AT5G35100
gene
19.70
5:13359502
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein%3B FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: protein folding%2C peptidyl-cysteine S-nitrosylation%3B LOCATED IN: thylakoid lumen%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%3B BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G34960.1)%3B Has 4654 Blast hits to 4654 proteins in 798 species: Archae - 9%3B Bacteria - 741%3B Metazoa - 1669%3B Fungi - 839%3B Plants - 784%3B Viruses - 0%3B Other Eukaryotes - 612 (source: NCBI BLink).
AT4G29570
gene
16.48
4:14507347
Cytidine/deoxycytidylate deaminase family protein%3B FUNCTIONS IN: hydrolase activity%2C cytidine deaminase activity%2C catalytic activity%2C zinc ion binding%3B INVOLVED IN: cytidine deamination%2C cytidine metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: stamen%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Cytidine deaminase%2C homodimeric (InterPro:IPR006263)%2C APOBEC/CMP deaminase%2C zinc-binding (InterPro:IPR016192)%2C CMP/dCMP deaminase%2C zinc-binding (InterPro:IPR002125)%2C Cytidine deaminase-like (InterPro:IPR016193)%2C Cytidine/deoxycytidylate deaminase%2C zinc-binding domain (InterPro:IPR013171)%3B BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G29580.2)%3B Has 1057 Blast hits to 1055 proteins in 440 species: Archae - 0%3B Bacteria - 888%3B Metazoa - 0%3B Fungi - 0%3B Plants - 129%3B Viruses - 0%3B Other Eukaryotes - 40 (source: NCBI BLink).
AT1G32100
gene
PRR1
15.37
1:11546160
Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.
AT4G39780
gene
14.60
4:18457906
encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.
AT5G48050
gene
14.05
5:19472446
CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G13010
gene
13.24
4:07600510
Oxidoreductase%2C zinc-binding dehydrogenase family protein%3B FUNCTIONS IN: oxidoreductase activity%2C zinc ion binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast%2C plasma membrane%2C vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032)%2C Alcohol dehydrogenase GroES-like (InterPro:IPR013154)%2C Alcohol dehydrogenase%2C C-terminal (InterPro:IPR013149)%2C Alcohol dehydrogenase superfamily%2C zinc-containing (InterPro:IPR002085)%3B BEST Arabidopsis thaliana protein match is: Oxidoreductase%2C zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1)%3B Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549%3B Bacteria - 21108%3B Metazoa - 1143%3B Fungi - 3531%3B Plants - 1393%3B Viruses - 3%3B Other Eukaryotes - 6406 (source: NCBI BLink).
AT4G11670
gene
13.23
4:07044401
FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770)%2C Protein of unknown function DUF810 (InterPro:IPR008528)%2C Mammalian uncoordinated homology 13%2C domain 2 (InterPro:IPR014772)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT5G06970.1)%3B Has 193 Blast hits to 179 proteins in 33 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 6%3B Fungi - 8%3B Plants - 166%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT4G11790
gene
13.20
4:07090313
Pleckstrin homology (PH) domain superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: intracellular transport%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156)%2C Pleckstrin homology-type (InterPro:IPR011993)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G11900
gene
12.98
4:07149903
S-locus lectin protein kinase family protein%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: protein amino acid phosphorylation%2C recognition of pollen%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480)%2C PAN-2 domain (InterPro:IPR013227)%2C Apple-like (InterPro:IPR003609)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C S-locus glycoprotein (InterPro:IPR000858)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61550.1)%3B Has 124676 Blast hits to 123050 proteins in 4525 species: Archae - 110%3B Bacteria - 13929%3B Metazoa - 45657%3B Fungi - 10878%3B Plants - 35196%3B Viruses - 465%3B Other Eukaryotes - 18441 (source: NCBI BLink).
AT4G13860
gene
12.83
4:08022497
RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 2 (TAIR:AT4G13850.4)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G14590
gene
emb2739
12.36
4:08374391
embryo defective 2739 (emb2739)%3B CONTAINS InterPro DOMAIN/s: Integrator complex%2C subunit 3 (InterPro:IPR019333)%3B Has 179 Blast hits to 170 proteins in 63 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 131%3B Fungi - 0%3B Plants - 37%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT4G12910
gene
scpl20
11.32
4:07550238
serine carboxypeptidase-like 20 (scpl20)%3B FUNCTIONS IN: serine-type carboxypeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: vacuole%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S10%2C serine carboxypeptidase (InterPro:IPR001563)%2C Peptidase S10%2C serine carboxypeptidase%2C active site (InterPro:IPR018202)%3B BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 21 (TAIR:AT3G25420.1)%3B Has 4118 Blast hits to 3857 proteins in 425 species: Archae - 0%3B Bacteria - 294%3B Metazoa - 699%3B Fungi - 932%3B Plants - 1620%3B Viruses - 0%3B Other Eukaryotes - 573 (source: NCBI BLink).
AT4G13910
gene
None
11.25
None:
None
AT4G11570
gene
10.64
4:07004265
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein%3B FUNCTIONS IN: hydrolase activity%2C catalytic activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834)%3B BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G10970.1)%3B Has 9886 Blast hits to 9886 proteins in 1971 species: Archae - 106%3B Bacteria - 8631%3B Metazoa - 63%3B Fungi - 26%3B Plants - 330%3B Viruses - 0%3B Other Eukaryotes - 730 (source: NCBI BLink).
