AT5G16970
gene
AER
64.90
5:05575973
encodes a 2-alkenal reductase (EC 1.3.1.74)%2C plays a key role in the detoxification of reactive carbonyls
AT5G15980
gene
60.06
5:05213062
Pentatricopeptide repeat (PPR) superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G02490.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G17100
gene
58.28
5:05623021
Cystatin/monellin superfamily protein%3B CONTAINS InterPro DOMAIN/s: Cystatin-related%2C plant (InterPro:IPR006525)%3B BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT5G17110.1)%3B Has 96 Blast hits to 86 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 96%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G11580
gene
44.12
5:03718804
Regulator of chromosome condensation (RCC1) family protein%3B CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091)%2C Regulator of chromosome condensation%2C RCC1 (InterPro:IPR000408)%3B BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G14570
gene
NRT2.7
41.99
5:04695084
Encodes ATNRT2.7%2C a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.
AT5G12930
gene
33.09
5:04082890
unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G15230
gene
GASA4
27.83
5:04944816
Encodes gibberellin-regulated protein GASA4. Promotes GA responses and exhibits redox activity.
AT5G17210
gene
27.72
5:05656348
Protein of unknown function (DUF1218)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G61065.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G14240
gene
27.08
5:04595928
Thioredoxin superfamily protein%3B CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335)%2C Thioredoxin-like fold (InterPro:IPR012336)%3B Has 1075 Blast hits to 1075 proteins in 388 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 646%3B Fungi - 206%3B Plants - 103%3B Viruses - 0%3B Other Eukaryotes - 118 (source: NCBI BLink).
AT5G14330
gene
26.14
5:04619727
unknown protein%3B Has 8 Blast hits to 8 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 8%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G16050
gene
GRF5
25.23
5:05243555
Encodes GF14 upsilon chain%2C a 14-3-3 gene family member.
AT5G13740
gene
ZIF1
23.75
5:04432297
Encodes ZIF1 (ZINC-INDUCED FACILITATOR1)%2C a member of the Major Facilitator Superfamily (MFS) of membrane proteins which are found in all organisms and transport a wide range of small%2C organic molecules. Involved in a mechanism of Zn sequestration%2C possibly by transport of a Zn ligand or Zn-ligand complex into vacuoles.
AT5G16990
gene
23.18
5:05581524
molecular function has not been defined%2C was shown involved in oxidative stress tolerance.
AT5G16960
gene
23.04
5:05573700
Zinc-binding dehydrogenase family protein%3B FUNCTIONS IN: oxidoreductase activity%2C binding%2C zinc ion binding%2C catalytic activity%3B INVOLVED IN: response to oxidative stress%3B EXPRESSED IN: leaf whorl%2C sepal%2C flower%2C stamen%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032)%2C NAD(P)-binding domain (InterPro:IPR016040)%2C Alcohol dehydrogenase%2C C-terminal (InterPro:IPR013149)%2C Alcohol dehydrogenase superfamily%2C zinc-containing (InterPro:IPR002085)%3B BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G11700
gene
23.00
5:03762391
LOCATED IN: vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G16220
gene
21.47
5:05298112
Octicosapeptide/Phox/Bem1p family protein%3B CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270)%3B BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT2G01190.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G16570
gene
GLN1%3B4
20.77
5:05421589
Encodes a cytosolic glutamine synthetase%2C the enzyme has high affinity with substrate ammonium
AT5G16380
gene
20.00
5:05359307
Protein of unknown function%2C DUF538%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function%2C DUF538 (TAIR:AT3G07470.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G11610
gene
19.57
5:03735350
Exostosin family protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%2C membrane%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C LP.10 ten leaves visible%2C 4 leaf senescence stage%3B CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263)%3B BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G25820.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G14380
gene
AGP6
19.15
5:04635644
Encodes an arabinogalactan protein that is expressed in pollen%2C pollen sac and pollen tube. Loss of AGP6 function results in decreased fertility due to defects in pollen tube growth.
AT5G12880
gene
18.95
5:04068426
proline-rich family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C LP.10 ten leaves visible%2C petal differentiation and expansion stage%2C LP.08 eight leaves visible%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G17360
gene
18.06
5:05720283
BEST Arabidopsis thaliana protein match is: DNA LIGASE 6 (TAIR:AT1G66730.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G15610
gene
17.65
5:05079458
Proteasome component (PCI) domain protein%3B CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717)%3B BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT3G02200.2)%3B Has 426 Blast hits to 426 proteins in 186 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 183%3B Fungi - 114%3B Plants - 66%3B Viruses - 0%3B Other Eukaryotes - 63 (source: NCBI BLink).
