AT3G47250
gene
126.67
3:17399757
Plant protein of unknown function (DUF247)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247%2C plant (InterPro:IPR004158)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G47200.2)%3B Has 1106 Blast hits to 1004 proteins in 19 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1106%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G46370
gene
111.87
3:17051520
Leucine-rich repeat protein kinase family protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway%2C protein amino acid phosphorylation%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Leucine-rich repeat%2C typical subtype (InterPro:IPR003591)%2C Leucine-rich repeat (InterPro:IPR001611)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46400.1)%3B Has 158526 Blast hits to 120263 proteins in 4504 species: Archae - 95%3B Bacteria - 12978%3B Metazoa - 44044%3B Fungi - 9573%3B Plants - 73487%3B Viruses - 375%3B Other Eukaryotes - 17974 (source: NCBI BLink).
AT3G60980
gene
111.05
3:22565309
Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: glutamine-rich protein 23 (TAIR:AT1G10270.1)%3B Has 2028 Blast hits to 1422 proteins in 60 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 2019%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT3G45860
gene
CRK4
110.02
3:16863088
Encodes a cysteine-rich receptor-like protein kinase. Involved in programmed cell death and defense response to pathogen.
AT3G47220
gene
PLC9
101.19
3:17387883
Encodes a plasma membrane-localized phosphoinositide-specific phospholipase C with a role in thermotolerance.
AT3G47070
gene
98.42
3:17336592
LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584)%3B Has 37 Blast hits to 37 proteins in 10 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 37%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G46980
gene
PHT4%3B3
92.87
3:17306599
Encodes an inorganic phosphate transporter (PHT4%3B3).
AT3G45910
gene
76.08
3:16876338
unknown protein%3B Has 3 Blast hits to 3 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 3%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G46500
gene
73.00
3:17120351
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C iron ion binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: root%3B CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283)%2C Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123)%3B BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1)%3B Has 7979 Blast hits to 7962 proteins in 970 species: Archae - 0%3B Bacteria - 1125%3B Metazoa - 119%3B Fungi - 1055%3B Plants - 4286%3B Viruses - 0%3B Other Eukaryotes - 1394 (source: NCBI BLink).
AT3G46530
gene
RPP13
70.46
3:17130300
Confers resistance to the biotrophic oomycete%2C Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.
AT3G47510
gene
69.50
3:17510981
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 11 growth stages%3B Has 15 Blast hits to 15 proteins in 7 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 15%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G46440
gene
UXS5
63.51
3:17089013
encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose%2C which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.
AT3G45730
gene
60.79
3:16789780
unknown protein%3B Has 3 Blast hits to 3 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 3%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G47295
gene
57.92
3:17427950
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 13 Blast hits to 13 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 13%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G45930
gene
55.04
3:16883316
Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B CONTAINS InterPro DOMAIN/s: Histone H4%2C conserved site (InterPro:IPR019809)%2C Histone-fold (InterPro:IPR009072)%2C Histone H4 (InterPro:IPR001951)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1)%3B Has 3178 Blast hits to 3178 proteins in 446 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1790%3B Fungi - 358%3B Plants - 490%3B Viruses - 6%3B Other Eukaryotes - 534 (source: NCBI BLink).
AT3G45590
gene
SEN1
54.44
3:16732540
Encodes a catalytic subunit of tRNA splicing endonuclease.
AT3G46010
gene
ADF1
49.24
3:16909217
Actin-depolymerizing factor (ADF) and cofilin define a family of actin-binding proteins essential for the rapid turnover of filamentous actin in vivo.
AT3G48640
gene
48.54
3:18021356
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66670.2)%3B Has 42 Blast hits to 42 proteins in 3 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G47810
gene
MAG1
40.93
3:17637122
Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.
AT3G47550
gene
38.64
3:17523367
RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to salt stress%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1)%3B Has 1858 Blast hits to 1855 proteins in 210 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 851%3B Fungi - 126%3B Plants - 608%3B Viruses - 31%3B Other Eukaryotes - 242 (source: NCBI BLink).
AT3G47540
gene
38.31
3:17520958
Chitinase family protein%3B FUNCTIONS IN: chitinase activity%3B INVOLVED IN: carbohydrate metabolic process%2C cell wall macromolecule catabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C family 19 (InterPro:IPR016283)%2C Glycoside hydrolase%2C family 19%2C catalytic (InterPro:IPR000726)%3B BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1)%3B Has 1501 Blast hits to 1495 proteins in 261 species: Archae - 0%3B Bacteria - 181%3B Metazoa - 9%3B Fungi - 3%3B Plants - 1299%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT3G46930
gene
35.47
3:17285565
Protein kinase superfamily protein%3B FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity%2C kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1)%3B Has 131220 Blast hits to 129723 proteins in 5271 species: Archae - 120%3B Bacteria - 14071%3B Metazoa - 50237%3B Fungi - 12125%3B Plants - 33600%3B Viruses - 536%3B Other Eukaryotes - 20531 (source: NCBI BLink).
AT3G45740
gene
34.95
3:16790761
hydrolase family protein / HAD-superfamily protein%3B FUNCTIONS IN: copper ion binding%2C zinc ion binding%3B INVOLVED IN: metabolic process%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase%2C subfamily IIA%2C CECR5 (InterPro:IPR006353)%2C HAD-superfamily hydrolase%2C subfamily IIA (InterPro:IPR006357)%3B Has 548 Blast hits to 526 proteins in 159 species: Archae - 8%3B Bacteria - 6%3B Metazoa - 128%3B Fungi - 307%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 63 (source: NCBI BLink).
