AT1G67680
gene
39.11
1:25365756
SRP72 RNA-binding domain%3B FUNCTIONS IN: 7S RNA binding%3B INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane%3B LOCATED IN: signal recognition particle%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Signal recognition particle%2C SRP72 subunit%2C RNA-binding (InterPro:IPR013699)%3B BEST Arabidopsis thaliana protein match is: SRP72 RNA-binding domain (TAIR:AT1G67650.1)%3B Has 655 Blast hits to 637 proteins in 232 species: Archae - 21%3B Bacteria - 65%3B Metazoa - 237%3B Fungi - 154%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 136 (source: NCBI BLink).
AT1G67792
gene
35.36
1:25417378
Potential natural antisense gene%2C locus overlaps with AT1G67790
AT1G67820
gene
34.74
1:25429750
Protein phosphatase 2C family protein%3B FUNCTIONS IN: protein serine/threonine phosphatase activity%2C catalytic activity%3B INVOLVED IN: protein amino acid dephosphorylation%3B LOCATED IN: protein serine/threonine phosphatase complex%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C%2C manganese/magnesium aspartate binding site (InterPro:IPR000222)%2C Protein phosphatase 2C-related (InterPro:IPR001932)%2C Protein phosphatase 2C%2C N-terminal (InterPro:IPR014045)%3B BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1)%3B Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6%3B Bacteria - 120%3B Metazoa - 1758%3B Fungi - 815%3B Plants - 2713%3B Viruses - 9%3B Other Eukaryotes - 1312 (source: NCBI BLink).
AT1G69460
gene
20.53
1:26111688
emp24/gp25L/p24 family/GOLD family protein%3B FUNCTIONS IN: protein transmembrane transporter activity%3B INVOLVED IN: intracellular protein transport%2C transport%3B LOCATED IN: endoplasmic reticulum%2C membrane%3B EXPRESSED IN: guard cell%2C callus%3B CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038)%2C emp24/gp25L/p24 (InterPro:IPR000348)%3B BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G26690.1)%3B Has 1501 Blast hits to 1499 proteins in 239 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 645%3B Fungi - 467%3B Plants - 241%3B Viruses - 0%3B Other Eukaryotes - 148 (source: NCBI BLink).
AT1G67550
gene
URE
16.48
1:25312660
Encodes a nickel-containing urea hydrolase involved in nitrogen recycling. It requires three urease accessory proteins for its activation.
AT1G68795
gene
CLE12
16.07
1:25840626
Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
AT1G68490
gene
13.04
1:25693449
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2)%3B Has 125 Blast hits to 125 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 125%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G66590
gene
COX19-1
12.97
1:24840899
cytochrome c oxidase 19-1 (COX19-1)%3B CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)%3B BEST Arabidopsis thaliana protein match is: cytochrome c oxidase 19-2 (TAIR:AT1G69750.1)%3B Has 290 Blast hits to 290 proteins in 159 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 77%3B Fungi - 106%3B Plants - 52%3B Viruses - 0%3B Other Eukaryotes - 55 (source: NCBI BLink).
AT1G69250
gene
12.65
1:26032637
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: transport%2C nucleocytoplasmic transport%3B LOCATED IN: intracellular%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nuclear transport factor 2%2C Eukaryote (InterPro:IPR018222)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT2G03640.1)%3B Has 1427 Blast hits to 1403 proteins in 215 species: Archae - 0%3B Bacteria - 26%3B Metazoa - 793%3B Fungi - 209%3B Plants - 296%3B Viruses - 0%3B Other Eukaryotes - 103 (source: NCBI BLink).
AT2G27020
gene
PAG1
10.84
2:11528230
Encodes 20S proteasome alpha 7 subunit PAG1.
AT5G42980
gene
TRX3
10.22
5:17242607
encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.
AT1G66670
gene
CLPP3
9.77
1:24863734
One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).
AT1G67620
gene
9.40
1:25340353
Lojap-related protein%3B CONTAINS InterPro DOMAIN/s: Iojap-related protein (InterPro:IPR004394)%3B Has 4659 Blast hits to 4659 proteins in 1794 species: Archae - 0%3B Bacteria - 3277%3B Metazoa - 93%3B Fungi - 0%3B Plants - 60%3B Viruses - 0%3B Other Eukaryotes - 1229 (source: NCBI BLink).
