 313 species: Archae - 5%3B Bacteria - 80%3B Metazoa - 1084%3B Fungi - 1336%3B Plants - 61678%3B Viruses - 0%3B Other Eukaryotes - 2394 (source: NCBI BLink).
AT1G03970
gene
GBF4
7.55
1:01018058
encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.
AT3G28520
gene
7.52
3:10688323
P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: nucleoside-triphosphatase activity%2C ATPase activity%2C nucleotide binding%2C ATP binding%3B LOCATED IN: mitochondrion%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28540.2)%3B Has 19230 Blast hits to 18271 proteins in 2805 species: Archae - 1177%3B Bacteria - 6861%3B Metazoa - 2626%3B Fungi - 2301%3B Plants - 2339%3B Viruses - 37%3B Other Eukaryotes - 3889 (source: NCBI BLink).
AT3G18035
gene
HON4
7.32
3:06168963
A linker histone like protein
AT5G61320
gene
CYP89A3
7.27
5:24655098
member of CYP89A
AT3G15900
gene
7.06
3:05376251
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 26 Blast hits to 26 proteins in 10 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 26%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G11270
gene
MEE34
6.89
3:03528801
maternal effect embryo arrest 34 (MEE34)%3B CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555)%3B BEST Arabidopsis thaliana protein match is: RP non-ATPase subunit 8A (TAIR:AT5G05780.1)%3B Has 1383 Blast hits to 1379 proteins in 243 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 560%3B Fungi - 337%3B Plants - 281%3B Viruses - 0%3B Other Eukaryotes - 205 (source: NCBI BLink).
AT3G17810
gene
PYD1
6.84
3:06093990
Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo%2C but%2C it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.
AT3G18320
gene
6.82
3:06289039
F-box and associated interaction domains-containing protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 1 (InterPro:IPR006527)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G44120.1)%3B Has 1386 Blast hits to 879 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1386%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G16690
gene
SWEET16
6.75
3:05684317
Nodulin MtN3 family protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%2C integral to membrane%2C membrane%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein%2C conserved region (InterPro:IPR018169)%2C RAG1-activating protein 1 homologue (InterPro:IPR018179)%2C RAG1-activating protein-1-related (InterPro:IPR004316)%3B BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT4G15920.1)%3B Has 956 Blast hits to 931 proteins in 112 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 194%3B Fungi - 0%3B Plants - 632%3B Viruses - 0%3B Other Eukaryotes - 130 (source: NCBI BLink).
AT3G17350
gene
6.71
3:05934033
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1)%3B Has 203 Blast hits to 203 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 203%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G14310
gene
PME3
6.53
3:04771833
encodes a pectin methylesterase%2C targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism.
AT3G22950
gene
ARFC1
6.23
3:08136181
A member of ARF GTPase family. A thaliana has 21 members of this family%2C known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica)%2C other ARFs and ARF-like proteins.
AT3G18090
gene
NRPD2B
6.14
3:06194509
Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a%2C but has lower levels of transcription and does not affect endogenous siRNA when mutated.
AT5G41660
gene
6.08
5:16656708
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44430.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT3G16650
gene
5.98
3:05671018
Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1)%3B Has 78035 Blast hits to 32558 proteins in 858 species: Archae - 78%3B Bacteria - 9289%3B Metazoa - 31871%3B Fungi - 16785%3B Plants - 9585%3B Viruses - 0%3B Other Eukaryotes - 10427 (source: NCBI BLink).
AT3G17000
gene
UBC32
5.93
3:05796930
ubiquitin-conjugating enzyme 32 (UBC32)%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)%2C Ubiquitin-conjugating enzyme%2C E2 (InterPro:IPR000608)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2)%3B Has 7916 Blast hits to 7914 proteins in 379 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3544%3B Fungi - 1602%3B Plants - 1492%3B Viruses - 20%3B Other Eukaryotes - 1258 (source: NCBI BLink).