AT1G29740
gene
9.65
1:10407220
Leucine-rich repeat transmembrane protein kinase%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Malectin/receptor-like protein kinase (InterPro:IPR021720)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G29730.1)%3B Has 190225 Blast hits to 137512 proteins in 4788 species: Archae - 130%3B Bacteria - 17262%3B Metazoa - 52758%3B Fungi - 10942%3B Plants - 86262%3B Viruses - 458%3B Other Eukaryotes - 22413 (source: NCBI BLink).
AT4G12990
gene
9.36
4:07594230
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plant-type cell wall%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 4 Blast hits to 4 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G42660
gene
9.19
3:14751280
transducin family protein / WD-40 repeat family protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C Protein of unknown function DUF3639 (InterPro:IPR022100)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1)%3B Has 41589 Blast hits to 20655 proteins in 706 species: Archae - 66%3B Bacteria - 8583%3B Metazoa - 14223%3B Fungi - 8894%3B Plants - 4578%3B Viruses - 3%3B Other Eukaryotes - 5242 (source: NCBI BLink).
AT5G47390
gene
9.11
5:19226769
Encodes a circadian-regulated transcription factor which specifically controls cell expansion during leaf development by controlling ROS homeostasis.
AT4G12060
gene
8.76
4:07227971
Double Clp-N motif protein%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: protein metabolic process%3B LOCATED IN: plastid stroma%2C chloroplast%2C chloroplast stroma%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Clp%2C N-terminal (InterPro:IPR004176)%3B BEST Arabidopsis thaliana protein match is: Double Clp-N motif protein (TAIR:AT4G25370.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G40570
gene
8.46
5:16246760
Surfeit locus protein 2 (SURF2)%3B CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833)%3B BEST Arabidopsis thaliana protein match is: Surfeit locus protein 2 (SURF2) (TAIR:AT5G14440.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT1G06730
gene
8.40
1:02067509
pfkB-like carbohydrate kinase family protein%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: D-ribose catabolic process%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611)%3B BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1)%3B Has 14630 Blast hits to 14623 proteins in 2218 species: Archae - 286%3B Bacteria - 12051%3B Metazoa - 104%3B Fungi - 33%3B Plants - 346%3B Viruses - 0%3B Other Eukaryotes - 1810 (source: NCBI BLink).
AT1G56670
gene
8.20
1:21241579
GDSL-like Lipase/Acylhydrolase superfamily protein%3B FUNCTIONS IN: hydrolase activity%2C acting on ester bonds%2C carboxylesterase activity%3B INVOLVED IN: lipid metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Lipase%2C GDSL (InterPro:IPR001087)%3B BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G09390.1)%3B Has 3420 Blast hits to 3380 proteins in 199 species: Archae - 0%3B Bacteria - 256%3B Metazoa - 0%3B Fungi - 41%3B Plants - 3110%3B Viruses - 0%3B Other Eukaryotes - 13 (source: NCBI BLink).
AT4G21110
gene
8.19
4:11267069
G10 family protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: G10 protein (InterPro:IPR001748)%2C BUD31/G10-related%2C conserved site (InterPro:IPR018230)%3B Has 466 Blast hits to 466 proteins in 208 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 189%3B Fungi - 126%3B Plants - 80%3B Viruses - 0%3B Other Eukaryotes - 71 (source: NCBI BLink).
AT1G26100
gene
8.08
1:09022542
Cytochrome b561/ferric reductase transmembrane protein family%3B FUNCTIONS IN: carbon-monoxide oxygenase activity%3B LOCATED IN: endomembrane system%2C integral to membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cytochrome b561%2C eukaryote (InterPro:IPR004877)%2C Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593)%3B BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1)%3B Has 590 Blast hits to 588 proteins in 96 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 373%3B Fungi - 7%3B Plants - 186%3B Viruses - 0%3B Other Eukaryotes - 24 (source: NCBI BLink).
AT5G62820
gene
8.00
5:25223727
Uncharacterised protein family (UPF0497)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%2C membrane%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1)%3B Has 258 Blast hits to 258 proteins in 21 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 2%3B Fungi - 0%3B Plants - 252%3B Viruses - 2%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G11500
gene
7.96
4:06982597
pseudogene, similar to putative receptor-like serine-threonine protein kinase, blastp match of 59% identity and 6.5e-66 P-value to GP [Source:TAIR;Acc:AT4G11500]
AT5G17820
gene
7.13
5:05887871
Peroxidase superfamily protein%3B FUNCTIONS IN: peroxidase activity%2C heme binding%3B INVOLVED IN: oxidation reduction%2C response to oxidative stress%3B LOCATED IN: cell wall%2C membrane%2C plant-type cell wall%3B EXPRESSED IN: root%2C leaf%3B CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255)%2C Plant peroxidase (InterPro:IPR000823)%2C Peroxidases heam-ligand binding site (InterPro:IPR019793)%2C Peroxidase%2C active site (InterPro:IPR019794)%2C Haem peroxidase%2C plant/fungal/bacterial (InterPro:IPR002016)%3B BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G03670.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G77180
gene
SKIP
7.12
1:28999577
Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid%2C salt and osmotic stress.
AT3G62290
gene
ARFA1E
7.10
3:23051544
A member of ARF GTPase family. A thaliana has 21 members of this family%2C known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division%2C cell expansion and cellulose production using antisense construct.
AT4G16780
gene
HB-2
7.05
4:09449114
Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.