AT1G67850
gene
8.42
1:25437900
Protein of unknown function (DUF707)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2)%3B Has 324 Blast hits to 323 proteins in 26 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 0%3B Fungi - 0%3B Plants - 305%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink).
AT1G67970
gene
HSFA8
8.30
1:25484449
member of Heat Stress Transcription Factor (Hsf) family
AT1G69430
gene
8.20
1:26097729
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1)%3B Has 216 Blast hits to 215 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 216%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G69010
gene
BIM2
8.10
1:25941629
Encodes BES1-INTERACTING MYC-LIKE 2 (BIM2)%2C a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings.
AT1G60010
gene
7.59
1:22095285
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1)%3B Has 185 Blast hits to 185 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 3%3B Plants - 180%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT1G25350
gene
OVA9
7.37
1:08889018
ovule abortion 9 (OVA9)%3B FUNCTIONS IN: glutamine-tRNA ligase activity%3B INVOLVED IN: glutamyl-tRNA aminoacylation%2C translation%2C ovule development%3B LOCATED IN: cytosol%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase%2C class I%2C conserved site (InterPro:IPR001412)%2C Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C alpha-bundle domain (InterPro:IPR020061)%2C Ribosomal protein L25/Gln-tRNA synthetase%2C beta-barrel domain (InterPro:IPR020056)%2C Glutaminyl-tRNA synthetase%2C class Ic%2C non-specific RNA-binding region part 1 (InterPro:IPR007639)%2C Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C N-terminal (InterPro:IPR020060)%2C Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain (InterPro:IPR011035)%2C Glutaminyl-tRNA synthetase%2C class Ic%2C non-specific RNA-binding region part 2 (InterPro:IPR007638)%2C Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain (InterPro:IPR020058)%2C Glutamyl/glutaminyl-tRNA synthetase%2C class Ic (InterPro:IPR000924)%2C Glutaminyl-tRNA synthetase%2C class Ic (InterPro:IPR004514)%2C Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C anti-codon binding domain (InterPro:IPR020059)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain (TAIR:AT5G19720.1)%3B Has 13124 Blast hits to 13109 proteins in 2954 species: Archae - 262%3B Bacteria - 8524%3B Metazoa - 443%3B Fungi - 410%3B Plants - 177%3B Viruses - 0%3B Other Eukaryotes - 3308 (source: NCBI BLink).
AT2G30040
gene
MAPKKK14
7.37
2:12821569
member of MEKK subfamily
AT5G45010
gene
DSS1(V)
7.21
5:18166898
DSS1 homolog on chromosome V (DSS1(V))%3B CONTAINS InterPro DOMAIN/s: DSS1/SEM1 (InterPro:IPR007834)%3B BEST Arabidopsis thaliana protein match is: deletion of SUV3 suppressor 1(I) (TAIR:AT1G64750.2)%3B Has 302 Blast hits to 302 proteins in 127 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 134%3B Fungi - 75%3B Plants - 68%3B Viruses - 0%3B Other Eukaryotes - 25 (source: NCBI BLink).
AT1G60950
gene
FED A
6.92
1:22444307
encodes a major leaf ferredoxin
AT2G40800
gene
6.88
2:17024255
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56430.1)%3B Has 43 Blast hits to 43 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 41%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT5G08040
gene
TOM5
6.61
5:02577006
mitochondrial import receptor subunit TOM5 homolog (TOM5)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%2C plastid%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B Has 27 Blast hits to 27 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 27%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G14270
gene
6.56
1:04874875
CAAX amino terminal protease family protein%3B INVOLVED IN: proteolysis%3B LOCATED IN: membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675)%3B BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1)%3B Has 3763 Blast hits to 3760 proteins in 994 species: Archae - 88%3B Bacteria - 3260%3B Metazoa - 0%3B Fungi - 0%3B Plants - 134%3B Viruses - 0%3B Other Eukaryotes - 281 (source: NCBI BLink).