AT5G16250
gene
17.21
5:05310052
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G16230
gene
16.61
5:05302905
Plant stearoyl-acyl-carrier-protein desaturase family protein%3B FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity%2C oxidoreductase activity%2C transition metal ion binding%3B INVOLVED IN: oxidation reduction%2C fatty acid metabolic process%2C fatty acid biosynthetic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: M germinated pollen stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348)%2C Ferritin/ribonucleotide reductase-like (InterPro:IPR009078)%2C Fatty acid desaturase%2C type 2 (InterPro:IPR005067)%3B BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02610.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G09470
gene
DIC3
15.45
5:02949132
Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500)%2C DIC2 (AT4G24570)%2C DIC3 (AT5G09470).
AT5G16200
gene
15.32
5:05289401
50S ribosomal protein-related%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G16320
gene
FRL1
14.73
5:05344495
family member of FRI-related genes that is required for the winter-annual habit. Genbank accession BK004884
AT5G13360
gene
14.04
5:04283356
Auxin-responsive GH3 family protein%3B CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993)%3B BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT5G13370.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G12040
gene
13.90
5:03884949
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein%3B FUNCTIONS IN: hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C zinc ion binding%3B INVOLVED IN: nitrogen compound metabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010)%3B BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G17780
gene
13.30
5:05867169
alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: hydrolase activity%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1)%3B Has 7857 Blast hits to 7854 proteins in 1332 species: Archae - 48%3B Bacteria - 4836%3B Metazoa - 288%3B Fungi - 267%3B Plants - 239%3B Viruses - 3%3B Other Eukaryotes - 2176 (source: NCBI BLink).
AT5G13110
gene
G6PD2
13.24
5:04158639
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.
AT5G15050
gene
13.06
5:04871531
Encodes GlcAT14B. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1%2C3- and beta-1%2C6-linked galactans.
AT5G15330
gene
SPX4
12.30
5:04980374
SPX domain gene 4 (SPX4)%3B CONTAINS InterPro DOMAIN/s: SPX%2C N-terminal (InterPro:IPR004331)%3B BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G14180
gene
MPL1
11.99
5:04571294
Myzus persicae-induced lipase 1 (MPL1)%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: glycerol biosynthetic process%2C lipid metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693)%2C Alpha/beta hydrolase fold-1 (InterPro:IPR000073)%3B BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1)%3B Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0%3B Bacteria - 109%3B Metazoa - 1225%3B Fungi - 283%3B Plants - 181%3B Viruses - 0%3B Other Eukaryotes - 113 (source: NCBI BLink).
AT5G16910
gene
CSLD2
11.90
5:05560607
encodes a gene similar to cellulose synthase. Located in Golgi membranes.
AT5G14620
gene
DRM2
11.79
5:04715105
A putative DNA methyltransferase with rearranged catalytic domains%3B similar to mammalian DNMT3 methyltransferases%3B contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.
AT5G15520
gene
11.41
5:05037021
Ribosomal protein S19e family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C ribosome%2C nucleolus%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e%2C conserved site (InterPro:IPR018277)%2C Ribosomal protein S19e (InterPro:IPR001266)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT3G02080.1)%3B Has 1130 Blast hits to 1130 proteins in 395 species: Archae - 215%3B Bacteria - 1%3B Metazoa - 402%3B Fungi - 149%3B Plants - 164%3B Viruses - 0%3B Other Eukaryotes - 199 (source: NCBI BLink).
AT5G16040
gene
11.37
5:05240675
Regulator of chromosome condensation (RCC1) family protein%3B FUNCTIONS IN: chromatin binding%2C Ran GTPase binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091)%2C Regulator of chromosome condensation%2C RCC1 (InterPro:IPR000408)%3B BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G02510.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G17000
gene
10.93
5:05584708
Zinc-binding dehydrogenase family protein%3B FUNCTIONS IN: oxidoreductase activity%2C binding%2C catalytic activity%2C zinc ion binding%3B INVOLVED IN: response to oxidative stress%3B EXPRESSED IN: cultured cell%2C leaf%3B CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032)%2C NAD(P)-binding domain (InterPro:IPR016040)%2C Alcohol dehydrogenase%2C C-terminal (InterPro:IPR013149)%2C Alcohol dehydrogenase superfamily%2C zinc-containing (InterPro:IPR002085)%3B BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G13490
gene
AAC2
10.77
5:04335272
Encodes mitochondrial ADP/ATP carrier
AT5G13550
gene
SULTR4%3B1
10.59
5:04355276
Encodes a sulfate transporter.