AT3G48080
gene
29.85
3:17752463
alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: lipase activity%2C triglyceride lipase activity%2C signal transducer activity%3B INVOLVED IN: lipid metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Lipase%2C class 3 (InterPro:IPR002921)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1)%3B Has 522 Blast hits to 472 proteins in 44 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 0%3B Fungi - 2%3B Plants - 484%3B Viruses - 0%3B Other Eukaryotes - 32 (source: NCBI BLink).
AT3G46110
gene
29.48
3:16931991
LOCATED IN: plasma membrane%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369)%2C Uncharacterised conserved protein UCP031043 (InterPro:IPR021182)%3B BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1)%3B Has 195 Blast hits to 168 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 195%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G45710
gene
28.39
3:16782588
Major facilitator superfamily protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: oligopeptide transport%3B LOCATED IN: membrane%3B EXPRESSED IN: root%3B CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter%2C conserved site (InterPro:IPR018456)%2C Oligopeptide transporter (InterPro:IPR000109)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45700.1)%3B Has 3682 Blast hits to 3580 proteins in 536 species: Archae - 2%3B Bacteria - 690%3B Metazoa - 461%3B Fungi - 187%3B Plants - 2116%3B Viruses - 0%3B Other Eukaryotes - 226 (source: NCBI BLink).
AT3G46450
gene
28.14
3:17092848
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: transport%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function%2C C-terminal (InterPro:IPR001251)%3B BEST Arabidopsis thaliana protein match is: SEC14-like 3 (TAIR:AT2G21540.2)%3B Has 1063 Blast hits to 1063 proteins in 190 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 180%3B Fungi - 333%3B Plants - 448%3B Viruses - 0%3B Other Eukaryotes - 102 (source: NCBI BLink).
AT3G45960
gene
EXLA3
25.89
3:16892702
member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al%2C 2004. Plant Mol Bio)
AT3G48560
gene
CSR1
25.41
3:18001283
Catalyzes the formation of acetolactate from pyruvate%2C the first step in valine and isoleucine biosynthesis. Requires FAD%2C thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide%2C chlorsulphuron%2C and the imidazolinone herbicide%2C imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS%2C EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.
AT3G48530
gene
KING1
25.24
3:17987378
SNF1-related protein kinase regulatory subunit gamma 1 (KING1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plant-type cell wall%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase%2C core (InterPro:IPR000644)%3B BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G69800.1)%3B Has 3278 Blast hits to 3263 proteins in 1076 species: Archae - 152%3B Bacteria - 2121%3B Metazoa - 342%3B Fungi - 134%3B Plants - 135%3B Viruses - 0%3B Other Eukaryotes - 394 (source: NCBI BLink).
AT3G47780
gene
ABCA7
24.69
3:17624340
member of ATH subfamily
AT3G47010
gene
24.06
3:17316635
Glycosyl hydrolase family protein%3B FUNCTIONS IN: hydrolase activity%2C hydrolyzing O-glycosyl compounds%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C family 3%2C N-terminal (InterPro:IPR001764)%2C Glycoside hydrolase%2C family 3%2C C-terminal (InterPro:IPR002772)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C family 3%2C active site (InterPro:IPR019800)%3B BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47000.1)%3B Has 10470 Blast hits to 9681 proteins in 1554 species: Archae - 69%3B Bacteria - 6453%3B Metazoa - 14%3B Fungi - 1551%3B Plants - 481%3B Viruses - 0%3B Other Eukaryotes - 1902 (source: NCBI BLink).
AT3G47750
gene
ABCA4
23.28
3:17606359
member of ATH subfamily
AT3G48410
gene
20.01
3:17923551
alpha/beta-Hydrolases superfamily protein%3B CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1)%3B Has 1039 Blast hits to 1035 proteins in 267 species: Archae - 10%3B Bacteria - 561%3B Metazoa - 10%3B Fungi - 51%3B Plants - 319%3B Viruses - 0%3B Other Eukaryotes - 88 (source: NCBI BLink).
AT3G46580
gene
MBD5
19.59
3:17148232
Protein containing a putative methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.
AT3G45940
gene
18.69
3:16886226
Glycosyl hydrolases family 31 protein%3B FUNCTIONS IN: hydrolase activity%2C hydrolyzing O-glycosyl compounds%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: embryo%2C sepal%2C pedicel%2C flower%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C family 31 (InterPro:IPR000322)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%3B BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1)%3B Has 5440 Blast hits to 5077 proteins in 1113 species: Archae - 86%3B Bacteria - 3115%3B Metazoa - 813%3B Fungi - 823%3B Plants - 272%3B Viruses - 2%3B Other Eukaryotes - 329 (source: NCBI BLink).
AT3G46030
gene
HTB11
18.31
3:16913384
HTB11%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1)%3B Has 3283 Blast hits to 3268 proteins in 331 species: Archae - 0%3B Bacteria - 1%3B Metazoa - 2245%3B Fungi - 203%3B Plants - 469%3B Viruses - 0%3B Other Eukaryotes - 365 (source: NCBI BLink).
AT3G48130
gene
RSU1
17.76
3:17774952
ribosomal protein L13 homolog [Source:TAIR;Acc:AT3G48130]
AT3G47670
gene
17.69
3:17574785
Plant invertase/pectin methylesterase inhibitor superfamily protein%3B FUNCTIONS IN: enzyme inhibitor activity%2C pectinesterase inhibitor activity%2C pectinesterase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501)%3B BEST Arabidopsis thaliana protein match is: pectin methylesterase 1 (TAIR:AT1G53840.1)%3B Has 898 Blast hits to 891 proteins in 45 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 898%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G47800
gene
17.57
3:17634804
Galactose mutarotase-like superfamily protein%3B FUNCTIONS IN: aldose 1-epimerase activity%3B INVOLVED IN: galactose metabolic process%2C hexose metabolic process%2C carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013)%2C Aldose 1-epimerase (InterPro:IPR008183)%2C Aldose 1-epimerase%2C subgroup (InterPro:IPR015443)%2C Glycoside hydrolase-type carbohydrate-binding%2C subgroup (InterPro:IPR014718)%3B BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1)%3B Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5%3B Bacteria - 3197%3B Metazoa - 273%3B Fungi - 257%3B Plants - 219%3B Viruses - 0%3B Other Eukaryotes - 712 (source: NCBI BLink).
