AT1G60620
gene
RPAC43
16.23
1:22330894
RNA polymerase I subunit 43 (RPAC43)%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C protein dimerization activity%2C DNA binding%3B INVOLVED IN: transcription%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase%2C insert domain (InterPro:IPR011262)%2C DNA-directed RNA polymerase%2C dimerisation (InterPro:IPR011261)%2C DNA-directed RNA polymerase%2C RpoA/D/Rpb3-type (InterPro:IPR011263)%2C DNA-directed RNA polymerase%2C 30-40kDa subunit%2C conserved site (InterPro:IPR001514)%2C DNA-directed RNA polymerase%2C RBP11-like (InterPro:IPR009025)%3B BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1)%3B Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247%3B Bacteria - 1%3B Metazoa - 281%3B Fungi - 345%3B Plants - 107%3B Viruses - 0%3B Other Eukaryotes - 361 (source: NCBI BLink).
AT4G01740
gene
15.05
4:00753422
Cysteine/Histidine-rich C1 domain family protein%3B CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146)%2C C1-like (InterPro:IPR011424)%3B BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01930.1)%3B Has 1534 Blast hits to 622 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 1528%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT3G23990
gene
HSP60
14.12
3:08668772
mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.
AT4G02410
gene
13.13
4:01059799
Concanavalin A-like lectin protein kinase family protein%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Legume lectin%2C beta chain (InterPro:IPR001220)%2C Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Concanavalin A-like lectin/glucanase%2C subgroup (InterPro:IPR013320)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Concanavalin A-like lectin/glucanase (InterPro:IPR008985)%2C Legume lectin%2C beta chain%2C Mn/Ca-binding site (InterPro:IPR019825)%3B BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G02420.1)%3B Has 115275 Blast hits to 113889 proteins in 4562 species: Archae - 89%3B Bacteria - 12949%3B Metazoa - 42488%3B Fungi - 9587%3B Plants - 33653%3B Viruses - 400%3B Other Eukaryotes - 16109 (source: NCBI BLink).
AT1G63350
gene
12.87
1:23494643
Disease resistance protein (CC-NBS-LRR class) family%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: N-terminal protein myristoylation%2C defense response%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C 4 anthesis%2C LP.08 eight leaves visible%3B CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766)%2C NB-ARC (InterPro:IPR002182)%2C Disease resistance protein (InterPro:IPR000767)%3B BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1)%3B Has 18724 Blast hits to 16763 proteins in 698 species: Archae - 14%3B Bacteria - 926%3B Metazoa - 3029%3B Fungi - 209%3B Plants - 14107%3B Viruses - 4%3B Other Eukaryotes - 435 (source: NCBI BLink).
AT4G01600
gene
12.73
4:00692853
GRAM domain family protein%3B CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182)%3B BEST Arabidopsis thaliana protein match is: FH interacting protein 1 (TAIR:AT1G28200.1)%3B Has 358 Blast hits to 358 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 358%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G05450
gene
MFDX1
12.31
4:02758643
mitochondrial ferredoxin 1 (MFDX1)%3B FUNCTIONS IN: electron carrier activity%2C iron-sulfur cluster binding%2C 2 iron%2C 2 sulfur cluster binding%3B INVOLVED IN: pollen tube development%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041)%2C Adrenodoxin (InterPro:IPR001055)%2C Beta-grasp fold%2C ferredoxin-type (InterPro:IPR012675)%2C Adrenodoxin%2C iron-sulphur binding site (InterPro:IPR018298)%3B BEST Arabidopsis thaliana protein match is: MITOCHONDRIAL FERREDOXIN 2 (TAIR:AT4G21090.3)%3B Has 4425 Blast hits to 4425 proteins in 1188 species: Archae - 2%3B Bacteria - 2167%3B Metazoa - 246%3B Fungi - 135%3B Plants - 85%3B Viruses - 0%3B Other Eukaryotes - 1790 (source: NCBI BLink).
AT2G35800
gene
SAMTL
10.76
2:15043973
Encodes a predicted calcium-dependent S-adenosyl methionine carrier.
AT3G02960
gene
9.86
3:00667245
Heavy metal transport/detoxification superfamily protein %3B FUNCTIONS IN: copper ion binding%2C metal ion binding%3B INVOLVED IN: copper ion transport%2C metal ion transport%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%3B BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1)%3B Has 1622 Blast hits to 1166 proteins in 99 species: Archae - 2%3B Bacteria - 66%3B Metazoa - 18%3B Fungi - 10%3B Plants - 1509%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).