AT1G80360
gene
5.62
1:30208408
Encodes a methionine-specific aminotransferase that uses the ethylene biosynthetic intermediate methionine as an amino donor and the auxin biosynthetic intermediate indole-3-pyruvic acid as an amino acceptor to produce L-tryptophan and 2-oxo-4-methylthiobutyric acid. These actions allow VAS1 to coordinate both auxin and ethylene biosynthesis. It functions downstream of TAA1/SAV3 but upstream of YUCs to negatively modulate IAA biosynthesis directly by altering the 3-IPA pool.
AT3G22240
gene
5.53
3:07863606
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22235.2)%3B Has 177 Blast hits to 177 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 177%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G22060
gene
5.39
3:07770899
contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069%2C however this protein does not have the protein kinase domain
AT3G46610
gene
5.25
3:17159763
Pentatricopeptide repeat (PPR-like) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G14350.1)%3B Has 35826 Blast hits to 11282 proteins in 257 species: Archae - 3%3B Bacteria - 23%3B Metazoa - 290%3B Fungi - 374%3B Plants - 33823%3B Viruses - 0%3B Other Eukaryotes - 1313 (source: NCBI BLink).
AT3G15353
gene
MT3
5.23
3:05180642
metallothionein%2C binds to and detoxifies excess copper and other metals%2C limiting oxidative damage
AT3G16190
gene
5.19
3:05489701
Isochorismatase family protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868)%3B BEST Arabidopsis thaliana protein match is: nicotinamidase 2 (TAIR:AT5G23230.1)%3B Has 6935 Blast hits to 6933 proteins in 1622 species: Archae - 156%3B Bacteria - 6040%3B Metazoa - 0%3B Fungi - 183%3B Plants - 97%3B Viruses - 0%3B Other Eukaryotes - 459 (source: NCBI BLink).
AT3G14100
gene
5.17
3:04672916
RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: mRNA 3'-UTR binding%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: oligouridylate-binding protein 1A (TAIR:AT1G54080.1)%3B Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47%3B Bacteria - 3311%3B Metazoa - 12038%3B Fungi - 6892%3B Plants - 9686%3B Viruses - 3%3B Other Eukaryotes - 1157 (source: NCBI BLink).
AT1G72370
gene
P40
5.08
1:27242845
acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.
AT4G01720
gene
WRKY47
4.97
4:00744804
member of WRKY Transcription Factor%3B Group II-b
AT5G08250
gene
4.78
5:02653554
Cytochrome P450 superfamily protein%3B FUNCTIONS IN: electron carrier activity%2C monooxygenase activity%2C iron ion binding%2C oxygen binding%2C heme binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: male gametophyte%2C flower%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128)%2C Cytochrome P450%2C E-class%2C group I (InterPro:IPR002401)%2C Cytochrome P450%2C conserved site (InterPro:IPR017972)%3B BEST Arabidopsis thaliana protein match is: cytochrome P450%2C family 86%2C subfamily B%2C polypeptide 1 (TAIR:AT5G23190.1)%3B Has 27212 Blast hits to 27118 proteins in 1435 species: Archae - 44%3B Bacteria - 2429%3B Metazoa - 9998%3B Fungi - 5788%3B Plants - 7920%3B Viruses - 3%3B Other Eukaryotes - 1030 (source: NCBI BLink).
AT3G17840
gene
RLK902
4.67
3:06105908
Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.
AT4G32900
gene
4.67
4:15878569
Peptidyl-tRNA hydrolase II (PTH2) family protein%3B FUNCTIONS IN: aminoacyl-tRNA hydrolase activity%3B INVOLVED IN: translation%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase%2C PTH2 (InterPro:IPR002833)%3B BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR:AT3G03010.2)%3B Has 741 Blast hits to 741 proteins in 284 species: Archae - 203%3B Bacteria - 0%3B Metazoa - 192%3B Fungi - 119%3B Plants - 86%3B Viruses - 6%3B Other Eukaryotes - 135 (source: NCBI BLink).
AT3G18820
gene
RAB7B
4.65
3:06484068
RAB GTPase homolog G3F (RAB7B)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: plasma membrane%2C nucleus%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3E (TAIR:AT1G49300.2)%3B Has 26432 Blast hits to 26399 proteins in 759 species: Archae - 38%3B Bacteria - 171%3B Metazoa - 13566%3B Fungi - 4011%3B Plants - 2887%3B Viruses - 20%3B Other Eukaryotes - 5739 (source: NCBI BLink).