AT5G15210
gene
HB30
10.48
5:04937465
Encodes ZFHD3%2C a member of the zinc finger homeodomain transcriptional factor family.
AT5G17040
gene
10.26
5:05605201
UDP-Glycosyltransferase superfamily protein%3B FUNCTIONS IN: UDP-glycosyltransferase activity%2C transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: metabolic process%3B CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213)%3B BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1)%3B Has 8109 Blast hits to 8057 proteins in 479 species: Archae - 2%3B Bacteria - 528%3B Metazoa - 2521%3B Fungi - 38%3B Plants - 4841%3B Viruses - 115%3B Other Eukaryotes - 64 (source: NCBI BLink).
AT5G23320
gene
STE14A
10.22
5:07852585
Encodes a prenylcysteine alpha-carboxyl methyltransferase involved in methylation of isoprenylated proteins. This protein appears to have lower catalytic activity and a lower transcript expression level than the other ICMT present in Arabidopsis (At5g08335). Analysis of ICMT RNAi lines suggests that this protein may be involved in flower and stem development.
AT5G17570
gene
10.12
5:05792926
TatD related DNase%3B FUNCTIONS IN: endodeoxyribonuclease activity%2C producing 5'-phosphomonoesters%2C deoxyribonuclease activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Deoxyribonuclease%2C TatD Mg-dependent (InterPro:IPR012278)%2C Deoxyribonuclease%2C TatD (InterPro:IPR015992)%2C Deoxyribonuclease%2C TatD-related (InterPro:IPR001130)%3B BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT3G03500.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G17290
gene
APG5
10.11
5:05686135
Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation%2C accompanied by a more rapid loss of organellar and cytoplasmic proteins.
AT5G16620
gene
TIC40
10.03
5:05450620
chloroplast protein import (Tic40)
AT5G15320
gene
9.91
5:04977470
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1)%3B Has 64 Blast hits to 64 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 64%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G13120
gene
Pnsl5
9.80
5:04162374
Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.
AT5G17020
gene
XPO1A
9.78
5:05594632
Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.
AT5G15850
gene
COL1
9.39
5:05176091
Homologous to the flowering-time gene CONSTANS.
AT5G14100
gene
ABCI11
9.34
5:04549438
member of NAP subfamily
AT5G15080
gene
9.23
5:04886029
Protein kinase superfamily protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%2C N-terminal protein myristoylation%3B LOCATED IN: plasma membrane%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1)%3B Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103%3B Bacteria - 13473%3B Metazoa - 41986%3B Fungi - 9512%3B Plants - 32487%3B Viruses - 375%3B Other Eukaryotes - 16540 (source: NCBI BLink).
AT5G15950
gene
9.21
5:05205869
Adenosylmethionine decarboxylase family protein%3B FUNCTIONS IN: adenosylmethionine decarboxylase activity%3B INVOLVED IN: spermidine biosynthetic process%2C spermine biosynthetic process%2C polyamine biosynthetic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase%2C core (InterPro:IPR016067)%2C S-adenosylmethionine decarboxylase (InterPro:IPR001985)%2C S-adenosylmethionine decarboxylase%2C conserved site (InterPro:IPR018166)%2C S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167)%3B BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G13890
gene
9.12
5:04478787
Family of unknown function (DUF716) %3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32120.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G10830
gene
9.03
5:03423381
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein%3B FUNCTIONS IN: methyltransferase activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216)%3B BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G22530.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G16190
gene
CSLA11
8.99
5:05283447
encodes a gene similar to cellulose synthase
AT5G16480
gene
PFA-DSP5
8.96
5:05381069
Encodes an atypical dual-speci%26#64257%3Bcity phosphatase.
AT5G13140
gene
8.91
5:04170560
Pollen Ole e 1 allergen and extensin family protein%3B CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041)%3B BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G26960.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT2G45660
gene
AGL20
8.82
2:18807505
Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.