AT3G47640
gene
PYE
17.27
3:17567126
Encodes POPEYE (PYE)%2C a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.
AT3G45970
gene
EXLA1
16.85
3:16896166
member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al%2C 2004. Plant Mol Bio)
AT3G46600
gene
16.73
3:17157585
GRAS family transcription factor%3B CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202)%3B BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G59450.1)%3B Has 2508 Blast hits to 2402 proteins in 303 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 2%3B Fungi - 0%3B Plants - 2499%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G48350
gene
CEP3
16.09
3:17905725
Cysteine proteinases superfamily protein%3B FUNCTIONS IN: cysteine-type endopeptidase activity%2C cysteine-type peptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase C1A%2C papain (InterPro:IPR013128)%2C Proteinase inhibitor I29%2C cathepsin propeptide (InterPro:IPR013201)%2C Peptidase C1A%2C papain C-terminal (InterPro:IPR000668)%2C Peptidase%2C cysteine peptidase active site (InterPro:IPR000169)%3B BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G48340.1)%3B Has 7872 Blast hits to 7811 proteins in 728 species: Archae - 57%3B Bacteria - 251%3B Metazoa - 3274%3B Fungi - 4%3B Plants - 1942%3B Viruses - 134%3B Other Eukaryotes - 2210 (source: NCBI BLink).
AT3G45010
gene
scpl48
15.99
3:16466144
serine carboxypeptidase-like 48 (scpl48)%3B FUNCTIONS IN: serine-type carboxypeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S10%2C serine carboxypeptidase (InterPro:IPR001563)%2C Peptidase S10%2C serine carboxypeptidase%2C active site (InterPro:IPR018202)%3B BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1)%3B Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0%3B Bacteria - 135%3B Metazoa - 672%3B Fungi - 884%3B Plants - 1462%3B Viruses - 0%3B Other Eukaryotes - 397 (source: NCBI BLink).
AT3G47630
gene
15.77
3:17562941
FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222)%3B Has 325 Blast hits to 325 proteins in 172 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 109%3B Fungi - 140%3B Plants - 43%3B Viruses - 0%3B Other Eukaryotes - 33 (source: NCBI BLink).
AT3G46700
gene
15.55
3:17200167
UDP-Glycosyltransferase superfamily protein%3B FUNCTIONS IN: UDP-glycosyltransferase activity%2C transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: metabolic process%3B EXPRESSED IN: root%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G46680.1)%3B Has 7564 Blast hits to 7513 proteins in 424 species: Archae - 0%3B Bacteria - 384%3B Metazoa - 2020%3B Fungi - 23%3B Plants - 5006%3B Viruses - 70%3B Other Eukaryotes - 61 (source: NCBI BLink).
AT3G46820
gene
TOPP5
13.81
3:17241702
Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase%2C expressed in roots%2C shoots and flowers.
AT3G47390
gene
PHS1
13.63
3:17459339
Encodes a protein that is believed to function as a pyrimidine reductase involved in riboflavin and FAD biosynthesis. phs1 was identified as a photosensitive mutant that shows reduced growth%2C chloroplast developmental abnormalities%2C reduced chlorophyll levels%2C increased oxidative stress%2C reduced NADPH/NADP+ ratios%2C reduced photosystem I electron transport%2C and reduced photosynthetic protein levels under high light conditions. Many of these abnormal phenotypes likely arise from the reduction in the levels of FAD in the phs1 mutant.
AT3G43790
gene
ZIFL2
13.33
3:15655319
zinc induced facilitator-like 2 (ZIFL2)%3B CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846)%2C Major facilitator superfamily MFS-1 (InterPro:IPR011701)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1)%3B Has 22616 Blast hits to 21614 proteins in 2597 species: Archae - 368%3B Bacteria - 16981%3B Metazoa - 1046%3B Fungi - 2343%3B Plants - 376%3B Viruses - 0%3B Other Eukaryotes - 1502 (source: NCBI BLink).
AT3G47370
gene
13.06
3:17453423
Ribosomal protein S10p/S20e family protein%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%3B INVOLVED IN: translation%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S10%2C conserved site (InterPro:IPR018268)%2C Ribosomal protein S10%2C eukaryotic/archaeal (InterPro:IPR005729)%2C Ribosomal protein S10 (InterPro:IPR001848)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S10p/S20e family protein (TAIR:AT5G62300.2)%3B Has 7480 Blast hits to 7480 proteins in 2601 species: Archae - 270%3B Bacteria - 4741%3B Metazoa - 380%3B Fungi - 140%3B Plants - 182%3B Viruses - 0%3B Other Eukaryotes - 1767 (source: NCBI BLink).
AT3G47060
gene
ftsh7
12.73
3:17332926
encodes an FtsH protease that is localized to the chloroplast
AT2G22940
gene
12.64
2:09761655
BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G45560.1)%3B Has 4 Blast hits to 4 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G48770
gene
12.36
3:18078452
DNA binding%3BATP binding%3B FUNCTIONS IN: DNA binding%2C ATP binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C BED-type predicted (InterPro:IPR003656)%2C ATPase-like%2C ATP-binding domain (InterPro:IPR003594)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1)%3B Has 779 Blast hits to 661 proteins in 171 species: Archae - 6%3B Bacteria - 159%3B Metazoa - 152%3B Fungi - 67%3B Plants - 310%3B Viruses - 0%3B Other Eukaryotes - 85 (source: NCBI BLink).