AT3G09310
gene
7.04
3:02860402
unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696)%3B Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0%3B Bacteria - 3956%3B Metazoa - 2%3B Fungi - 0%3B Plants - 42%3B Viruses - 3%3B Other Eukaryotes - 1778 (source: NCBI BLink).
AT5G41680
gene
6.71
5:16667769
Protein kinase superfamily protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G64210.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT4G23960
gene
6.63
4:12444765
F-box family protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3)%3B Has 45 Blast hits to 45 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 45%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G11600
gene
GPX6
6.50
4:07009769
Encodes glutathione peroxidase.
AT4G13340
gene
LRX3
6.49
4:07758275
Leucine-rich repeat (LRR) family protein%3B FUNCTIONS IN: structural constituent of cell wall%3B LOCATED IN: cell wall%2C plant-type cell wall%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain%2C type 2 (InterPro:IPR013210)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1)%3B Has 637879 Blast hits to 129296 proteins in 3596 species: Archae - 1468%3B Bacteria - 134638%3B Metazoa - 215120%3B Fungi - 74599%3B Plants - 120849%3B Viruses - 14592%3B Other Eukaryotes - 76613 (source: NCBI BLink).
AT4G12500
gene
6.42
4:07413990
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein%3B FUNCTIONS IN: lipid binding%3B INVOLVED IN: lipid transport%3B EXPRESSED IN: hypocotyl%2C leaf%3B EXPRESSED DURING: LP.04 four leaves visible%3B CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140)%2C Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612)%2C Plant lipid transfer protein/hydrophobic protein%2C helical domain (InterPro:IPR013770)%3B BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12490.1)%3B Has 10886 Blast hits to 4309 proteins in 594 species: Archae - 53%3B Bacteria - 1827%3B Metazoa - 1251%3B Fungi - 647%3B Plants - 4075%3B Viruses - 997%3B Other Eukaryotes - 2036 (source: NCBI BLink).
AT5G60120
gene
TOE2
6.38
5:24207689
target of early activation tagged (EAT) 2 (TOE2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1)%3B Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0%3B Bacteria - 21%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4961%3B Viruses - 7%3B Other Eukaryotes - 53 (source: NCBI BLink).
AT3G03140
gene
6.21
3:00723878
Tudor/PWWP/MBT superfamily protein%3B CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313)%3B BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G21295.1)%3B Has 426 Blast hits to 278 proteins in 85 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 209%3B Fungi - 70%3B Plants - 86%3B Viruses - 0%3B Other Eukaryotes - 47 (source: NCBI BLink).
AT4G13870
gene
WRNEXO
6.16
4:08023237
Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.
AT3G19460
gene
6.15
3:06747268
Reticulon family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endoplasmic reticulum%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388)%3B BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G15280.1)%3B Has 1108 Blast hits to 1108 proteins in 93 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 644%3B Fungi - 4%3B Plants - 444%3B Viruses - 0%3B Other Eukaryotes - 16 (source: NCBI BLink).
AT4G11410
gene
6.14
4:06944891
NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C binding%2C catalytic activity%3B INVOLVED IN: oxidation reduction%2C metabolic process%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040)%2C Glucose/ribitol dehydrogenase (InterPro:IPR002347)%2C Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198)%3B BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2)%3B Has 42058 Blast hits to 41993 proteins in 2806 species: Archae - 320%3B Bacteria - 26803%3B Metazoa - 3444%3B Fungi - 2870%3B Plants - 1627%3B Viruses - 0%3B Other Eukaryotes - 6994 (source: NCBI BLink).
AT1G11440
gene
5.90
1:03849201
BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1)%3B Has 19337 Blast hits to 8589 proteins in 488 species: Archae - 26%3B Bacteria - 641%3B Metazoa - 7852%3B Fungi - 2167%3B Plants - 955%3B Viruses - 616%3B Other Eukaryotes - 7080 (source: NCBI BLink).
AT1G29830
gene
5.72
1:10441053
Magnesium transporter CorA-like family protein%3B FUNCTIONS IN: metal ion transmembrane transporter activity%3B INVOLVED IN: metal ion transport%2C transmembrane transport%3B LOCATED IN: membrane%3B CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein%2C CorA-like (InterPro:IPR002523)%3B BEST Arabidopsis thaliana protein match is: Magnesium transporter CorA-like family protein (TAIR:AT1G29820.2)%3B Has 240 Blast hits to 240 proteins in 100 species: Archae - 0%3B Bacteria - 173%3B Metazoa - 0%3B Fungi - 0%3B Plants - 56%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT4G17680
gene
5.58
4:09842589
SBP (S-ribonuclease binding protein) family protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C S-ribonuclease binding protein%2C SBP1%2C pollen (InterPro:IPR017066)%3B BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT5G47050.1)%3B Has 422 Blast hits to 421 proteins in 63 species: Archae - 0%3B Bacteria - 11%3B Metazoa - 35%3B Fungi - 13%3B Plants - 325%3B Viruses - 3%3B Other Eukaryotes - 35 (source: NCBI BLink).