AT5G15930
gene
PAM1
8.74
5:05199711
Encodes a putative plant adhesion molecule.
AT5G62165
gene
AGL42
8.70
5:24964646
Encodes a MADS box transcription factor. Expressed in quiescent center. Involved in floral transition.
AT5G11150
gene
VAMP713
8.69
5:03546200
Member of Synaptobrevin-like AtVAMP7C%2C v-SNARE protein family.
AT5G16940
gene
8.47
5:05571550
carbon-sulfur lyases%3B FUNCTIONS IN: carbon-sulfur lyase activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glutathione-dependent formaldehyde-activating%2C GFA (InterPro:IPR006913)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G17010
gene
8.41
5:05587344
Major facilitator superfamily protein%3B FUNCTIONS IN: carbohydrate transmembrane transporter activity%2C sugar:hydrogen symporter activity%3B INVOLVED IN: transport%2C transmembrane transport%3B LOCATED IN: plasma membrane%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Sugar transporter%2C conserved site (InterPro:IPR005829)%2C Major facilitator superfamily (InterPro:IPR020846)%2C Sugar/inositol transporter (InterPro:IPR003663)%2C General substrate transporter (InterPro:IPR005828)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: vacuolar glucose transporter 1 (TAIR:AT3G03090.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT5G12100
gene
8.26
5:03911334
pentatricopeptide (PPR) repeat-containing protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G16950
gene
8.23
5:05572523
unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G13710
gene
SMT1
7.76
5:04423555
SMT1 controls the level of cholesterol in plants
AT5G15910
gene
7.64
5:05192842
NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: coenzyme binding%2C binding%2C catalytic activity%3B INVOLVED IN: cellular metabolic process%2C metabolic process%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509)%2C NAD(P)-binding domain (InterPro:IPR016040)%3B BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10730.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G15300
gene
7.58
5:04968089
Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1)%3B Has 37071 Blast hits to 13818 proteins in 252 species: Archae - 0%3B Bacteria - 21%3B Metazoa - 136%3B Fungi - 146%3B Plants - 36104%3B Viruses - 0%3B Other Eukaryotes - 664 (source: NCBI BLink).
AT5G13680
gene
ABO1
7.43
5:04410314
A subunit of Elongator%2C a histone acetyl transferase complex%2C consisting of six subunits (ELP1%E2%80%93ELP6)%2C that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes%2C encoding homologs of the yeast Elongator subunits ELP1%2C ELP3 (histone acetyl transferase)%2C and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Mutants have no ncm5U (5-carbamoylmethyluridine).
AT5G16340
gene
7.34
5:05348993
AMP-dependent synthetase and ligase family protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: metabolic process%3B CONTAINS InterPro DOMAIN/s: AMP-binding%2C conserved site (InterPro:IPR020845)%2C AMP-dependent synthetase/ligase (InterPro:IPR000873)%3B BEST Arabidopsis thaliana protein match is: acyl activating enzyme 5 (TAIR:AT5G16370.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G14920
gene
7.03
5:04826141
Encodes a GASA domain containing protein that regulates increases in plant growth through GA-induced and DELLA-dependent signal transduction and that can increase abiotic stress resistance by reducing ROS accumulation.
AT2G39330
gene
JAL23
6.94
2:16419483
jacalin-related lectin 23 (JAL23)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229)%3B BEST Arabidopsis thaliana protein match is: jacalin-related lectin 22 (TAIR:AT2G39310.3)%3B Has 1977 Blast hits to 736 proteins in 44 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 0%3B Fungi - 4%3B Plants - 1953%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT5G14640
gene
SK13
6.86
5:04718994
shaggy-like kinase 13 (SK13)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C ATP binding%3B INVOLVED IN: response to salt stress%2C hyperosmotic response%3B LOCATED IN: cytosol%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G10610
gene
CYP81K1
6.76
5:03353442
member of CYP81K
AT5G14070
gene
ROXY2
6.68
5:04541780
Encodes glutaredoxin ROXY2. ROXY2%2C together with ROXY1 (AT3G02000)%2C controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.
AT5G24030
gene
SLAH3
6.66
5:08118317
Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells%2C it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.
AT5G12140
gene
CYS1
6.62
5:03922591
Encodes a cystatin.