AT3G48720
gene
DCF
10.84
3:18046144
Encodes a hydroxycinnamoyl-CoA: v-hydroxy fatty acid transferase involved in cutin synthesis. Mutants are almost devoid of ferulic acid.
AT3G45780
gene
PHOT1
10.79
3:16816721
Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening%2C chloroplast accumulation%2C leaf flattening%2C and phototropism%2C and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.
AT3G43300
gene
ATMIN7
10.75
3:15233845
AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1%2C a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome.
AT3G48200
gene
10.64
3:17832770
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 210 Blast hits to 148 proteins in 42 species: Archae - 0%3B Bacteria - 118%3B Metazoa - 0%3B Fungi - 0%3B Plants - 48%3B Viruses - 0%3B Other Eukaryotes - 44 (source: NCBI BLink).
AT3G45870
gene
UMAMIT3
10.43
3:16867033
nodulin MtN21-like transporter family protein
AT3G47950
gene
HA4
10.37
3:17692666
mutant has Slight reduction in root and shoot growth%3B Exaggerated defects in salt stress%3B Plasma Membrane H+ ATPase
AT3G45880
gene
10.30
3:16868914
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein%3B INVOLVED IN: phospholipid biosynthetic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: shoot apex%2C root%2C seed%3B EXPRESSED DURING: E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347)%3B BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G19840.2)%3B Has 1138 Blast hits to 1132 proteins in 270 species: Archae - 0%3B Bacteria - 266%3B Metazoa - 428%3B Fungi - 156%3B Plants - 146%3B Viruses - 0%3B Other Eukaryotes - 142 (source: NCBI BLink).
AT3G47560
gene
9.91
3:17525476
alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: catalytic activity%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: BAAT/Acyl-CoA thioester hydrolase C-terminal (InterPro:IPR014940)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G29840.1)%3B Has 2811 Blast hits to 2808 proteins in 713 species: Archae - 69%3B Bacteria - 1437%3B Metazoa - 10%3B Fungi - 72%3B Plants - 197%3B Viruses - 0%3B Other Eukaryotes - 1026 (source: NCBI BLink).
AT3G50070
gene
CYCD3%3B3
9.80
3:18565134
Encode CYCD3%3B3%2C a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.
AT3G47450
gene
NOA1
9.79
3:17483068
Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis%2C mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins%2C including RBCL%2C ClpP1%2C and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase%2C but%2C the synthase activity was later disproven. In addition%2C new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts.
AT3G46630
gene
9.13
3:17180678
Protein of unknown function (DUF3223)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3223) (TAIR:AT1G45230.1)%3B Has 180 Blast hits to 180 proteins in 34 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 0%3B Fungi - 0%3B Plants - 159%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink).
AT5G35800
gene
9.01
5:13975327
transposable element gene [Source:TAIR;Acc:AT5G35800]
AT3G46560
gene
TIM9
8.97
3:17138476
Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Together with AtTIM10%2C AtTIM9 is non-redundantly essential for maintaining mitochondrial function of early embryo proper cells and endosperm free-nuclei.
AT3G46960
gene
8.71
3:17290873
The gene encodes a DExD%26#8260%3BH box RNA helicase%2C involved in the regulation of K+ deprivation stress response.
AT4G08040
gene
ACS11
8.62
4:04886962
encodes an aminotransferase that belongs to ACC synthase gene family structurally
AT3G45210
gene
8.31
3:16556684
Protein of unknown function%2C DUF584%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function%2C DUF584 (TAIR:AT5G60680.1)%3B Has 332 Blast hits to 332 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 332%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G47730
gene
ABCA2
8.27
3:17594060
member of ATH subfamily
AT3G49050
gene
8.12
3:18180907
alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: triglyceride lipase activity%2C calmodulin binding%3B INVOLVED IN: lipid catabolic process%2C lipid metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Lipase%2C class 3 (InterPro:IPR002921)%2C Mono-/di-acylglycerol lipase%2C N-terminal (InterPro:IPR005592)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G00500.2)%3B Has 551 Blast hits to 551 proteins in 136 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 153%3B Fungi - 88%3B Plants - 205%3B Viruses - 0%3B Other Eukaryotes - 99 (source: NCBI BLink).
AT3G44970
gene
7.84
3:16432286
Cytochrome P450 superfamily protein%3B FUNCTIONS IN: electron carrier activity%2C monooxygenase activity%2C iron ion binding%2C oxygen binding%2C heme binding%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: shoot apex%2C shoot%2C cotyledon%2C hypocotyl%2C leaf%3B CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128)%2C Cytochrome P450%2C E-class%2C group IV (InterPro:IPR002403)%2C Cytochrome P450%2C conserved site (InterPro:IPR017972)%3B BEST Arabidopsis thaliana protein match is: cytochrome P450%2C family 708%2C subfamily A%2C polypeptide 2 (TAIR:AT5G48000.5)%3B Has 31585 Blast hits to 31508 proteins in 1695 species: Archae - 52%3B Bacteria - 6275%3B Metazoa - 10768%3B Fungi - 5445%3B Plants - 7650%3B Viruses - 6%3B Other Eukaryotes - 1389 (source: NCBI BLink).
AT3G46040
gene
RPS15AD
7.78
3:16914525
Regulated by TCP20.
AT3G46770
gene
7.64
3:17223809
AP2/B3-like transcriptional factor family protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340)%3B BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2)%3B Has 157 Blast hits to 147 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 157%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G44990
gene
XTH31
7.52
3:16446935
Encodes a xyloglucan endotransglycosylase/hydrolase.