AT4G18200
gene
None
5.49
None:
None
AT5G59130
gene
5.48
5:23869980
Subtilase family protein%3B FUNCTIONS IN: identical protein binding%2C serine-type endopeptidase activity%3B INVOLVED IN: proteolysis%2C negative regulation of catalytic activity%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137)%2C Peptidase S8/S53%2C subtilisin/kexin/sedolisin (InterPro:IPR000209)%2C Peptidase S8%2C subtilisin-related (InterPro:IPR015500)%2C Peptidase S8/S53%2C subtilisin%2C active site (InterPro:IPR022398)%2C Proteinase inhibitor I9%2C subtilisin propeptide (InterPro:IPR010259)%3B BEST Arabidopsis thaliana protein match is: subtilase 4.13 (TAIR:AT5G59120.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G12760
gene
5.39
4:07504795
unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G67600
gene
5.38
1:25336235
Acid phosphatase/vanadium-dependent haloperoxidase-related protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832)%3B BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G24350.1)%3B Has 1114 Blast hits to 1114 proteins in 408 species: Archae - 0%3B Bacteria - 729%3B Metazoa - 0%3B Fungi - 0%3B Plants - 226%3B Viruses - 0%3B Other Eukaryotes - 159 (source: NCBI BLink).
AT2G23310
gene
ATRER1C1
5.37
2:09917443
Encodes AtRER1C1%2C a Golgi membrane protein involved in returning the molecules that are exported from the endoplasmic reticulum (ER) to the Golgi apparatus back to the ER (a mechanism known as retrieval). There are two Arabidopsis homologues of AtRERC1: AtRER1A and AtRER1B.
AT4G11530
gene
CRK34
5.31
4:06986838
Encodes a cysteine-rich receptor-like protein kinase.
AT3G28925
gene
5.25
3:10957887
BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.2)%3B Has 67 Blast hits to 50 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 13%3B Fungi - 0%3B Plants - 33%3B Viruses - 0%3B Other Eukaryotes - 21 (source: NCBI BLink).
AT1G07820
gene
5.21
1:02421089
Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B CONTAINS InterPro DOMAIN/s: Histone-fold (InterPro:IPR009072)%2C Histone H4%2C conserved site (InterPro:IPR019809)%2C Histone core (InterPro:IPR007125)%2C Histone H4 (InterPro:IPR001951)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1)%3B Has 3184 Blast hits to 3184 proteins in 446 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1794%3B Fungi - 359%3B Plants - 490%3B Viruses - 6%3B Other Eukaryotes - 535 (source: NCBI BLink).
AT4G12110
gene
SMO1-1
5.18
4:07254029
Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4%2C4-dimethyl-9beta%2C19-cyclopropylsterol-4alpha- methyl oxidase.
AT3G30280
gene
5.15
3:11914366
HXXXD-type acyl-transferase family protein%3B FUNCTIONS IN: transferase activity%2C transferring acyl groups other than amino-acyl groups%2C transferase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480)%3B BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G15390.1)%3B Has 2342 Blast hits to 2327 proteins in 132 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 49%3B Plants - 2289%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).
AT4G34940
gene
ARO1
5.06
4:16639526
Armadillo repeat protein. One of a family of four in Arabidopsis. Located in the nucleus and cytoplasm of pollen vegetative cells%2C and in the cytoplasm of egg cells. Involved in the signaling network controlling tip growth and actin organization in the pollen tube.
AT5G51210
gene
OLEO3
5.06
5:20820068
Encodes oleosin3%2C a protein found in oil bodies%2C involved in seed lipid accumulation.
AT4G16410
gene
5.04
4:09261866
unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF751 (InterPro:IPR008470)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G22460
gene
5.00
4:11838960
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein%3B FUNCTIONS IN: lipid binding%3B INVOLVED IN: lipid transport%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: root%3B CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140)%2C Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612)%2C Plant lipid transfer protein/hydrophobic protein%2C helical domain (InterPro:IPR013770)%3B BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1)%3B Has 751 Blast hits to 745 proteins in 61 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 751%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G12980
gene
4.96
4:07589247
Auxin-responsive family protein%3B CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP037471 (InterPro:IPR017214)%2C Cytochrome b561%2C eukaryote (InterPro:IPR004877)%2C Protein of unknown function DUF568%2C DOMON-like (InterPro:IPR007613)%2C DOMON related (InterPro:IPR005018)%2C Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593)%3B BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT3G25290.2)%3B Has 675 Blast hits to 673 proteins in 107 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 91%3B Fungi - 93%3B Plants - 473%3B Viruses - 0%3B Other Eukaryotes - 14 (source: NCBI BLink).
AT4G17000
gene
4.94
4:09566877
unknown protein%3B Has 2862 Blast hits to 2331 proteins in 349 species: Archae - 6%3B Bacteria - 408%3B Metazoa - 833%3B Fungi - 223%3B Plants - 134%3B Viruses - 7%3B Other Eukaryotes - 1251 (source: NCBI BLink).
AT4G15740
gene
4.91
4:08964683
Calcium-dependent lipid-binding (CaLB domain) family protein%3B CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029)%2C C2 calcium/lipid-binding domain%2C CaLB (InterPro:IPR008973)%2C C2 calcium-dependent membrane targeting (InterPro:IPR000008)%3B BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1)%3B Has 658 Blast hits to 447 proteins in 69 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 39%3B Fungi - 33%3B Plants - 570%3B Viruses - 0%3B Other Eukaryotes - 16 (source: NCBI BLink).
AT3G04880
gene
DRT102
4.88
3:01346273
encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).
AT4G08930
gene
APRL6
4.68
4:05729169
Encodes a protein disulfide isomerase-like (PDIL) protein%2C a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.