AT1G15830
gene
4.59
1:05448060
unknown protein%3B Has 165982 Blast hits to 57214 proteins in 2459 species: Archae - 263%3B Bacteria - 44622%3B Metazoa - 55751%3B Fungi - 10656%3B Plants - 17613%3B Viruses - 2527%3B Other Eukaryotes - 34550 (source: NCBI BLink).
AT3G19650
gene
4.54
3:06823316
cyclin-related%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 5668 Blast hits to 3895 proteins in 309 species: Archae - 0%3B Bacteria - 250%3B Metazoa - 3167%3B Fungi - 631%3B Plants - 477%3B Viruses - 7%3B Other Eukaryotes - 1136 (source: NCBI BLink).
AT3G16570
gene
RALF23
4.51
3:05644593
Encodes RALF23%2C a member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF)%2C and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. RALF23 is significantly downregulated by brassinolide treatment of seedlings. Overexpression of AtRALF23 impairs brassinolide-induced hypocotyls elongation%2C and mature overexpressing plants are shorter and bushier. RALF23 overexpression produces slower growing seedlings with roots that have reduced capacity to acidify the rhizosphere.
AT3G15820
gene
ROD1
4.49
3:05350814
Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase%2C a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway
AT4G19940
gene
4.43
4:10806195
F-box and associated interaction domains-containing protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 3 (InterPro:IPR013187)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G19930.1)%3B Has 2114 Blast hits to 2069 proteins in 48 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 2112%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT1G07350
gene
SR45a
4.42
1:02257384
Encodes a serine/arginine rich-like protein%2C SR45a. Involved in the regulation of stress-responsive alternative splicing.
AT3G20350
gene
4.39
3:07096310
unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: cotyledon%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1)%3B Has 15095 Blast hits to 11224 proteins in 1051 species: Archae - 223%3B Bacteria - 1586%3B Metazoa - 7000%3B Fungi - 1255%3B Plants - 746%3B Viruses - 40%3B Other Eukaryotes - 4245 (source: NCBI BLink).
AT4G30430
gene
TET9
4.38
4:14878783
Member of TETRASPANIN family
AT1G48630
gene
RACK1B_AT
4.36
1:17981636
Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C.
AT5G48540
gene
4.32
5:19668964
receptor-like protein kinase-related family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to karrikin%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902)%3B BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT3G22060.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT3G19170
gene
PREP1
4.30
3:06625377
Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers
AT3G19370
gene
4.28
3:06710349
Plant protein of unknown function (DUF869)%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869%2C plant (InterPro:IPR008587)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT2G23360.1)%3B Has 44099 Blast hits to 25548 proteins in 1425 species: Archae - 637%3B Bacteria - 4297%3B Metazoa - 22352%3B Fungi - 3568%3B Plants - 2188%3B Viruses - 105%3B Other Eukaryotes - 10952 (source: NCBI BLink).
AT2G35075
gene
4.28
2:14786460
unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G17330
gene
ECT6
4.27
3:05916940
evolutionarily conserved C-terminal region 6 (ECT6)%3B CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275)%3B BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 7 (TAIR:AT1G48110.2)%3B Has 985 Blast hits to 959 proteins in 168 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 419%3B Fungi - 125%3B Plants - 349%3B Viruses - 0%3B Other Eukaryotes - 88 (source: NCBI BLink).
AT3G17980
gene
C2
4.24
3:06152062
Calcium-dependent lipid-binding (CaLB domain) family protein%3B CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029)%2C C2 calcium/lipid-binding domain%2C CaLB (InterPro:IPR008973)%2C C2 calcium-dependent membrane targeting (InterPro:IPR000008)%3B BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G48590.2)%3B Has 4930 Blast hits to 4266 proteins in 254 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2771%3B Fungi - 648%3B Plants - 1093%3B Viruses - 0%3B Other Eukaryotes - 418 (source: NCBI BLink).
AT3G25990
gene
4.21
3:09504677
Homeodomain-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C MYB-like (InterPro:IPR017877)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G13450.1)%3B Has 917 Blast hits to 790 proteins in 65 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 139%3B Fungi - 0%3B Plants - 777%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).