AT2G11890
gene
8.39
2:04802783
adenylate cyclase
AT4G02790
gene
EMB3129
8.22
4:01247327
GTP-binding family protein%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: intracellular%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073)%2C GTP-binding protein%2C HSR1-related (InterPro:IPR002917)%2C GTP-binding protein%2C ribosome biogenesis%2C YlqF (InterPro:IPR019991)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G41670.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G51780
gene
BAG4
7.86
3:19206768
A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins%2C plant homologs of mammalian regulators of apoptosis. BD domain of ATBAG4 had highest similarity to human DB domain of BAG protein. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts%2C as they regulate apoptotic-like processes ranging from pathogen attack%2C to abiotic stress%2C to plant development.
AT4G03020
gene
7.69
4:01331399
transducin family protein / WD-40 repeat family protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat (InterPro:IPR001680)%2C WD repeat protein 23 (InterPro:IPR017399)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT2G48110
gene
REF4
7.36
2:19673293
Encodes a novel protein of unknown function with homologs in non-seed plants. Sequence analysis predicts membrane spanning domains and a putative protein-protein interaction domain. Semi-dominant mutations display defects in phenylpropanoid accumulation suggesting a role in phenylpropanoid metabolism. It has been shown to physically associate with the conserved transcriptional coregulatory complex%2C Mediator%2C and is involved in the regulation of phenylpropanoid homeostasis. Acts redundantly with REF4/MED5b (At3g23590). Required for expression of some dark-upregulated genes.
AT5G05130
gene
7.19
5:01512082
DNA/RNA helicase protein%3B FUNCTIONS IN: in 6 functions%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%2C HIP116%2C Rad5p N-terminal (InterPro:IPR014905)%2C SNF2-related (InterPro:IPR000330)%3B BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G04200
gene
6.43
4:02027165
Microsomal signal peptidase 25 kDa subunit (SPC25)%3B FUNCTIONS IN: peptidase activity%3B INVOLVED IN: signal peptide processing%3B LOCATED IN: integral to membrane%2C signal peptidase complex%3B EXPRESSED IN: male gametophyte%3B CONTAINS InterPro DOMAIN/s: Signal peptidase complex subunit 2 (InterPro:IPR009582)%3B BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 25 kDa subunit (SPC25) (TAIR:AT2G39960.1)%3B Has 162 Blast hits to 160 proteins in 64 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 94%3B Fungi - 2%3B Plants - 60%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink).
AT3G12730
gene
6.34
3:04047012
Homeodomain-like superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G79430.2)%3B Has 1659 Blast hits to 1654 proteins in 62 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 1640%3B Viruses - 0%3B Other Eukaryotes - 18 (source: NCBI BLink).
AT4G01940
gene
NFU1
5.67
4:00841989
Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family%2C more closely related to NFU2 and 3 than to NFU4 and 5. Targeted to the chloroplast.
AT5G66950
gene
5.65
5:26732795
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein%3B FUNCTIONS IN: pyridoxal phosphate binding%2C catalytic activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase%2C major domain (InterPro:IPR015424)%2C Pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1 (InterPro:IPR015421)%3B BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G23520.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G01680
gene
MYB55
5.63
4:00715970
Encodes a putative transcription factor (MYB55).
AT4G04955
gene
ALN
5.48
4:02522034
Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant%2C ataln m2-1%2C did not grow well on the MS medium where allantoin%2C instead of ammonium nitrate%2C was supplied.
AT5G47225
gene
5.41
5:19174589
transposable element gene [Source:TAIR;Acc:AT5G47225]
AT4G01990
gene
5.28
4:00871126
Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02370.1)%3B Has 4131 Blast hits to 2907 proteins in 125 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 3%3B Fungi - 28%3B Plants - 4015%3B Viruses - 0%3B Other Eukaryotes - 77 (source: NCBI BLink).
AT4G03610
gene
5.06
4:01604886
Metallo-hydrolase/oxidoreductase superfamily protein%3B BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT1G30300.1)%3B Has 2341 Blast hits to 2330 proteins in 693 species: Archae - 12%3B Bacteria - 1231%3B Metazoa - 0%3B Fungi - 21%3B Plants - 106%3B Viruses - 0%3B Other Eukaryotes - 971 (source: NCBI BLink).