AT5G50050
gene
4.64
5:20360015
Plant invertase/pectin methylesterase inhibitor superfamily protein%3B FUNCTIONS IN: enzyme inhibitor activity%2C pectinesterase inhibitor activity%2C pectinesterase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501)%3B BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G50040.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G22900
gene
4.63
4:12010080
Protein of unknown function (DUF1191)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G11950.1)%3B Has 128 Blast hits to 128 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 6%3B Plants - 122%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G55650
gene
4.62
3:20647085
Pyruvate kinase family protein%3B FUNCTIONS IN: pyruvate kinase activity%2C potassium ion binding%2C magnesium ion binding%2C catalytic activity%3B INVOLVED IN: glycolysis%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Pyruvate kinase%2C C-terminal-like (InterPro:IPR015795)%2C Pyruvate kinase%2C active site (InterPro:IPR018209)%2C Pyruvate kinase%2C beta-barrel-like (InterPro:IPR011037)%2C Pyruvate kinase%2C alpha/beta (InterPro:IPR015794)%2C Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core (InterPro:IPR015813)%2C Pyruvate kinase (InterPro:IPR001697)%2C Pyruvate kinase%2C barrel (InterPro:IPR015793)%3B BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT3G55810.1)%3B Has 10181 Blast hits to 10077 proteins in 2689 species: Archae - 168%3B Bacteria - 6004%3B Metazoa - 548%3B Fungi - 219%3B Plants - 542%3B Viruses - 0%3B Other Eukaryotes - 2700 (source: NCBI BLink).
AT5G06850
gene
FTIP1
4.61
5:02126944
Encodes an endoplasmic reticulum protein that is involved in the transport of the florigen FT from companion cells to sieve elements%2C thus affecting FT transport through the phloem to the SAM.
AT4G11090
gene
TBL23
4.59
4:06764379
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication).
AT5G60200
gene
TMO6
4.57
5:24240810
Encodes a Dof-type transcription factor.
AT4G13520
gene
SMAP1
4.56
4:07864271
Encodes a small acid protein (SMAP1) that mediates responses Arabidopsis root to the synthetic auxin 2%2C4-Dichlorophenoxyacetic acid.
AT5G24380
gene
YSL2
4.48
5:08323895
closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1
AT4G17050
gene
UGLYAH
4.48
4:09589501
Encodes a protein with ureidoglycine aminohydrolase activity.
AT1G77970
gene
None
4.47
None:
None
AT4G33640
gene
4.46
4:16159548
unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G13850
gene
GR-RBP2
4.41
4:08020713
Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.
AT4G10620
gene
4.30
4:06564183
P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G07410
gene
PCN
4.19
4:04200506
Encodes a WD-40 protein expressed both during embryo development and postembryonically in the SAM and RAM that functions in the auxin pathway%2C integrating auxin signaling in the organization and maintenance of the SAM and RAM.
AT1G21760
gene
FBP7
4.14
1:07649194
This gene is predicted to encode an F-box protein that is evolutionarily conserved between Arabidopsis and other eukaryotes including S.cerevisiae and humans. It may play a role in regulating translation under conditions of temperature stress. FBP7 transcript levels are increased at high and low temperatures.
AT4G14710
gene
ATARD2
4.13
4:08424667
ATARD2%3B FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity%2C metal ion binding%3B INVOLVED IN: L-methionine salvage from methylthioadenosine%2C oxidation reduction%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Cupin%2C RmlC-type (InterPro:IPR011051)%2C Acireductone dioxygenase%2C ARD (InterPro:IPR004313)%2C RmlC-like jelly roll fold (InterPro:IPR014710)%3B BEST Arabidopsis thaliana protein match is: acireductone dioxygenase 1 (TAIR:AT4G14716.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT2G40475
gene
ASG8
4.11
2:16906899
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2)%3B Has 477 Blast hits to 219 proteins in 41 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 91%3B Fungi - 61%3B Plants - 144%3B Viruses - 0%3B Other Eukaryotes - 177 (source: NCBI BLink).
AT1G22840
gene
CYTC-1
4.11
1:08079287
Encodes cytochrome c. Contains two site II (TGGGCC/T) elements%2C which interact with a TCP-domain transcription factor%2C and a downstream internal telomeric repeat%2C and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers.
AT5G50400
gene
PAP27
4.10
5:20523366
purple acid phosphatase 27 (PAP27)%3B FUNCTIONS IN: protein serine/threonine phosphatase activity%2C acid phosphatase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Purple acid phosphatase%2C N-terminal (InterPro:IPR015914)%2C Metallophosphoesterase (InterPro:IPR004843)%2C Purple acid phosphatase-like%2C N-terminal (InterPro:IPR008963)%3B BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT4G11800
gene
4.07
4:07093488
Calcineurin-like metallo-phosphoesterase superfamily protein%3B FUNCTIONS IN: hydrolase activity%2C protein serine/threonine phosphatase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endoplasmic reticulum%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843)%3B BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT2G24810
gene
4.05
2:10573862
Pathogenesis-related thaumatin superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to other organism%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Thaumatin%2C pathogenesis-related (InterPro:IPR001938)%3B BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G19320.1)%3B Has 1365 Blast hits to 1239 proteins in 144 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 51%3B Fungi - 51%3B Plants - 1256%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).
AT4G13510
gene
AMT1%3B1
4.04
4:07858183
Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.
AT4G18000
gene
4.02
4:09989753
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT4G18000]
AT4G13170
gene
4.01
4:07653594
Ribosomal protein L13 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822)%2C Ribosomal protein L13%2C eukaryotic/archaeal (InterPro:IPR005755)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT5G48760.2)%3B Has 1983 Blast hits to 1983 proteins in 630 species: Archae - 297%3B Bacteria - 430%3B Metazoa - 343%3B Fungi - 199%3B Plants - 322%3B Viruses - 0%3B Other Eukaryotes - 392 (source: NCBI BLink).