AT3G47520
gene
MDH
4.20
3:17512816
Encodes a protein with NAD-dependent malate dehydrogenase activity%2C located in chloroplasts.
AT3G20860
gene
NEK5
4.18
3:07306180
Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.
AT3G15770
gene
4.07
3:05339992
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2)%3B Has 143 Blast hits to 143 proteins in 25 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 136%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink).
AT3G13650
gene
4.03
3:04462841
Disease resistance-responsive (dirigent-like protein) family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: lignan biosynthetic process%2C defense response%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265)%3B BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G55210.2)%3B Has 851 Blast hits to 850 proteins in 44 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 851%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G14720
gene
MPK19
3.99
3:04945601
member of MAP Kinase
AT3G63440
gene
CKX6
3.99
3:23424157
This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase%2C which catalyzes the degradation of cytokinins.
AT5G15550
gene
3.99
5:05058672
Transducin/WD40 repeat-like superfamily protein%3B FUNCTIONS IN: nucleotide binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleolus%2C CUL4 RING ubiquitin ligase complex%2C heterotrimeric G-protein complex%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C NLE (InterPro:IPR012972)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / notchless protein%2C putative (TAIR:AT5G52820.1)%3B Has 33870 Blast hits to 20003 proteins in 673 species: Archae - 44%3B Bacteria - 4918%3B Metazoa - 12445%3B Fungi - 8096%3B Plants - 4252%3B Viruses - 0%3B Other Eukaryotes - 4115 (source: NCBI BLink).
AT3G06483
gene
PDK
3.94
3:01990349
Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1%26#945%3B subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.
AT3G12910
gene
3.93
3:04109375
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein%3B CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441)%3B BEST Arabidopsis thaliana protein match is: NAC domain containing protein 42 (TAIR:AT2G43000.1)%3B Has 2920 Blast hits to 2915 proteins in 75 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 2920%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G13610
gene
3.93
3:04449259
Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake.
AT4G35670
gene
3.91
4:16914599
Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: petal%2C leaf whorl%2C flower%2C carpel%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Parallel beta-helix repeat (InterPro:IPR006626)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1)%3B Has 4255 Blast hits to 4226 proteins in 497 species: Archae - 6%3B Bacteria - 1313%3B Metazoa - 14%3B Fungi - 1277%3B Plants - 1500%3B Viruses - 4%3B Other Eukaryotes - 141 (source: NCBI BLink).
AT3G33530
gene
3.82
3:14085248
Transducin family protein / WD-40 repeat family protein%3B FUNCTIONS IN: nucleotide binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%3B BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G26610.1)%3B Has 166 Blast hits to 141 proteins in 59 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 92%3B Fungi - 4%3B Plants - 46%3B Viruses - 0%3B Other Eukaryotes - 24 (source: NCBI BLink).
AT3G21780
gene
UGT71B6
3.74
3:07674904
Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA)%2C and not its catabolites. Moreover%2C UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer%2C (+)-ABA%2C and not its 'unnatural' relative%2C (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates.
AT2G27740
gene
3.71
2:11822513
Family of unknown function (DUF662) %3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033)%3B BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36410.2)%3B Has 1272 Blast hits to 1189 proteins in 227 species: Archae - 42%3B Bacteria - 139%3B Metazoa - 529%3B Fungi - 66%3B Plants - 146%3B Viruses - 5%3B Other Eukaryotes - 345 (source: NCBI BLink).
AT5G54760
gene
3.70
5:22243800
Translation initiation factor SUI1 family protein%3B FUNCTIONS IN: translation initiation factor activity%3B INVOLVED IN: translational initiation%2C translation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950)%2C Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874)%3B BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT3G22422
gene
None
3.69
None:
None
AT1G32190
gene
3.68
1:11592927
alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: hydrolase activity%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G31020.1)%3B Has 9321 Blast hits to 5856 proteins in 779 species: Archae - 6%3B Bacteria - 1089%3B Metazoa - 5494%3B Fungi - 254%3B Plants - 546%3B Viruses - 17%3B Other Eukaryotes - 1915 (source: NCBI BLink).