AT3G46150
gene
7.25
3:16949531
unknown protein%3B Has 1 Blast hits to 1 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G47380
gene
6.93
3:17457614
Plant invertase/pectin methylesterase inhibitor superfamily protein%3B FUNCTIONS IN: enzyme inhibitor activity%2C pectinesterase inhibitor activity%2C pectinesterase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501)%3B BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1)%3B Has 734 Blast hits to 730 proteins in 42 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 734%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G49930
gene
6.92
3:18510056
C2H2 and C2HC zinc fingers superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: zinc-finger protein 1 (TAIR:AT5G67450.1)%3B Has 7854 Blast hits to 5480 proteins in 142 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 6758%3B Fungi - 30%3B Plants - 847%3B Viruses - 0%3B Other Eukaryotes - 219 (source: NCBI BLink).
AT3G46940
gene
DUT1
6.85
3:17288134
DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1)%3B FUNCTIONS IN: hydrolase activity%2C dUTP diphosphatase activity%3B INVOLVED IN: DNA repair%2C 2'-deoxyribonucleotide metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain%2C subfamily 1%2C (InterPro:IPR008181)%2C DeoxyUTP pyrophosphatase domain (InterPro:IPR008180)%3B Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14%3B Bacteria - 4311%3B Metazoa - 248%3B Fungi - 161%3B Plants - 56%3B Viruses - 831%3B Other Eukaryotes - 2143 (source: NCBI BLink).
AT3G47490
gene
6.38
3:17498148
HNH endonuclease%3B FUNCTIONS IN: nucleic acid binding%2C endonuclease activity%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615)%2C HNH endonuclease (InterPro:IPR002711)%3B BEST Arabidopsis thaliana protein match is: HNH endonuclease domain-containing protein (TAIR:AT1G18680.1)%3B Has 116 Blast hits to 116 proteins in 31 species: Archae - 0%3B Bacteria - 23%3B Metazoa - 0%3B Fungi - 0%3B Plants - 76%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).
AT3G45770
gene
6.37
3:16805473
Polyketide synthase%2C enoylreductase family protein%3B FUNCTIONS IN: copper ion binding%2C zinc ion binding%2C ATP binding%3B INVOLVED IN: oxidation reduction%2C metabolic process%3B LOCATED IN: mitochondrion%2C chloroplast%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032)%2C Polyketide synthase%2C enoylreductase (InterPro:IPR020843)%2C NAD(P)-binding domain (InterPro:IPR016040)%2C Alcohol dehydrogenase GroES-like (InterPro:IPR013154)%2C Alcohol dehydrogenase%2C C-terminal (InterPro:IPR013149)%2C Alcohol dehydrogenase superfamily%2C zinc-containing (InterPro:IPR002085)%3B BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1)%3B Has 24073 Blast hits to 23997 proteins in 2260 species: Archae - 304%3B Bacteria - 15447%3B Metazoa - 1396%3B Fungi - 2050%3B Plants - 679%3B Viruses - 0%3B Other Eukaryotes - 4197 (source: NCBI BLink).
AT3G45750
gene
6.31
3:16793515
Nucleotidyltransferase family protein%3B BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1)%3B Has 1473 Blast hits to 1374 proteins in 212 species: Archae - 0%3B Bacteria - 1%3B Metazoa - 793%3B Fungi - 286%3B Plants - 167%3B Viruses - 0%3B Other Eukaryotes - 226 (source: NCBI BLink).
AT3G48700
gene
CXE13
6.21
3:18038648
carboxyesterase 13 (CXE13)%3B FUNCTIONS IN: hydrolase activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Lipase%2C GDXG%2C active site (InterPro:IPR002168)%2C Alpha/beta hydrolase fold-3 (InterPro:IPR013094)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48690.1)%3B Has 10327 Blast hits to 10297 proteins in 1570 species: Archae - 114%3B Bacteria - 5663%3B Metazoa - 1261%3B Fungi - 886%3B Plants - 1402%3B Viruses - 3%3B Other Eukaryotes - 998 (source: NCBI BLink).
AT3G46490
gene
6.20
3:17115483
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C 2-oxoglutarate as one donor%2C and incorporation of one atom each of oxygen into both donors%2C oxidoreductase activity%2C iron ion binding%3B INVOLVED IN: oxidation reduction%2C secondary metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283)%2C Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123)%3B BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G35190.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G48000
gene
ALDH2B4
6.18
3:17716864
Encodes a putative (NAD+) aldehyde dehydrogenase.
AT3G45230
gene
6.06
3:16569051
Encodes the arabinogalactan protein core of plant cell wall proteoglycan that contains arabinogalactan and cell wall matrix glycan pectin and/or xylan domains.
AT1G79410
gene
OCT5
5.85
1:29867854
organic cation/carnitine transporter5 (5-Oct)%3B FUNCTIONS IN: carbohydrate transmembrane transporter activity%2C sugar:hydrogen symporter activity%3B INVOLVED IN: transport%2C transmembrane transport%3B LOCATED IN: integral to membrane%2C membrane%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846)%2C General substrate transporter (InterPro:IPR005828)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 6 (TAIR:AT1G16370.1)%3B Has 11548 Blast hits to 11506 proteins in 1434 species: Archae - 261%3B Bacteria - 5062%3B Metazoa - 3508%3B Fungi - 1334%3B Plants - 912%3B Viruses - 0%3B Other Eukaryotes - 471 (source: NCBI BLink).