AT4G10960
gene
UGE5
4.01
4:06715874
Encodes a protein with UDP-D-glucose 4-epimerase activity.
AT5G46090
gene
3.99
5:18693485
Protein of unknown function (DUF679)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT4G18425.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT2G37180
gene
RD28
3.99
2:15617635
a member of the plasma membrane intrinsic protein PIP2. functions as aquaporin and is involved in dessication.
AT4G13750
gene
NOV
3.98
4:07975064
Encodes NO VEIN (NOV)%2C a plant-specific nuclear factor required for leaf vascular development%2C cellular patterning and stem cell maintenance in the root meristem%2C as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception.
AT4G16765
gene
3.97
4:09429629
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C iron ion binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283)%2C Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123)%3B BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G16770.1)%3B Has 8336 Blast hits to 8318 proteins in 997 species: Archae - 0%3B Bacteria - 1160%3B Metazoa - 124%3B Fungi - 1056%3B Plants - 4505%3B Viruses - 0%3B Other Eukaryotes - 1491 (source: NCBI BLink).
AT4G14840
gene
3.96
4:08511487
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22520.1)%3B Has 1681 Blast hits to 1532 proteins in 283 species: Archae - 19%3B Bacteria - 179%3B Metazoa - 579%3B Fungi - 131%3B Plants - 223%3B Viruses - 5%3B Other Eukaryotes - 545 (source: NCBI BLink).
AT5G44860
gene
3.93
5:18110018
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1)%3B Has 233 Blast hits to 227 proteins in 25 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 1%3B Fungi - 0%3B Plants - 216%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).
AT3G18120
gene
3.92
3:06210090
F-box associated ubiquitination effector family protein%3B CONTAINS InterPro DOMAIN/s: F-box associated domain%2C type 1 (InterPro:IPR006527)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G17620.1)%3B Has 649 Blast hits to 629 proteins in 3 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 649%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G19890
gene
3.90
5:06724076
Peroxidase superfamily protein%3B FUNCTIONS IN: peroxidase activity%2C heme binding%3B INVOLVED IN: oxidation reduction%2C response to oxidative stress%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255)%2C Plant peroxidase (InterPro:IPR000823)%2C Peroxidases heam-ligand binding site (InterPro:IPR019793)%2C Haem peroxidase%2C plant/fungal/bacterial (InterPro:IPR002016)%2C Peroxidase%2C active site (InterPro:IPR019794)%3B BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G75830
gene
LCR67
3.84
1:28472357
Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1%2C At5g44420/PDF1.2a%2C At2g26020/PDF1.2b%2C At5g44430/PDF1.2c%2C At2g26010/PDF1.3%2C At1g19610/PDF1.4%2C At1g55010/PDF1.5%2C At2g02120/PDF2.1%2C At2g02100/PDF2.2%2C At2g02130/PDF2.3%2C At1g61070/PDF2.4%2C At5g63660/PDF2.5%2C At2g02140/PDF2.6%2C At5g38330/PDF3.1 and At4g30070/PDF3.2.
AT5G08470
gene
PEX1
3.82
5:02735911
an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.
AT4G16600
gene
PGSIP8
3.82
4:09349741
Nucleotide-diphospho-sugar transferases superfamily protein%3B FUNCTIONS IN: transferase activity%2C transferring hexosyl groups%2C transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: carbohydrate biosynthetic process%2C biosynthetic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl transferase%2C family 8 (InterPro:IPR002495)%3B BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G35710.1)%3B Has 969 Blast hits to 967 proteins in 209 species: Archae - 0%3B Bacteria - 57%3B Metazoa - 248%3B Fungi - 172%3B Plants - 423%3B Viruses - 2%3B Other Eukaryotes - 67 (source: NCBI BLink).
AT2G36840
gene
ACR10
3.78
2:15451520
Encodes a ACT domain-containing protein. The ACT domain%2C named after bacterial aspartate kinase%2C chorismate mutase and TyrA (prephenate dehydrogenase)%2C is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.
AT3G42700
gene
3.76
3:14772634
transposable element gene [Source:TAIR;Acc:AT3G42700]
AT4G16450
gene
3.74
4:09279909
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: photorespiration%3B LOCATED IN: mitochondrion%2C mitochondrial membrane%2C mitochondrial respiratory chain complex I%2C respiratory chain complex I%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G77340
gene
3.72
1:29068343
Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1)%3B Has 44266 Blast hits to 12730 proteins in 287 species: Archae - 5%3B Bacteria - 39%3B Metazoa - 433%3B Fungi - 553%3B Plants - 42031%3B Viruses - 0%3B Other Eukaryotes - 1205 (source: NCBI BLink).
AT3G22231
gene
PCC1
3.71
3:07845823
Encodes a member of a novel 6 member Arabidopsis gene family. Expression of PCC1 is regulated by the circadian clock and is upregulated in response to both virulent and avirulent strains of Pseudomonas syringae pv. tomato.
AT1G73840
gene
ESP1
3.71
1:27763617
Resembles the CstF64 family of RNA processing factors that are conserved between yeast and mammals. In mammals%2C CstF64 is a component of the CstF complex which is required for mRNA 3'end formation along with other factors.