AT4G34180
gene
6.00
4:16369357
Cyclase family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to salt stress%3B LOCATED IN: cell wall%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325)%3B BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G02480
gene
5.86
3:00512220
Late embryogenesis abundant protein (LEA) family protein%3B BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT5G38760.1)%3B Has 213 Blast hits to 189 proteins in 38 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 9%3B Fungi - 12%3B Plants - 190%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT1G17490
gene
5.74
1:06008437
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1)%3B Has 57 Blast hits to 45 proteins in 9 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 57%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G68238
gene
5.67
1:25574381
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G39570
gene
5.63
5:15843881
FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cytosol%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G66820
gene
5.34
1:24929887
glycine-rich protein%3B Has 4612 Blast hits to 1114 proteins in 179 species: Archae - 18%3B Bacteria - 331%3B Metazoa - 2059%3B Fungi - 93%3B Plants - 1513%3B Viruses - 136%3B Other Eukaryotes - 462 (source: NCBI BLink).
AT3G62030
gene
ROC4
5.21
3:22973004
nuclear-encoded chloroplast stromal cyclophilin CYP20-3 (also known as ROC4). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.
AT1G66580
gene
SAG24
5.21
1:24839090
senescence associated gene 24 (SAG24)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: response to UV-B%2C translation%3B LOCATED IN: cytosolic ribosome%2C ribosome%2C cytosolic large ribosomal subunit%2C plasma membrane%2C vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197)%2C Ribosomal protein L10e/L16 (InterPro:IPR016180)%2C Ribosomal protein L10e%2C conserved site (InterPro:IPR018255)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G26910.1)%3B Has 1679 Blast hits to 1677 proteins in 605 species: Archae - 325%3B Bacteria - 13%3B Metazoa - 562%3B Fungi - 162%3B Plants - 159%3B Viruses - 0%3B Other Eukaryotes - 458 (source: NCBI BLink).
AT1G69210
gene
5.14
1:26018438
Uncharacterised protein family UPF0090%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 (InterPro:IPR003728)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 (TAIR:AT1G77122.1)%3B Has 169 Blast hits to 169 proteins in 64 species: Archae - 0%3B Bacteria - 102%3B Metazoa - 0%3B Fungi - 0%3B Plants - 61%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink).
AT5G64080
gene
XYP1
5.12
5:25645209
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein%3B FUNCTIONS IN: lipid binding%3B INVOLVED IN: lipid transport%3B LOCATED IN: anchored to plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140)%2C Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612)%2C Plant lipid transfer protein/Par allergen (InterPro:IPR000528)%2C Plant lipid transfer protein/hydrophobic protein%2C helical domain (InterPro:IPR013770)%3B BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G13820.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G70730
gene
PGM2
5.08
1:26668646
Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type%2C loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.
AT2G40765
gene
5.05
2:17012176
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%2C mitochondrial respiratory chain complex III%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B Has 32 Blast hits to 32 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 32%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G23000
gene
5.01
1:08143227
Heavy metal transport/detoxification superfamily protein %3B FUNCTIONS IN: metal ion binding%3B INVOLVED IN: metal ion transport%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%3B BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.1)%3B Has 2286 Blast hits to 2008 proteins in 133 species: Archae - 0%3B Bacteria - 60%3B Metazoa - 111%3B Fungi - 41%3B Plants - 1285%3B Viruses - 0%3B Other Eukaryotes - 789 (source: NCBI BLink).
AT2G15010
gene
5.01
2:06484338
Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100%2C At5g36910%2C At1g72260%2C At2g15010%2C At1g12663%2C At1g12660.
AT5G18525
gene
-5.14
5:06146725
Encodes a BEACH domain containing protein that is involved in targeting storage proteins to the protein storage vacuoles and effector triggered immunity to Psuedomonas syringae.
AT1G59980
gene
ARL2
-5.24
1:22080689
ARG1-like 2 (ARL2)%3B FUNCTIONS IN: unfolded protein binding%2C heat shock protein binding%3B INVOLVED IN: protein folding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: embryo%2C leaf whorl%2C carpel%2C seed%3B EXPRESSED DURING: F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Molecular chaperone%2C heat shock protein%2C Hsp40%2C DnaJ (InterPro:IPR015609)%2C Heat shock protein DnaJ%2C N-terminal (InterPro:IPR001623)%2C Heat shock protein DnaJ (InterPro:IPR003095)%2C Heat shock protein DnaJ%2C conserved site (InterPro:IPR018253)%3B BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1)%3B Has 25507 Blast hits to 25492 proteins in 3344 species: Archae - 188%3B Bacteria - 10073%3B Metazoa - 4427%3B Fungi - 2514%3B Plants - 2606%3B Viruses - 73%3B Other Eukaryotes - 5626 (source: NCBI BLink).