AT3G45680
gene
5.71
3:16770888
Major facilitator superfamily protein%3B FUNCTIONS IN: transporter activity%3B INVOLVED IN: oligopeptide transport%2C response to nematode%3B LOCATED IN: membrane%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter%2C conserved site (InterPro:IPR018456)%2C Oligopeptide transporter (InterPro:IPR000109)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1)%3B Has 3869 Blast hits to 3768 proteins in 536 species: Archae - 0%3B Bacteria - 851%3B Metazoa - 459%3B Fungi - 223%3B Plants - 2137%3B Viruses - 0%3B Other Eukaryotes - 199 (source: NCBI BLink).
AT3G45600
gene
TET3
5.70
3:16733755
Member of TETRASPANIN family
AT3G46000
gene
ADF2
5.43
3:16907334
Encodes depolymerizing factor 2.
AT3G45850
gene
5.36
3:16855500
P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: microtubule motor activity%2C ATP binding%3B INVOLVED IN: microtubule-based movement%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Kinesin%2C motor region%2C conserved site (InterPro:IPR019821)%2C Kinesin%2C motor domain (InterPro:IPR001752)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1)%3B Has 65646 Blast hits to 44270 proteins in 2280 species: Archae - 809%3B Bacteria - 9619%3B Metazoa - 29444%3B Fungi - 5953%3B Plants - 4409%3B Viruses - 140%3B Other Eukaryotes - 15272 (source: NCBI BLink).
AT3G49130
gene
5.29
3:18210453
SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: RNA processing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: stamen%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061)%3B BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT5G06520.1)%3B Has 267 Blast hits to 204 proteins in 63 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 67%3B Fungi - 8%3B Plants - 161%3B Viruses - 0%3B Other Eukaryotes - 31 (source: NCBI BLink).
AT3G46210
gene
5.28
3:16976631
Ribosomal protein S5 domain 2-like superfamily protein%3B FUNCTIONS IN: 3'-5'-exoribonuclease activity%2C RNA binding%3B INVOLVED IN: RNA processing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Exoribonuclease%2C phosphorolytic domain 1 (InterPro:IPR001247)%2C Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1)%3B Has 6526 Blast hits to 6524 proteins in 2015 species: Archae - 242%3B Bacteria - 4366%3B Metazoa - 314%3B Fungi - 210%3B Plants - 230%3B Viruses - 0%3B Other Eukaryotes - 1164 (source: NCBI BLink).
AT3G48930
gene
EMB1080
5.25
3:18140771
embryo defective 1080 (EMB1080)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C embryo development ending in seed dormancy%3B LOCATED IN: cytosolic small ribosomal subunit%2C cytosolic ribosome%2C cell wall%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Ribosomal protein S17%2C archaeal (InterPro:IPR019978)%2C Ribosomal protein S17%2C conserved site (InterPro:IPR019979)%2C Ribosomal protein S17 (InterPro:IPR000266)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein S11-beta (TAIR:AT5G23740.1)%3B Has 1290 Blast hits to 1288 proteins in 469 species: Archae - 240%3B Bacteria - 242%3B Metazoa - 305%3B Fungi - 148%3B Plants - 140%3B Viruses - 0%3B Other Eukaryotes - 215 (source: NCBI BLink).
AT3G49900
gene
5.21
3:18500575
Phototropic-responsive NPH3 family protein%3B FUNCTIONS IN: signal transducer activity%3B INVOLVED IN: response to light stimulus%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249)%2C BTB/POZ fold (InterPro:IPR011333)%2C BTB/POZ-like (InterPro:IPR000210)%3B BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G13600.1)%3B Has 1290 Blast hits to 750 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 0%3B Plants - 1280%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink).
AT1G23210
gene
GH9B6
5.17
1:08240145
glycosyl hydrolase 9B6 (GH9B6)%3B FUNCTIONS IN: hydrolase activity%2C hydrolyzing O-glycosyl compounds%2C catalytic activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341)%2C Glycoside hydrolase%2C family 9%2C active site (InterPro:IPR018221)%2C Six-hairpin glycosidase-like (InterPro:IPR008928)%2C Glycoside hydrolase%2C family 9 (InterPro:IPR001701)%3B BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B1 (TAIR:AT1G70710.1)%3B Has 1742 Blast hits to 1728 proteins in 256 species: Archae - 2%3B Bacteria - 580%3B Metazoa - 187%3B Fungi - 17%3B Plants - 918%3B Viruses - 0%3B Other Eukaryotes - 38 (source: NCBI BLink).
AT3G49000
gene
5.11
3:18162560
RNA polymerase III subunit RPC82 family protein%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C DNA binding%3B INVOLVED IN: transcription%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA polymerase III subunit RPC82-related%2C helix-turn-helix (InterPro:IPR013197)%2C RNA polymerase III Rpc82%2C C -terminal (InterPro:IPR008806)%3B Has 265 Blast hits to 257 proteins in 119 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 106%3B Fungi - 69%3B Plants - 57%3B Viruses - 0%3B Other Eukaryotes - 31 (source: NCBI BLink).
AT3G29200
gene
CM1
5.09
3:11163839
L-ascorbate peroxidase
AT3G47460
gene
ATSMC2
5.07
3:17486490
member of SMC subfamily
AT3G49670
gene
BAM2
5.06
3:18417568
Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1%2Cwith more than 85%25 a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf%2C control of leaf shape%2C size and symmetry%2C male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium%2C middle%2C and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs)%2C suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis%2C suggesting that these cells are defective. In addition%2C the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.
AT3G48040
gene
ROP10
4.94
3:17731337
Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling.
AT3G48850
gene
PHT3%3B2
4.77
3:18114526
Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress.