AT5G12130
gene
PDE149
6.28
5:03919428
PIGMENT DEFECTIVE 149 (PDE149)%3B CONTAINS InterPro DOMAIN/s: Integral membrane protein TerC (InterPro:IPR005496)%2C Integral membrane protein TerC%2C riboswitch-linked (InterPro:IPR022369)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G12160
gene
None
6.21
None:
None
AT5G18680
gene
TLP11
6.17
5:06228163
Member of TLP family
AT5G15390
gene
6.16
5:04995138
tRNA/rRNA methyltransferase (SpoU) family protein%3B FUNCTIONS IN: RNA binding%2C RNA methyltransferase activity%3B INVOLVED IN: RNA processing%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase%2C SpoU (InterPro:IPR001537)%3B Has 11780 Blast hits to 11778 proteins in 2508 species: Archae - 10%3B Bacteria - 9274%3B Metazoa - 151%3B Fungi - 61%3B Plants - 151%3B Viruses - 0%3B Other Eukaryotes - 2133 (source: NCBI BLink).
AT5G14760
gene
AO
6.14
5:04768263
At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 %3D iminoaspartate (alpha-iminosuccinate) + H2O2
AT5G13750
gene
ZIFL1
6.10
5:04437804
zinc induced facilitator-like 1 (ZIFL1)%3B FUNCTIONS IN: tetracycline:hydrogen antiporter activity%3B INVOLVED IN: response to karrikin%3B LOCATED IN: integral to membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846)%2C Tetracycline resistance protein%2C TetA (InterPro:IPR001958)%2C Major facilitator superfamily MFS-1 (InterPro:IPR011701)%2C Major facilitator superfamily%2C general substrate transporter (InterPro:IPR016196)%3B BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1)%3B Has 19294 Blast hits to 18859 proteins in 2587 species: Archae - 361%3B Bacteria - 14367%3B Metazoa - 620%3B Fungi - 2172%3B Plants - 389%3B Viruses - 0%3B Other Eukaryotes - 1385 (source: NCBI BLink).
AT5G14630
5.82
0:00000000
AT4G08580
gene
5.67
4:05461398
microfibrillar-associated protein-related%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Micro-fibrillar-associated 1%2C C-terminal (InterPro:IPR009730)%3B BEST Arabidopsis thaliana protein match is: microfibrillar-associated protein-related (TAIR:AT5G17900.1)%3B Has 41823 Blast hits to 26074 proteins in 1611 species: Archae - 271%3B Bacteria - 4310%3B Metazoa - 18112%3B Fungi - 3731%3B Plants - 1727%3B Viruses - 240%3B Other Eukaryotes - 13432 (source: NCBI BLink).
AT5G11200
gene
UAP56b
5.62
5:03567174
One of two genes encoding an ATP-dependent RNA helicase that localizes predominantly to euchromatic regions of Arabidopsis nuclei%2C and associates with genes transcribed by RNA polymerase II independently from the presence of introns. It is not detected at non-transcribed loci. It interacts with ssRNA%2C dsRNA and dsDNA%2C but not with ssDNA. Its ATPase activity is stimulated by RNA and dsDNA and its ATP-dependent RNA helicase activity unwinds dsRNA but not dsDNA.
AT5G07890
gene
5.61
5:02517306
myosin heavy chain-related%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61200.3)%3B Has 43004 Blast hits to 25312 proteins in 1567 species: Archae - 608%3B Bacteria - 4434%3B Metazoa - 22456%3B Fungi - 2945%3B Plants - 1841%3B Viruses - 100%3B Other Eukaryotes - 10620 (source: NCBI BLink).
AT5G17300
gene
RVE1
5.60
5:05690225
Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.
AT5G18390
gene
5.57
5:06090891
Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65820.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G23750
gene
CRF2
5.42
4:12376122
encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.
AT5G12370
gene
SEC10
5.40
5:04002742
exocyst complex component sec10 (SEC10)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: exocytosis%2C vesicle docking%3B LOCATED IN: plasma membrane%2C membrane%2C exocyst%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976)%3B Has 527 Blast hits to 483 proteins in 172 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 178%3B Fungi - 247%3B Plants - 59%3B Viruses - 0%3B Other Eukaryotes - 37 (source: NCBI BLink).
AT5G16060
gene
5.34
5:05246080
Cytochrome c oxidase biogenesis protein Cmc1-like%3B CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase biogenesis protein Cmc1-like (InterPro:IPR013892)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G13290
gene
CRN
5.33
5:04252842
Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19%2C a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels.