AT1G35720
gene
ANNAT1
3.70
1:13225168
Encodes a member of the annexin gene family%2C a diverse%2C multigene family of calcium-dependent%2C membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT%2C %26#946%3B-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers%2C roots%2Cleaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion. It is a Ca 2+-permeable transporter providing a molecular link between reactive oxygen species and cytosolic Ca 2+ in plants.
AT4G14280
gene
3.70
4:08222467
ARM repeat superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18980.1)%3B Has 563 Blast hits to 446 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 563%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G36720
gene
HVA22K
3.69
4:17307709
HVA22-like protein K (HVA22K)%3B CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345)%3B BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1)%3B Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 701%3B Fungi - 226%3B Plants - 493%3B Viruses - 0%3B Other Eukaryotes - 95 (source: NCBI BLink).
AT3G24360
gene
3.66
3:08839670
ATP-dependent caseinolytic (Clp) protease/crotonase family protein%3B FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity%2C catalytic activity%3B INVOLVED IN: fatty acid beta-oxidation%2C metabolic process%3B LOCATED IN: membrane%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Crotonase%2C core (InterPro:IPR001753)%3B BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1)%3B Has 20885 Blast hits to 20875 proteins in 1799 species: Archae - 367%3B Bacteria - 14429%3B Metazoa - 898%3B Fungi - 583%3B Plants - 486%3B Viruses - 0%3B Other Eukaryotes - 4122 (source: NCBI BLink).
AT2G31790
gene
3.65
2:13518199
UDP-Glycosyltransferase superfamily protein%3B FUNCTIONS IN: UDP-glycosyltransferase activity%2C transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1)%3B Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0%3B Bacteria - 847%3B Metazoa - 2565%3B Fungi - 65%3B Plants - 5076%3B Viruses - 120%3B Other Eukaryotes - 84 (source: NCBI BLink).
AT1G74070
gene
3.64
1:27851460
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein%3B FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: protein folding%3B LOCATED IN: chloroplast thylakoid lumen%2C chloroplast%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%3B BEST Arabidopsis thaliana protein match is: cyclophilin 20-2 (TAIR:AT5G13120.1)%3B Has 3262 Blast hits to 3261 proteins in 458 species: Archae - 0%3B Bacteria - 134%3B Metazoa - 1442%3B Fungi - 557%3B Plants - 702%3B Viruses - 0%3B Other Eukaryotes - 427 (source: NCBI BLink).
AT2G18940
gene
3.64
2:08203705
Tetratricopeptide repeat (TPR)-like superfamily protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1)%3B Has 70772 Blast hits to 15680 proteins in 317 species: Archae - 4%3B Bacteria - 89%3B Metazoa - 1190%3B Fungi - 1125%3B Plants - 65689%3B Viruses - 0%3B Other Eukaryotes - 2675 (source: NCBI BLink).
AT2G11830
gene
3.64
2:04771865
transposable element gene [Source:TAIR;Acc:AT2G11830]
AT5G02330
gene
3.64
5:00487114
Cysteine/Histidine-rich C1 domain family protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C DC1 (InterPro:IPR004146)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C C1-like (InterPro:IPR011424)%3B BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G02350.1)%3B Has 1223 Blast hits to 610 proteins in 32 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 23%3B Fungi - 0%3B Plants - 1196%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).
AT5G53520
gene
OPT8
3.63
5:21743366
Encodes an oligopeptide transporter. Target promoter of the male germline-specific transcription factor DUO1.
AT1G57680
gene
Cand1
3.62
1:21362359
FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971)%3B Has 70 Blast hits to 70 proteins in 19 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 66%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).
AT5G47580
gene
ASG7
3.62
5:19294813
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G60990
gene
3.62
1:22462026
Encodes a chloroplast-localized COG0354 protein that requires folate for its function in Fe/S cluster biogenesis.
AT5G48920
gene
TED7
3.58
5:19835337
tracheary element differentiation-related 7 (TED7)%3B BEST Arabidopsis thaliana protein match is: tracheary element differentiation-related 6 (TAIR:AT1G43790.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G57540
gene
XTH13
3.57
5:23302787
Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET%3B EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH%3B EC 3.2.1.151) activity.
AT5G22720
gene
3.57
5:07549565
F-box/RNI-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596)%2C F-box domain%2C cyclin-like (InterPro:IPR001810)%2C FBD-like (InterPro:IPR006566)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C Leucine-rich repeat 2 (InterPro:IPR013101)%3B BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G22730.1)%3B Has 2105 Blast hits to 2068 proteins in 31 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 9%3B Fungi - 0%3B Plants - 2094%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT5G67530
gene
PUB49
3.56
5:26941074
plant U-box 49 (PUB49)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: protein folding%2C protein ubiquitination%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%2C U box domain (InterPro:IPR003613)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site (InterPro:IPR020892)%3B BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G11920
gene
CCS52A2
3.55
4:07160243
Encodes a putative activator of the anaphase-promoting complex/cyclosome. Promotes exit from the cell cycle and entry into the endocycle leading to endoreduplication. Mutation of this gene results in abnormal shoot apical meristem development. It likely regulates the development of meristems by indirectly interacting with WUS and CLV3.
AT5G01280
gene
3.55
5:00113921
Encodes a microtubule-associated protein.
AT1G55320
gene
AAE18
3.54
1:20633096
Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.
AT4G12400
gene
Hop3
3.53
4:07338018
Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010%2C Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.
AT3G12810
gene
PIE1
3.53
3:04065042
Encodes a protein similar to ATP-dependent%2C chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC%2C MAF4%2C MAF6).