AT5G14500
gene
-5.28
5:04674213
aldose 1-epimerase family protein%3B FUNCTIONS IN: carbohydrate binding%2C isomerase activity%2C aldose 1-epimerase activity%2C catalytic activity%3B INVOLVED IN: galactose metabolic process%2C carbohydrate metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013)%2C Aldose 1-epimerase (InterPro:IPR008183)%2C Glycoside hydrolase-type carbohydrate-binding%2C subgroup (InterPro:IPR014718)%3B BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G11410
gene
-5.30
1:03840877
S-locus lectin protein kinase family protein%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: protein amino acid phosphorylation%2C recognition of pollen%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480)%2C Apple-like (InterPro:IPR003609)%2C PAN-2 domain (InterPro:IPR013227)%2C S-locus receptor kinase%2C C-terminal (InterPro:IPR021820)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C EGF-like%2C type 3 (InterPro:IPR000742)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C S-locus glycoprotein (InterPro:IPR000858)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%2C Concanavalin A-like lectin/glucanase (InterPro:IPR008985)%3B BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1)%3B Has 122302 Blast hits to 120413 proteins in 4701 species: Archae - 118%3B Bacteria - 13948%3B Metazoa - 44921%3B Fungi - 9999%3B Plants - 35002%3B Viruses - 441%3B Other Eukaryotes - 17873 (source: NCBI BLink).
AT3G06290
gene
SAC3B
-5.53
3:01898877
SAC3/GANP/Nin1/mts3/eIF-3 p25 family%3B CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062)%3B BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G54380.1)%3B Has 1557 Blast hits to 1047 proteins in 222 species: Archae - 0%3B Bacteria - 35%3B Metazoa - 487%3B Fungi - 321%3B Plants - 148%3B Viruses - 0%3B Other Eukaryotes - 566 (source: NCBI BLink).
AT2G24960
gene
-5.67
2:10617116
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2)%3B Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 39%3B Plants - 1363%3B Viruses - 0%3B Other Eukaryotes - 50 (source: NCBI BLink).
AT4G20060
gene
EMB1895
-5.70
4:10854487
EMBRYO DEFECTIVE 1895 (EMB1895)%3B FUNCTIONS IN: binding%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024)%3B Has 205 Blast hits to 155 proteins in 64 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 163%3B Fungi - 0%3B Plants - 34%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink).
AT3G16120
gene
-5.91
3:05464728
Dynein light chain type 1 family protein%3B FUNCTIONS IN: microtubule motor activity%3B INVOLVED IN: microtubule-based process%3B LOCATED IN: microtubule associated complex%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Dynein light chain%2C type 1/2 (InterPro:IPR001372)%3B BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 (TAIR:AT1G52240.2)%3B Has 1266 Blast hits to 1264 proteins in 223 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 664%3B Fungi - 103%3B Plants - 251%3B Viruses - 0%3B Other Eukaryotes - 248 (source: NCBI BLink).
AT1G10450
gene
SNL6
-6.21
1:03431764
Encodes SIN3-like 6%2C a homolog of the transcriptional repressor SIN3 (AT1G24190).
AT2G47070
gene
SPL1
-6.22
2:19336653
member of SPL gene family%2C encodes DNA binding proteins and putative transcription factors. All have the SBP-box%2C which encodes the SBP-domain%2C required for and sufficient for interaction with DNA.
AT3G26300
gene
CYP71B34
-6.42
3:09638954
putative cytochrome P450
AT1G11060
gene
-6.99
1:03684568
Encodes one of two redundant proteins (the other is WAPL2) that are involved in prophase removal of cohesion during meiosis. Double mutants with wapl2 exhibit reduced fertility due to defects in meiosis and also some abnormal embryo development in rare cases where embryos are formed.
AT1G68870
gene
SOFL2
-7.65
1:25889074
AtSOFL1 acts redundantly with AtSOFL2 as positive regulator of cytokinin levels and cytokinin-mediated development.
AT1G13980
gene
GN
-8.30
1:04788463
Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class%2C and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division%2C expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association%2C however%2C GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.
AT1G50790
gene
-8.67
1:18823822
Plant mobile domain protein family%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Aminotransferase-like%2C plant mobile domain (InterPro:IPR019557)%3B BEST Arabidopsis thaliana protein match is: Aminotransferase-like%2C plant mobile domain family protein (TAIR:AT1G50820.1)%3B Has 578 Blast hits to 565 proteins in 32 species: Archae - 2%3B Bacteria - 2%3B Metazoa - 14%3B Fungi - 6%3B Plants - 524%3B Viruses - 0%3B Other Eukaryotes - 30 (source: NCBI BLink).