AT4G29020
gene
5.17
4:14304921
glycine-rich protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 92355 Blast hits to 23750 proteins in 1587 species: Archae - 185%3B Bacteria - 38167%3B Metazoa - 25977%3B Fungi - 4591%3B Plants - 7302%3B Viruses - 1155%3B Other Eukaryotes - 14978 (source: NCBI BLink).
AT5G15240
gene
5.11
5:04947577
Transmembrane amino acid transporter family protein%3B CONTAINS InterPro DOMAIN/s: Amino acid transporter%2C transmembrane (InterPro:IPR013057)%3B BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1)%3B Has 5045 Blast hits to 4985 proteins in 317 species: Archae - 15%3B Bacteria - 153%3B Metazoa - 1796%3B Fungi - 1055%3B Plants - 1275%3B Viruses - 9%3B Other Eukaryotes - 742 (source: NCBI BLink).
AT3G47380
gene
5.07
3:17457614
Plant invertase/pectin methylesterase inhibitor superfamily protein%3B FUNCTIONS IN: enzyme inhibitor activity%2C pectinesterase inhibitor activity%2C pectinesterase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501)%3B BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1)%3B Has 734 Blast hits to 730 proteins in 42 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 734%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G28280
gene
5.02
5:10261017
pseudogene, sterol desaturase domain-containing protein, CER1-like, A.thaliana, ATCER1L19; blastp match of 55% identity and 8.9e-22 P-value to GP [Source:TAIR;Acc:AT5G28280]
AT5G14970
gene
5.00
5:04847247
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1)%3B Has 579 Blast hits to 397 proteins in 95 species: Archae - 0%3B Bacteria - 294%3B Metazoa - 0%3B Fungi - 0%3B Plants - 86%3B Viruses - 0%3B Other Eukaryotes - 199 (source: NCBI BLink).
AT5G17600
gene
4.99
5:05799432
RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G04160
gene
4.97
5:01142735
Nucleotide-sugar transporter family protein%3B FUNCTIONS IN: organic anion transmembrane transporter activity%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853)%3B BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT3G10290.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G15990
gene
CNGC7
4.78
1:05491133
Encodes a plasma membrane localized member of the cyclic nucleotide gated channel (CNGC) family that is essential for male reproductive fertility.
AT5G17220
gene
GSTF12
4.67
5:05658416
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems. Likely to function as a carrier to transport anthocyanin from the cytosol to tonoplasts.
AT5G18480
gene
PGSIP6
4.59
5:06131130
Encodes an IPC (inositol phosphorylceramide) glucuronosyltransferase. Defects in transmission via the pollen are evident but the defect in transmission through the male gametophyte is not due to improper pollen development or inability of pollen tubes to germinate and grow.
AT5G15440
gene
EDL1
4.56
5:05012061
EID1-like 1 (EDL1)%3B BEST Arabidopsis thaliana protein match is: EID1-like 2 (TAIR:AT5G39360.1)%3B Has 152 Blast hits to 132 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 152%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G17250
gene
4.41
5:05668993
Alkaline-phosphatase-like family protein%3B FUNCTIONS IN: transferase activity%2C catalytic activity%3B INVOLVED IN: GPI anchor biosynthetic process%2C metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591)%2C Alkaline-phosphatase-like%2C core domain (InterPro:IPR017850)%3B BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT2G22530.1)%3B Has 1431 Blast hits to 1201 proteins in 306 species: Archae - 0%3B Bacteria - 228%3B Metazoa - 476%3B Fungi - 488%3B Plants - 85%3B Viruses - 0%3B Other Eukaryotes - 154 (source: NCBI BLink).
AT1G75900
gene
4.39
1:28498821
GDSL-like Lipase/Acylhydrolase superfamily protein%3B CONTAINS InterPro DOMAIN/s: Lipase%2C GDSL%2C active site (InterPro:IPR008265)%2C Lipase%2C GDSL (InterPro:IPR001087)%3B BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2)%3B Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0%3B Bacteria - 282%3B Metazoa - 0%3B Fungi - 26%3B Plants - 3125%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT5G14610
gene
4.36
5:04710563
DEAD box RNA helicase family protein%3B FUNCTIONS IN: helicase activity%2C nucleic acid binding%2C ATP binding%2C ATP-dependent helicase activity%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C RNA helicase%2C ATP-dependent%2C DEAD-box%2C conserved site (InterPro:IPR000629)%2C WW/Rsp5/WWP (InterPro:IPR001202)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.1)%3B Has 72370 Blast hits to 57752 proteins in 3325 species: Archae - 968%3B Bacteria - 36637%3B Metazoa - 12013%3B Fungi - 6274%3B Plants - 5549%3B Viruses - 294%3B Other Eukaryotes - 10635 (source: NCBI BLink).