AT3G11760
gene
3.68
3:03717894
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1)%3B Has 84 Blast hits to 73 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 84%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G37590
gene
3.65
5:14927185
Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1)%3B Has 6183 Blast hits to 2629 proteins in 327 species: Archae - 94%3B Bacteria - 1884%3B Metazoa - 2136%3B Fungi - 1054%3B Plants - 282%3B Viruses - 0%3B Other Eukaryotes - 733 (source: NCBI BLink).
AT1G43910
gene
3.64
1:16655884
P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: nucleoside-triphosphatase activity%2C ATPase activity%2C nucleotide binding%2C ATP binding%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G05380.1)%3B Has 21538 Blast hits to 20075 proteins in 2875 species: Archae - 1244%3B Bacteria - 8173%3B Metazoa - 2975%3B Fungi - 2572%3B Plants - 2413%3B Viruses - 32%3B Other Eukaryotes - 4129 (source: NCBI BLink).
AT3G28920
gene
HB34
3.62
3:10940305
homeobox protein 34 (HB34)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Homeobox domain%2C ZF-HD class (InterPro:IPR006455)%2C ZF-HD homeobox protein%2C Cys/His-rich dimerisation domain (InterPro:IPR006456)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1)%3B Has 606 Blast hits to 597 proteins in 84 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 33%3B Fungi - 36%3B Plants - 501%3B Viruses - 5%3B Other Eukaryotes - 23 (source: NCBI BLink).
AT5G41930
gene
None
3.62
None:
None
AT2G32130
gene
3.60
2:13654805
Plant protein of unknown function (DUF641)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641%2C plant (InterPro:IPR006943)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT1G29300.1)%3B Has 208 Blast hits to 208 proteins in 30 species: Archae - 0%3B Bacteria - 32%3B Metazoa - 0%3B Fungi - 0%3B Plants - 174%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT3G63350
gene
AT-HSFA7B
3.54
3:23399236
member of Heat Stress Transcription Factor (Hsf) family
AT3G09270
gene
GSTU8
3.52
3:02848183
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
AT5G67160
gene
EPS1
3.51
5:26797596
Encodes a member of the BAHD acyltransferase superfamily. Mutants have enhanced susceptibility to virulent and avirulent pathogens and are defective in pathogen induced SA biosynthesis. EPS1 may act upstream of SA biosynthesis as application of SA can rescue the mutant phenotype.
AT3G10760
gene
3.49
3:03369479
Homeodomain-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1)%3B Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0%3B Bacteria - 3%3B Metazoa - 31%3B Fungi - 6%3B Plants - 1631%3B Viruses - 0%3B Other Eukaryotes - 31 (source: NCBI BLink).
AT3G09670
gene
3.47
3:02966201
Tudor/PWWP/MBT superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313)%3B BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT5G02950.1)%3B Has 880 Blast hits to 796 proteins in 129 species: Archae - 0%3B Bacteria - 16%3B Metazoa - 486%3B Fungi - 43%3B Plants - 152%3B Viruses - 0%3B Other Eukaryotes - 183 (source: NCBI BLink).
AT3G10910
gene
3.47
3:03412911
RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1)%3B Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2174%3B Fungi - 625%3B Plants - 4988%3B Viruses - 47%3B Other Eukaryotes - 1123 (source: NCBI BLink).
AT3G15870
gene
3.46
3:05362888
Fatty acid desaturase family protein%3B FUNCTIONS IN: oxidoreductase activity%2C oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water%3B INVOLVED IN: oxidation reduction%2C lipid metabolic process%3B EXPRESSED IN: sepal%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Fatty acid desaturase%2C type 1%2C core (InterPro:IPR015876)%2C Fatty acid desaturase%2C type 1 (InterPro:IPR005804)%3B BEST Arabidopsis thaliana protein match is: fatty acid desaturase 5 (TAIR:AT3G15850.1)%3B Has 3450 Blast hits to 3450 proteins in 826 species: Archae - 0%3B Bacteria - 1558%3B Metazoa - 797%3B Fungi - 221%3B Plants - 106%3B Viruses - 4%3B Other Eukaryotes - 764 (source: NCBI BLink).
