Interaction network for RSM_4_17.55
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Show the eQTL profiles of traits with a LOD score above the threshold at the selected locus.
Trait (count=9) Type Name LOD score Position Description
AT4G37320 gene CYP81D5 9.60 4:17559378 member of CYP81D
AT4G37210 gene 7.77 4:17512254 Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G37370 gene CYP81D8 7.04 4:17569740 member of CYP81D
AT4G37330 gene CYP81D4 6.67 4:17562317 member of CYP81D
AT4G37280 gene 6.66 4:17546577 MRG family protein%3B FUNCTIONS IN: chromatin binding%3B INVOLVED IN: chromatin assembly or disassembly%3B LOCATED IN: chromatin%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase%2C NuA4 complex%2C Eaf3/MRG15 subunit (InterPro:IPR017398)%2C MRG (InterPro:IPR008676)%2C Chromo domain (InterPro:IPR000953)%3B BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT1G02740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G36770 gene 6.55 4:17330146 UDP-Glycosyltransferase superfamily protein%3B FUNCTIONS IN: UDP-glycosyltransferase activity%2C transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: embryo%2C sepal%2C flower%2C pedicel%2C synergid%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72E1 (TAIR:AT3G50740.1)%3B Has 8229 Blast hits to 8179 proteins in 484 species: Archae - 0%3B Bacteria - 520%3B Metazoa - 2565%3B Fungi - 32%3B Plants - 4963%3B Viruses - 88%3B Other Eukaryotes - 61 (source: NCBI BLink).
AT1G28140 gene 5.15 1:09831876 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301%2C transmembrane (InterPro:IPR019275)%3B Has 140 Blast hits to 140 proteins in 72 species: Archae - 0%3B Bacteria - 86%3B Metazoa - 10%3B Fungi - 0%3B Plants - 41%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).
AT4G37100 gene 5.11 4:17479173 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein%3B FUNCTIONS IN: pyridoxal phosphate binding%2C catalytic activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase%2C major domain (InterPro:IPR015424)%2C Pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1 (InterPro:IPR015421)%3B BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G23520.1)%3B Has 644 Blast hits to 541 proteins in 145 species: Archae - 9%3B Bacteria - 25%3B Metazoa - 119%3B Fungi - 163%3B Plants - 272%3B Viruses - 0%3B Other Eukaryotes - 56 (source: NCBI BLink).
AT4G36970 gene 5.06 4:17429744 Remorin family protein%3B FUNCTIONS IN: DNA binding%3B LOCATED IN: plasma membrane%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Remorin%2C C-terminal (InterPro:IPR005516)%3B BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G45207.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).