AT5G14790
gene
4.25
5:04782909
ARM repeat superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G01450.1)%3B Has 322 Blast hits to 322 proteins in 81 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 157%3B Fungi - 10%3B Plants - 125%3B Viruses - 0%3B Other Eukaryotes - 30 (source: NCBI BLink).
AT5G11800
gene
KEA6
4.20
5:03803315
member of Putative potassium proton antiporter family
AT1G65330
gene
PHE1
4.09
1:24266257
Type I MADS-box protein%2C regulated by MEA and FIE%2C expressed transiently after fertilization in embryo and endosperm.
AT4G25430
gene
TRM23
4.06
4:12998361
unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT2G35150
gene
EXL7
4.03
2:14817047
Encodes EXORDIUM LIKE 7.
AT5G20480
gene
EFR
3.99
5:06921509
Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.
AT1G11960
gene
3.99
1:04039566
ERD (early-responsive to dehydration stress) family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864)%3B BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT1G62320.1)%3B Has 1452 Blast hits to 1271 proteins in 185 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 184%3B Fungi - 702%3B Plants - 435%3B Viruses - 0%3B Other Eukaryotes - 127 (source: NCBI BLink).
AT5G17050
gene
UGT78D2
3.99
5:05607788
The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.
AT5G19810
gene
3.86
5:06692909
Proline-rich extensin-like family protein%3B LOCATED IN: endomembrane system%3B BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G19800.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G08750
gene
3.80
5:02851814
RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G63780.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G05690
gene
NF-YA2
3.79
3:01676504
Encodes a subunit of CCAAT-binding complex%2C binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A%2C HAP2B%2C HAP2C)%2C it is expressed in vegetative and reproductive tissues.
AT2G21185
gene
3.79
2:09076437
unknown protein%3B Has 9 Blast hits to 9 proteins in 4 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 9%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G10870
gene
CM2
3.71
5:03430497
Encodes chorismate mutase AtCM2.
AT5G17350
gene
3.71
5:05718498
unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 8 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G24020
gene
MLP423
3.70
1:08500119
MLP-like protein 423 (MLP423)%3B INVOLVED IN: response to biotic stimulus%2C defense response%3B LOCATED IN: membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916)%3B BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3)%3B Has 1440 Blast hits to 1404 proteins in 125 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1432%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT3G46900
gene
COPT2
3.70
3:17268700
encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast
AT4G10950
gene
3.68
4:06711386
SGNH hydrolase-type esterase superfamily protein%3B FUNCTIONS IN: hydrolase activity%2C acting on ester bonds%2C carboxylesterase activity%3B INVOLVED IN: lipid metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Lipase%2C GDSL (InterPro:IPR001087)%2C Esterase%2C SGNH hydrolase-type (InterPro:IPR013830)%3B BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G18070
gene
DRT101
3.65
5:05980769
encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).
AT1G63890
gene
None
3.63
None:
None
AT5G17490
gene
RGL3
3.57
5:05763989
DELLA subfamily member involved in GA signal transduction
AT2G16930
gene
3.54
2:07341078
Ribosomal protein L27 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C intracellular%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L27 (InterPro:IPR001684)%2C Ribosomal protein L27%2C conserved site (InterPro:IPR018261)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L27 family protein (TAIR:AT5G15220.1)%3B Has 7688 Blast hits to 7688 proteins in 2721 species: Archae - 0%3B Bacteria - 5395%3B Metazoa - 115%3B Fungi - 142%3B Plants - 116%3B Viruses - 0%3B Other Eukaryotes - 1920 (source: NCBI BLink).
AT1G09530
gene
PIF3
3.54
1:03075768
Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY%2C CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes%2C but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.