AT1G73240
gene
3.52
1:27542147
CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049)%3B Has 36 Blast hits to 36 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 35%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G06483
gene
PDK
3.52
3:01990349
Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1%26#945%3B subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.
AT3G16940
gene
3.51
3:05781418
calmodulin binding%3Btranscription regulators%3B FUNCTIONS IN: calmodulin binding%2C transcription regulator activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683)%2C CG-1 (InterPro:IPR005559)%2C Cell surface receptor IPT/TIG (InterPro:IPR002909)%2C IQ calmodulin-binding region (InterPro:IPR000048)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: calmodulin binding%3Btranscription regulators (TAIR:AT4G16150.1)%3B Has 5766 Blast hits to 3807 proteins in 309 species: Archae - 13%3B Bacteria - 199%3B Metazoa - 3382%3B Fungi - 247%3B Plants - 659%3B Viruses - 23%3B Other Eukaryotes - 1243 (source: NCBI BLink).
AT1G05170
gene
3.49
1:01490974
Galactosyltransferase family protein%3B FUNCTIONS IN: transferase activity%2C transferring hexosyl groups%2C transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: protein amino acid glycosylation%3B LOCATED IN: membrane%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C 4 leaf senescence stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Glycosyl transferase%2C family 31 (InterPro:IPR002659)%3B BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1)%3B Has 1301 Blast hits to 1292 proteins in 94 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 677%3B Fungi - 0%3B Plants - 603%3B Viruses - 0%3B Other Eukaryotes - 21 (source: NCBI BLink).
AT2G33070
gene
NSP2
3.49
2:14028282
Encodes a nitrile-specifier protein NSP2. NSP2 is one out of five (At3g16400/NSP1%2C At2g33070/NSP2%2C At3g16390/NSP3%2C At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile%2C but not epithionitrile or thiocyanate formation.
AT3G17930
gene
DAC
3.46
3:06142125
Encodes a thylakoid membrane protein involved in the accumulation of the cytochrome b6/f complex.
AT4G10030
gene
3.45
4:06270241
alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: hydrolase activity%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G52570.1)%3B Has 3883 Blast hits to 3883 proteins in 1174 species: Archae - 26%3B Bacteria - 2816%3B Metazoa - 266%3B Fungi - 159%3B Plants - 102%3B Viruses - 3%3B Other Eukaryotes - 511 (source: NCBI BLink).
AT2G44650
gene
CHL-CPN10
3.45
2:18419370
Encodes a chloroplast-localized chaperonin 10 whose mRNA is expressed in leaves and stems but not roots.
AT2G04270
gene
RNEE/G
3.44
2:01474679
Similar to E.coli endoribonuclease E. Functions as a ribonuclease%2C is located in the chloroplast%2C and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.
AT1G80460
gene
NHO1
3.42
1:30246683
Encodes a protein similar to glycerol kinase%2C which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.
AT1G30970
gene
SUF4
3.41
1:11040250
Encodes SUF4 (SUPPRESSOR of FRI 4)%2C a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C)%2C a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus.
AT4G17610
gene
3.39
4:09804954
tRNA/rRNA methyltransferase (SpoU) family protein%3B FUNCTIONS IN: RNA binding%2C RNA methyltransferase activity%3B INVOLVED IN: RNA processing%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase%2C SpoU (InterPro:IPR001537)%3B Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7%3B Bacteria - 4787%3B Metazoa - 103%3B Fungi - 50%3B Plants - 109%3B Viruses - 0%3B Other Eukaryotes - 1574 (source: NCBI BLink).
AT4G37170
gene
3.38
4:17498411
Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1)%3B Has 43848 Blast hits to 14238 proteins in 253 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 20%3B Fungi - 118%3B Plants - 43065%3B Viruses - 0%3B Other Eukaryotes - 633 (source: NCBI BLink).
AT3G16420
gene
PBP1
3.36
3:05579290
The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10%2C when tissues are damaged and subcellular structures are destroyed by pests.
AT4G34770
gene
3.36
4:16591179
SAUR-like auxin-responsive protein family %3B CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676)%3B BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1)%3B Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1410%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).
AT4G10820
gene
3.35
4:06648009
F-box family protein%3B BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT5G25290.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G24240
gene
3.35
1:08586335
Ribosomal protein L19 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C intracellular%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT4G11630.1)%3B Has 7931 Blast hits to 7931 proteins in 2663 species: Archae - 0%3B Bacteria - 5364%3B Metazoa - 103%3B Fungi - 54%3B Plants - 151%3B Viruses - 0%3B Other Eukaryotes - 2259 (source: NCBI BLink).
AT3G06090
gene
3.34
3:01840714
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: flower%2C leaf%2C seed%3B EXPRESSED DURING: petal differentiation and expansion stage%2C LP.08 eight leaves visible%2C E expanded cotyledon stage%3B Has 7 Blast hits to 7 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 7%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G37400
gene
3.34
5:14834208
Family of unknown function (DUF577)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598)%3B BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT5G37650.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT2G06005
gene
FIP1
3.34
2:02332317
Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005%2C FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.
AT4G12320
gene
CYP706A6
3.34
4:07313779
member of CYP706A
AT2G13780
gene
None
3.32
None:
None
AT2G42300
gene
3.32
2:17620895
basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G57800.2)%3B Has 2090 Blast hits to 2084 proteins in 92 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 11%3B Fungi - 16%3B Plants - 2063%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G72300
gene
PSY1R
3.31
1:27217368
Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion.