AT3G44690
gene
4.77
3:16230685
unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G18430
gene
4.68
5:06110151
GDSL-like Lipase/Acylhydrolase superfamily protein%3B FUNCTIONS IN: hydrolase activity%2C acting on ester bonds%2C carboxylesterase activity%3B INVOLVED IN: lipid metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Lipase%2C GDSL (InterPro:IPR001087)%3B BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1)%3B Has 3282 Blast hits to 3244 proteins in 154 species: Archae - 0%3B Bacteria - 202%3B Metazoa - 0%3B Fungi - 2%3B Plants - 3065%3B Viruses - 0%3B Other Eukaryotes - 13 (source: NCBI BLink).
AT1G02850
gene
BGLU11
4.58
1:00630374
beta glucosidase 11 (BGLU11)%3B FUNCTIONS IN: cation binding%2C hydrolase activity%2C hydrolyzing O-glycosyl compounds%2C catalytic activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C family 1 (InterPro:IPR001360)%2C Glycoside hydrolase%2C family 1%2C active site (InterPro:IPR018120)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%3B BEST Arabidopsis thaliana protein match is: beta glucosidase 2 (TAIR:AT4G22100.1)%3B Has 11304 Blast hits to 10989 proteins in 1473 species: Archae - 140%3B Bacteria - 7804%3B Metazoa - 711%3B Fungi - 201%3B Plants - 1455%3B Viruses - 0%3B Other Eukaryotes - 993 (source: NCBI BLink).
AT3G47600
gene
MYB94
4.52
3:17539289
Encodes a putative transcription factor (MYB94).
AT3G46900
gene
COPT2
4.50
3:17268700
encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast
AT1G17800
gene
ENODL22
4.35
1:06128823
early nodulin-like protein 22 (ENODL22)%3B FUNCTIONS IN: electron carrier activity%2C copper ion binding%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: 4 anthesis%2C LP.02 two leaves visible%2C 4 leaf senescence stage%2C LP.12 twelve leaves visible%3B CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245)%2C Cupredoxin (InterPro:IPR008972)%3B BEST Arabidopsis thaliana protein match is: plantacyanin (TAIR:AT2G02850.1)%3B Has 1120 Blast hits to 1103 proteins in 53 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1120%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT2G43290
gene
MSS3
4.34
2:17991052
Encodes calmodulin-like MSS3.
AT3G45630
gene
4.28
3:16748092
RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C zinc ion binding%2C nucleotide binding%2C nucleic acid binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1)%3B Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0%3B Bacteria - 612%3B Metazoa - 421%3B Fungi - 369%3B Plants - 161%3B Viruses - 3%3B Other Eukaryotes - 675 (source: NCBI BLink).
AT3G48140
gene
4.21
3:17778282
B12D protein%3B CONTAINS InterPro DOMAIN/s: B12D (InterPro:IPR010530)%3B BEST Arabidopsis thaliana protein match is: B12D protein (TAIR:AT3G29970.1)%3B Has 143 Blast hits to 143 proteins in 25 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 143%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G34250
gene
KCS16
4.17
4:16394600
Encodes KCS16%2C a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
AT2G35715
4.10
0:00000000
AT4G22700
gene
LBD32
4.09
4:11933297
LOB domain-containing protein 32 (LBD32)%3B CONTAINS InterPro DOMAIN/s: Lateral organ boundaries%2C LOB (InterPro:IPR004883)%3B BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 35 (TAIR:AT5G35900.1)%3B Has 784 Blast hits to 780 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 784%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G45620
gene
4.01
3:16745873
This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays%2C and DDB1b in co-IP assays%2C and may be involved in the formation of a CUL4-based E3 ubiquitin ligase
AT5G33390
gene
4.01
5:12661708
glycine-rich protein%3B BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT1G36675.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G48070
gene
3.92
3:17750710
RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G62910.1)%3B Has 516 Blast hits to 512 proteins in 181 species: Archae - 0%3B Bacteria - 1%3B Metazoa - 163%3B Fungi - 134%3B Plants - 150%3B Viruses - 0%3B Other Eukaryotes - 68 (source: NCBI BLink).
AT3G49580
gene
LSU1
3.90
3:18374908
RESPONSE TO LOW SULFUR 1 (LSU1)%3B BEST Arabidopsis thaliana protein match is: response to low sulfur 3 (TAIR:AT3G49570.1)%3B Has 73 Blast hits to 73 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 70%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).
AT5G41810
gene
3.87
5:16738062
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1)%3B Has 876 Blast hits to 690 proteins in 132 species: Archae - 0%3B Bacteria - 38%3B Metazoa - 180%3B Fungi - 112%3B Plants - 59%3B Viruses - 2%3B Other Eukaryotes - 485 (source: NCBI BLink).
AT3G53160
gene
UGT73C7
3.87
3:19702332
UDP-glucosyl transferase 73C7 (UGT73C7)%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1)%3B Has 7083 Blast hits to 7007 proteins in 427 species: Archae - 0%3B Bacteria - 435%3B Metazoa - 1539%3B Fungi - 21%3B Plants - 4999%3B Viruses - 33%3B Other Eukaryotes - 56 (source: NCBI BLink).
AT5G62160
gene
ZIP12
3.84
5:24960107
member of Fe(II) transporter isolog family
AT1G71870
gene
3.78
1:27032221
MATE efflux family protein%3B FUNCTIONS IN: antiporter activity%2C drug transmembrane transporter activity%2C transporter activity%3B INVOLVED IN: drug transmembrane transport%2C transmembrane transport%3B LOCATED IN: membrane%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528)%3B BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1)%3B Has 10234 Blast hits to 10086 proteins in 1918 species: Archae - 185%3B Bacteria - 7350%3B Metazoa - 148%3B Fungi - 328%3B Plants - 1302%3B Viruses - 0%3B Other Eukaryotes - 921 (source: NCBI BLink).