AT4G23610
gene
5.05
4:12314025
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G46150.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G04830
gene
MSRB5
4.96
4:02445775
methionine sulfoxide reductase B5 (MSRB5)%3B FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cytosol%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579)%2C Mss4-like (InterPro:IPR011057)%3B BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B4 (TAIR:AT4G04810.1)%3B Has 8417 Blast hits to 8406 proteins in 2250 species: Archae - 78%3B Bacteria - 4939%3B Metazoa - 269%3B Fungi - 135%3B Plants - 208%3B Viruses - 1%3B Other Eukaryotes - 2787 (source: NCBI BLink).
AT4G01860
gene
4.90
4:00801032
Transducin family protein / WD-40 repeat family protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1)%3B Has 18202 Blast hits to 10734 proteins in 529 species: Archae - 38%3B Bacteria - 4707%3B Metazoa - 5622%3B Fungi - 3824%3B Plants - 1793%3B Viruses - 0%3B Other Eukaryotes - 2218 (source: NCBI BLink).
AT3G12060
gene
TBL1
4.77
3:03843088
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication).
AT4G01980
gene
4.64
4:00863351
transposable element gene [Source:TAIR;Acc:AT4G01980]
AT4G01480
gene
PPa5
4.63
4:00626069
Encodes a protein that might have inorganic pyrophosphatase activity.
AT4G01610
gene
4.62
4:00694582
Cysteine proteinases superfamily protein%3B FUNCTIONS IN: cysteine-type endopeptidase activity%2C cysteine-type peptidase activity%3B INVOLVED IN: proteolysis%2C regulation of catalytic activity%3B LOCATED IN: vacuole%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase C1A%2C papain (InterPro:IPR013128)%2C Peptidase C1A%2C cathepsin B (InterPro:IPR015643)%2C Peptidase C1A%2C papain C-terminal (InterPro:IPR000668)%2C Peptidase%2C cysteine peptidase active site (InterPro:IPR000169)%2C Peptidase C1A%2C propeptide (InterPro:IPR012599)%3B BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G02305.1)%3B Has 7486 Blast hits to 7443 proteins in 692 species: Archae - 63%3B Bacteria - 158%3B Metazoa - 3254%3B Fungi - 4%3B Plants - 1745%3B Viruses - 146%3B Other Eukaryotes - 2116 (source: NCBI BLink).
AT4G03390
gene
SRF3
4.51
4:01490426
STRUBBELIG-receptor family 3 (SRF3)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway%2C protein amino acid phosphorylation%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Leucine-rich repeat-containing N-terminal domain%2C type 2 (InterPro:IPR013210)%2C Leucine-rich repeat (InterPro:IPR001611)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%3B BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1)%3B Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96%3B Bacteria - 13338%3B Metazoa - 40210%3B Fungi - 7879%3B Plants - 76281%3B Viruses - 315%3B Other Eukaryotes - 16361 (source: NCBI BLink).
AT4G21560
gene
VPS28-1
4.37
4:11468666
vacuolar protein sorting-associated protein 28 homolog 1 (VPS28-1)%3B CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated%2C VPS28%2C N-terminal (InterPro:IPR017898)%2C Vacuolar protein sorting-associated%2C VPS28%2C C-terminal (InterPro:IPR017899)%2C Vacuolar protein sorting-associated%2C VPS28 (InterPro:IPR007143)%3B BEST Arabidopsis thaliana protein match is: Vacuolar protein sorting-associated protein VPS28 family protein (TAIR:AT4G05000.2)%3B Has 388 Blast hits to 387 proteins in 178 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 133%3B Fungi - 146%3B Plants - 72%3B Viruses - 0%3B Other Eukaryotes - 37 (source: NCBI BLink).
AT4G05510
gene
4.37
4:02790193
transposable element gene [Source:TAIR;Acc:AT4G05510]
AT5G64210
gene
AOX2
4.34
5:25683770
encodes an isoform of alternative oxidase%2C which is expressed in rosettes%2C stems%2C and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.
AT4G01410
gene
4.34
4:00578028
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 1 (TAIR:AT3G11660.1)%3B Has 938 Blast hits to 938 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 938%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G47650
gene
4.32
3:17569424
DnaJ/Hsp40 cysteine-rich domain superfamily protein%3B FUNCTIONS IN: unfolded protein binding%2C heat shock protein binding%3B INVOLVED IN: protein folding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ%2C cysteine-rich domain (InterPro:IPR001305)%3B Has 88 Blast hits to 88 proteins in 28 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 0%3B Fungi - 0%3B Plants - 70%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT5G52940
gene
4.27
5:21472103
Protein of unknown function (DUF295)%3B LOCATED IN: mitochondrion%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G52930.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G03180
gene
4.08
4:01403117
CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730)%3B Has 898 Blast hits to 687 proteins in 142 species: Archae - 2%3B Bacteria - 28%3B Metazoa - 200%3B Fungi - 99%3B Plants - 63%3B Viruses - 0%3B Other Eukaryotes - 506 (source: NCBI BLink).