AT1G70630
gene
-8.88
1:26631112
Nucleotide-diphospho-sugar transferase family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endoplasmic reticulum%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388)%2C Nucleotide-diphospho-sugar transferase%2C predicted (InterPro:IPR005069)%3B BEST Arabidopsis thaliana protein match is: xyloglucanase 113 (TAIR:AT2G35610.1)%3B Has 427 Blast hits to 427 proteins in 34 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 379%3B Viruses - 0%3B Other Eukaryotes - 48 (source: NCBI BLink).
AT1G67440
gene
emb1688
-10.59
1:25263757
embryo defective 1688 (emb1688)%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: embryo development ending in seed dormancy%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C EngC GTPase (InterPro:IPR010914)%2C GTPase EngC (InterPro:IPR004881)%3B BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G67460.1)%3B Has 5395 Blast hits to 5393 proteins in 2047 species: Archae - 18%3B Bacteria - 4575%3B Metazoa - 3%3B Fungi - 0%3B Plants - 65%3B Viruses - 0%3B Other Eukaryotes - 734 (source: NCBI BLink).
AT1G70510
gene
KNAT2
-10.87
1:26576486
A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition%2C KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings%2C while in mature plants the gene is primarily expressed in flowers and inflorescence stems.
AT1G68862
gene
-11.44
1:25886673
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
AT1G68460
gene
IPT1
-11.92
1:25668610
Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP)%2C but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.
AT1G70110
gene
-14.58
1:26406238
Concanavalin A-like lectin protein kinase family protein%3B FUNCTIONS IN: carbohydrate binding%2C kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Legume lectin%2C beta chain (InterPro:IPR001220)%2C Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Concanavalin A-like lectin/glucanase%2C subgroup (InterPro:IPR013320)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Concanavalin A-like lectin/glucanase (InterPro:IPR008985)%3B BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G29050.1)%3B Has 126598 Blast hits to 125056 proteins in 4848 species: Archae - 112%3B Bacteria - 14508%3B Metazoa - 46132%3B Fungi - 11267%3B Plants - 35367%3B Viruses - 464%3B Other Eukaryotes - 18748 (source: NCBI BLink).
AT1G68872
gene
-14.60
1:25889284
Unknown gene
AT1G67365
gene
-15.60
1:25238395
Potential natural antisense gene%2C locus overlaps with AT1G67370
AT1G68160
gene
-16.42
1:25545758
Protein of unknown function (DUF3755)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2)%3B Has 154 Blast hits to 154 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 145%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink).
AT1G69020
gene
-23.77
1:25943886
Prolyl oligopeptidase family protein%3B FUNCTIONS IN: serine-type peptidase activity%2C serine-type endopeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S9%2C prolyl oligopeptidase%2C catalytic domain (InterPro:IPR001375)%2C Peptidase S9A%2C oligopeptidase%2C N-terminal beta-propeller (InterPro:IPR004106)%2C Peptidase S9A%2C prolyl oligopeptidase (InterPro:IPR002470)%3B BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT5G66960.1)%3B Has 6703 Blast hits to 6563 proteins in 1132 species: Archae - 51%3B Bacteria - 2817%3B Metazoa - 295%3B Fungi - 25%3B Plants - 196%3B Viruses - 0%3B Other Eukaryotes - 3319 (source: NCBI BLink).
AT1G67650
gene
-48.82
1:25359612
SRP72 RNA-binding domain%3B FUNCTIONS IN: 7S RNA binding%3B INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane%3B LOCATED IN: signal recognition particle%3B CONTAINS InterPro DOMAIN/s: Signal recognition particle%2C SRP72 subunit%2C RNA-binding (InterPro:IPR013699)%3B BEST Arabidopsis thaliana protein match is: SRP72 RNA-binding domain (TAIR:AT1G67680.1)%3B Has 433 Blast hits to 428 proteins in 197 species: Archae - 4%3B Bacteria - 29%3B Metazoa - 154%3B Fungi - 136%3B Plants - 31%3B Viruses - 0%3B Other Eukaryotes - 79 (source: NCBI BLink).