AT1G78340
gene
GSTU22
3.77
1:29472845
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
AT2G21650
gene
MEE3
3.75
2:09259511
RSM1 is a member of a small sub-family of single MYB transcription factors. Analysis of overexpressin lines indicate its involvement during early morphogenesis.
AT3G43920
gene
DCL3
3.74
3:15753387
Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.
AT2G20620
gene
3.70
2:08891920
Protein of unknown function (DUF626)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626%2C Arabidopsis thaliana (InterPro:IPR006462)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT4G29550.1)%3B Has 165 Blast hits to 165 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 165%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G01680
gene
MYB55
3.67
4:00715970
Encodes a putative transcription factor (MYB55).
AT3G48020
gene
3.65
3:17724400
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1)%3B Has 82 Blast hits to 82 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 82%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G47890
gene
3.58
5:19388704
NADH-ubiquinone oxidoreductase B8 subunit%2C putative%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741)%2C NADH dehydrogenase [ubiquinone] (complex I)%2C alpha subcomplex%2C subunit 2 (InterPro:IPR016464)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT3G50850
gene
3.52
3:18901342
Putative methyltransferase family protein%3B CONTAINS InterPro DOMAIN/s: Methyltransferase-16%2C putative (InterPro:IPR019410)%3B BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G49560.1)%3B Has 1235 Blast hits to 1235 proteins in 193 species: Archae - 0%3B Bacteria - 22%3B Metazoa - 380%3B Fungi - 406%3B Plants - 294%3B Viruses - 0%3B Other Eukaryotes - 133 (source: NCBI BLink).
AT1G61580
gene
RPL3B
3.48
1:22720560
R-protein L3 B (RPL3B)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597)%2C Ribosomal protein L3%2C conserved site (InterPro:IPR019926)%2C Translation elongation/initiation factor/Ribosomal%2C beta-barrel (InterPro:IPR009000)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8)%3B Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329%3B Bacteria - 1185%3B Metazoa - 455%3B Fungi - 168%3B Plants - 207%3B Viruses - 1%3B Other Eukaryotes - 429 (source: NCBI BLink).
AT3G50120
gene
3.38
3:18585000
Plant protein of unknown function (DUF247)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: leaf apex%2C petal%2C leaf whorl%2C sepal%2C flower%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247%2C plant (InterPro:IPR004158)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1)%3B Has 1189 Blast hits to 1046 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1189%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G13672
gene
3.35
3:04472562
TRAF-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: multicellular organismal development%2C ubiquitin-dependent protein catabolic process%3B LOCATED IN: nucleus%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C Seven-in-absentia protein%2C TRAF-like domain (InterPro:IPR018121)%2C Seven-in-absentia protein%2C sina (InterPro:IPR004162)%2C TRAF-type (InterPro:IPR013322)%3B BEST Arabidopsis thaliana protein match is: seven in absentia of Arabidopsis 2 (TAIR:AT3G58040.1)%3B Has 478 Blast hits to 478 proteins in 76 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 245%3B Fungi - 0%3B Plants - 224%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT3G44260
gene
CAF1a
3.31
3:15952008
Encodes one of the homologs of the yeast CCR4-associated factor 1: AT3G44260 (CAF1a)%2C AT5G22250 (CAF1b). Has mRNA deadenylation activity. Also plays a role in plant defense responses.
AT1G60060
gene
3.30
1:22139170
Serine/threonine-protein kinase WNK (With No Lysine)-related%3B BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT5G53900.2)%3B Has 3565 Blast hits to 2565 proteins in 80 species: Archae - 0%3B Bacteria - 3%3B Metazoa - 15%3B Fungi - 88%3B Plants - 227%3B Viruses - 0%3B Other Eukaryotes - 3232 (source: NCBI BLink).
AT1G57943
gene
PUP17
3.26
1:21437501
Member of a family of proteins related to PUP1%2C a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins%2C across the plasma membrane.
AT3G45120
gene
3.20
3:00000000
transposable element gene [Source:TAIR;Acc:AT3G45120]
AT3G44540
gene
FAR4
3.16
3:16123426
Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs%2C FAR1 (At5g22500)%2C FAR4 (At3g44540) and FAR5 (At3g44550)%2C are shown to generate the fatty alcohols found in root%2C seed coat%2C and wound-induced leaf tissue.
AT4G01950
gene
GPAT3
3.14
4:00844342
putative sn-glycerol-3-phosphate 2-O-acyltransferase
AT5G15240
gene
3.11
5:04947577
Transmembrane amino acid transporter family protein%3B CONTAINS InterPro DOMAIN/s: Amino acid transporter%2C transmembrane (InterPro:IPR013057)%3B BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1)%3B Has 5045 Blast hits to 4985 proteins in 317 species: Archae - 15%3B Bacteria - 153%3B Metazoa - 1796%3B Fungi - 1055%3B Plants - 1275%3B Viruses - 9%3B Other Eukaryotes - 742 (source: NCBI BLink).
AT5G67520
gene
APK4
3.08
5:26939159
Provides activated sulfate for the sulfation of secondary metabolites%2C including the glucosinolates. Redundant with APK3.
AT3G46130
gene
MYB48
3.07
3:16945230
Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.
AT3G46610
gene
3.06
3:17159763
Pentatricopeptide repeat (PPR-like) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G14350.1)%3B Has 35826 Blast hits to 11282 proteins in 257 species: Archae - 3%3B Bacteria - 23%3B Metazoa - 290%3B Fungi - 374%3B Plants - 33823%3B Viruses - 0%3B Other Eukaryotes - 1313 (source: NCBI BLink).
AT2G39870
gene
3.06
2:16643381
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55690.1)%3B Has 73 Blast hits to 71 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 2%3B Plants - 69%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G24950
gene
CYP71A15
3.03
5:08595209
putative cytochrome P450