AT4G01270
gene
4.04
4:00532247
RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1)%3B Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145%3B Bacteria - 387%3B Metazoa - 2946%3B Fungi - 366%3B Plants - 512%3B Viruses - 10%3B Other Eukaryotes - 1323 (source: NCBI BLink).
AT4G08470
gene
MEKK3
3.99
4:05383688
Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1%2C also known as ARAKIN%2C MAP3Kb1%2C MAPKKK8)%2C At4g08480 (MEKK2%2C also known as MAP3Kb4%2C MAPKKK9)%2C At4g08470 (MEKK3%2C also known as MAP3Kb3%2C MAPKKK10) and At4g12020 (MEKK4%2C also known as MAP3Kb5%2C MAPKKK11%2C WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002%2C 7(7):301.
AT3G63160
gene
OEP6
3.96
3:23333399
FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast outer membrane%2C thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 (TAIR:AT3G52420.1)%3B Has 26 Blast hits to 26 proteins in 8 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 26%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G22890
gene
3.86
5:07653257
An unique homologue of STOP1 (AT1G34370) in Arabidopsis genome. Transformation to the stop1-mutant activated several genes that are regulated by STOP1%2C and conferred proton sensitive phenotype.
AT2G15660
gene
AGL95
3.86
2:06824242
AGAMOUS-like 95 (AGL95)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 48 (TAIR:AT2G40210.1)%3B Has 310 Blast hits to 309 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 310%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G65590
gene
3.84
5:26211746
Encodes a plant-specific Dof-type transcription factor expressed in maturing guard cells%2C but not in guard mother cells. It regulates essential processes of stomatal guard cell maturation and functions as a key transcription factor regulating the final stages of guard cell differentiation.
AT3G26070
gene
3.84
3:09526687
Plastid-lipid associated protein PAP / fibrillin family protein%3B FUNCTIONS IN: structural molecule activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast%2C plastoglobule%3B CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843)%3B BEST Arabidopsis thaliana protein match is: plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26080.1)%3B Has 483 Blast hits to 479 proteins in 86 species: Archae - 0%3B Bacteria - 99%3B Metazoa - 0%3B Fungi - 0%3B Plants - 334%3B Viruses - 0%3B Other Eukaryotes - 50 (source: NCBI BLink).
AT4G02360
gene
3.80
4:01041086
Protein of unknown function%2C DUF538%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function%2C DUF538 (TAIR:AT1G02813.1)%3B Has 487 Blast hits to 487 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 486%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).
AT2G01060
gene
3.75
2:00073208
myb-like HTH transcriptional regulator family protein%3B CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1)%3B Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0%3B Bacteria - 1%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1660%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).
AT1G80040
gene
3.72
1:30109059
FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G36150
gene
3.71
4:17104542
Disease resistance protein (TIR-NBS-LRR class) family%3B FUNCTIONS IN: transmembrane receptor activity%2C ATP binding%3B INVOLVED IN: signal transduction%2C apoptosis%2C defense response%2C innate immune response%3B LOCATED IN: intrinsic to membrane%2C chloroplast%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182)%2C Toll-Interleukin receptor (InterPro:IPR000157)%2C Disease resistance protein (InterPro:IPR000767)%3B BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45250.1)%3B Has 23119 Blast hits to 17172 proteins in 640 species: Archae - 16%3B Bacteria - 1087%3B Metazoa - 1782%3B Fungi - 109%3B Plants - 19291%3B Viruses - 8%3B Other Eukaryotes - 826 (source: NCBI BLink).
AT4G14430
gene
IBR10
3.69
4:08304442
Encodes a peroxisomal delta3%2C delta2-enoyl CoA isomerase%2C involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.
AT5G15130
gene
WRKY72
3.67
5:04904290
member of WRKY Transcription Factor%3B Group II-b%3B contribute to basal immunity.
AT4G01900
gene
GLB1
3.66
4:00821546
encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.