AT4G39450
gene
None
3.45
None:
None
AT1G69890
gene
3.44
1:26323086
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679)%2C Actin cross-linking (InterPro:IPR008999)%3B BEST Arabidopsis thaliana protein match is: Actin cross-linking protein (TAIR:AT1G27100.1)%3B Has 237 Blast hits to 216 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 237%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G21670
gene
3.43
3:07626757
Major facilitator superfamily protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: oligopeptide transport%3B LOCATED IN: membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1)%3B Has 7861 Blast hits to 7524 proteins in 1448 species: Archae - 0%3B Bacteria - 4058%3B Metazoa - 633%3B Fungi - 459%3B Plants - 2170%3B Viruses - 0%3B Other Eukaryotes - 541 (source: NCBI BLink).
AT3G16940
gene
3.42
3:05781418
calmodulin binding%3Btranscription regulators%3B FUNCTIONS IN: calmodulin binding%2C transcription regulator activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683)%2C CG-1 (InterPro:IPR005559)%2C Cell surface receptor IPT/TIG (InterPro:IPR002909)%2C IQ calmodulin-binding region (InterPro:IPR000048)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: calmodulin binding%3Btranscription regulators (TAIR:AT4G16150.1)%3B Has 5766 Blast hits to 3807 proteins in 309 species: Archae - 13%3B Bacteria - 199%3B Metazoa - 3382%3B Fungi - 247%3B Plants - 659%3B Viruses - 23%3B Other Eukaryotes - 1243 (source: NCBI BLink).
AT4G02340
gene
3.38
4:01035596
alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: epoxide hydrolase activity%2C catalytic activity%3B LOCATED IN: peroxisome%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639)%2C Alpha/beta hydrolase fold-1 (InterPro:IPR000073)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1)%3B Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173%3B Bacteria - 16575%3B Metazoa - 610%3B Fungi - 564%3B Plants - 630%3B Viruses - 11%3B Other Eukaryotes - 3768 (source: NCBI BLink).
AT5G12460
gene
3.38
5:04043057
Protein of unknown function (DUF604)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1)%3B Has 562 Blast hits to 553 proteins in 90 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 108%3B Fungi - 170%3B Plants - 273%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT3G06800
gene
None
3.37
None:
None
AT2G16380
gene
3.35
2:07085698
Sec14p-like phosphatidylinositol transfer family protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: transport%3B LOCATED IN: intracellular%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function%2C C-terminal (InterPro:IPR001251)%2C Cellular retinaldehyde-binding/triple function%2C N-terminal (InterPro:IPR008273)%2C Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071)%2C Phosphatidylinositol transfer protein-like%2C N-terminal (InterPro:IPR011074)%3B BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G34580.1)%3B Has 2691 Blast hits to 2676 proteins in 232 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 819%3B Fungi - 614%3B Plants - 876%3B Viruses - 0%3B Other Eukaryotes - 382 (source: NCBI BLink).
AT5G42460
gene
3.34
5:16979773
F-box and associated interaction domains-containing protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 1 (InterPro:IPR006527)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G17830.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G16200
gene
3.34
3:05491398
unknown protein%3B Has 97 Blast hits to 97 proteins in 15 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 0%3B Fungi - 0%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 53 (source: NCBI BLink).
AT2G02320
gene
PP2-B7
3.31
2:00610428
phloem protein 2-B7 (PP2-B7)%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-B8 (TAIR:AT2G02340.1)%3B Has 490 Blast hits to 475 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 490%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G71990
gene
FUT13
3.31
1:27100210
This gene encodes a Lewis-type alpha 1%2C4-fucosyltransferase
AT3G17480
gene
3.31
3:05983196
F-box and associated interaction domains-containing protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 1 (InterPro:IPR006527)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G62270.1)%3B Has 2096 Blast hits to 2033 proteins in 50 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 2094%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT3G16870
gene
GATA17
3.31
3:05763497
Encodes a member of the GATA factor family of zinc finger transcription factors.
AT3G42553
gene
3.31
3:14671479
transposable element gene [Source:TAIR;Acc:AT3G42553]