AT5G66880
gene
SNRK2.3
3.63
5:26710302
encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination%2C dormancy and seedling growth.
AT5G02160
gene
3.61
5:00426226
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast thylakoid membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 121 Blast hits to 121 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 121%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G56650
gene
PPD6
3.61
3:20984635
Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: photosynthesis%3B LOCATED IN: thylakoid%2C thylakoid lumen%2C chloroplast thylakoid lumen%2C chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683)%2C Mog1/PsbP/DUF1795%2C alpha/beta/alpha sandwich (InterPro:IPR016124)%2C Mog1/PsbP%2C alpha/beta/alpha sandwich (InterPro:IPR016123)%3B BEST Arabidopsis thaliana protein match is: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (TAIR:AT1G77090.1)%3B Has 131 Blast hits to 131 proteins in 35 species: Archae - 0%3B Bacteria - 29%3B Metazoa - 0%3B Fungi - 0%3B Plants - 100%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT3G08720
gene
S6K2
3.56
3:02648372
Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin%2C at least in part%2C via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.
AT1G07080
gene
3.55
1:02169977
Thioredoxin superfamily protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: vacuole%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911)%2C Thioredoxin-like fold (InterPro:IPR012336)%3B BEST Arabidopsis thaliana protein match is: gamma interferon responsive lysosomal thiol (GILT) reductase family protein (TAIR:AT5G01580.1)%3B Has 470 Blast hits to 463 proteins in 91 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 320%3B Fungi - 0%3B Plants - 101%3B Viruses - 0%3B Other Eukaryotes - 49 (source: NCBI BLink).
AT4G13280
gene
TPS12
3.54
4:07733114
Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots%2C leaf hydathodes and flower stigmata. Induced by wounding.
AT3G06483
gene
PDK
3.52
3:01990349
Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1%26#945%3B subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.
AT4G03120
gene
3.52
4:01385613
C2H2 and C2HC zinc fingers superfamily protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C U1-C type (InterPro:IPR013085)%2C Zinc finger%2C U1-type (InterPro:IPR003604)%2C Zinc finger%2C C2H2-type matrin (InterPro:IPR000690)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G57870
gene
SK42
3.50
1:21431051
shaggy-like kinase 42 (SK42)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C ATP binding%3B INVOLVED IN: response to salt stress%2C hyperosmotic response%3B LOCATED IN: cytosol%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: shaggy-like protein kinase 41 (TAIR:AT1G09840.6)%3B Has 104123 Blast hits to 103018 proteins in 3860 species: Archae - 88%3B Bacteria - 10212%3B Metazoa - 38684%3B Fungi - 11634%3B Plants - 25207%3B Viruses - 381%3B Other Eukaryotes - 17917 (source: NCBI BLink).
AT4G04490
gene
CRK36
3.48
4:02231717
Encodes a cysteine-rich receptor-like protein kinase.
AT2G17450
gene
RHA3A
3.43
2:07576388
Encodes a putative RING-H2 finger protein RHA3a.
AT3G20610
gene
3.43
3:07196723
non-race specific disease resistance protein%2C putative%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G20600.1)%3B Has 124 Blast hits to 124 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 124%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G27730
gene
3.43
5:09819256
Protein of unknown function (DUF1624)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G47900.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G01800
gene
AGY1
3.42
4:00770722
Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis%2C the absence of which triggers a retrograde signal%2C eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.
AT5G35740
gene
3.42
5:13910312
Carbohydrate-binding X8 domain superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946)%3B BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G04910.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G32580
gene
3.38
1:11783543
plastid developmental protein DAG%2C putative%3B BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG%2C putative (TAIR:AT2G35240.1)%3B Has 256 Blast hits to 233 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 256%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G79960
gene
OFP14
3.32
1:30079665
ovate family protein 14 (OFP14)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458)%3B BEST Arabidopsis thaliana protein match is: ovate family protein 13 (TAIR:AT5G04820.1)%3B Has 451 Blast hits to 451 proteins in 52 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 9%3B Fungi - 29%3B Plants - 394%3B Viruses - 0%3B Other Eukaryotes - 19 (source: NCBI BLink).
AT1G62910
gene
3.31
1:23298948
Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63150.1)%3B Has 124657 Blast hits to 15540 proteins in 305 species: Archae - 10%3B Bacteria - 122%3B Metazoa - 2303%3B Fungi - 2464%3B Plants - 114740%3B Viruses - 0%3B Other Eukaryotes - 5018 (source: NCBI BLink).