AT5G15070
gene
3.53
5:04876515
Phosphoglycerate mutase-like family protein%3B FUNCTIONS IN: oxidoreductase activity%2C transition metal ion binding%2C acid phosphatase activity%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily%2C clade-2 (InterPro:IPR000560)%2C Ferritin/ribonucleotide reductase-like (InterPro:IPR009078)%3B BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G18710
gene
3.47
5:06241134
Domain of unknown function (DUF3444)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18730.1)%3B Has 358 Blast hits to 276 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 358%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT3G43920
gene
DCL3
3.46
3:15753387
Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.
AT1G02050
gene
LAP6
3.45
1:00359117
LESS ADHESIVE POLLEN 6 (LAP6)%3B FUNCTIONS IN: transferase activity%2C transferring acyl groups other than amino-acyl groups%2C catalytic activity%2C acyltransferase activity%3B INVOLVED IN: phenylpropanoid biosynthetic process%2C pollen exine formation%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase%2C N-terminal (InterPro:IPR001099)%2C Thiolase-like (InterPro:IPR016039)%2C Polyketide synthase%2C type III (InterPro:IPR011141)%2C Thiolase-like%2C subgroup (InterPro:IPR016038)%2C Chalcone/stilbene synthase%2C C-terminal (InterPro:IPR012328)%3B BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G00040.1)%3B Has 6482 Blast hits to 6477 proteins in 1606 species: Archae - 0%3B Bacteria - 2500%3B Metazoa - 0%3B Fungi - 67%3B Plants - 3666%3B Viruses - 0%3B Other Eukaryotes - 249 (source: NCBI BLink).
AT5G10480
gene
PAS2
3.41
5:03297804
Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA%3B1 only in its phosphorylated form%2C preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10%2C a component of the microsomal fatty acid elongase complex%2C suggesting a role in synthesis of VLCFAs (very long chain fatty acids).
AT5G10320
gene
3.37
5:03243915
unknown protein%3B Has 54 Blast hits to 53 proteins in 19 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 0%3B Fungi - 0%3B Plants - 50%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT2G14650
gene
3.32
2:00000000
transposable element gene [Source:TAIR;Acc:AT2G14650]
AT5G17770
gene
CBR
3.32
5:05864182
Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A)%2C whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.
AT5G12330
gene
LRP1
3.32
5:03987375
A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.
AT5G63540
gene
RMI1
3.31
5:25440783
Encodes RMI1. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.
AT4G02660
gene
3.30
4:01159494
Beige/BEACH domain %3BWD domain%2C G-beta repeat protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: signal transduction%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C Beige/BEACH (InterPro:IPR000409)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C Armadillo-type fold (InterPro:IPR016024)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Beige/BEACH domain %3BWD domain%2C G-beta repeat protein (TAIR:AT1G03060.1)%3B Has 7684 Blast hits to 5756 proteins in 390 species: Archae - 8%3B Bacteria - 1306%3B Metazoa - 3489%3B Fungi - 1068%3B Plants - 719%3B Viruses - 0%3B Other Eukaryotes - 1094 (source: NCBI BLink).
AT4G34400
gene
3.30
4:16445141
AP2/B3-like transcriptional factor family protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340)%3B BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G06160.2)%3B Has 17257 Blast hits to 10862 proteins in 685 species: Archae - 48%3B Bacteria - 3184%3B Metazoa - 5526%3B Fungi - 2028%3B Plants - 1203%3B Viruses - 203%3B Other Eukaryotes - 5065 (source: NCBI BLink).
AT1G23730
gene
BCA3
3.29
1:08395466
beta carbonic anhydrase 3 (BCA3)%3B FUNCTIONS IN: carbonate dehydratase activity%2C zinc ion binding%3B INVOLVED IN: carbon utilization%3B LOCATED IN: cytosol%2C plasma membrane%2C membrane%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Carbonic anhydrase%2C prokaryotic-like%2C conserved site (InterPro:IPR015892)%2C Carbonic anhydrase (InterPro:IPR001765)%3B BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 4 (TAIR:AT1G70410.1)%3B Has 5075 Blast hits to 5060 proteins in 1504 species: Archae - 26%3B Bacteria - 3914%3B Metazoa - 59%3B Fungi - 205%3B Plants - 361%3B Viruses - 0%3B Other Eukaryotes - 510 (source: NCBI BLink).
AT2G46950
gene
CYP709B2
3.26
2:19289087
member of CYP709B
AT5G15010
gene
3.25
5:04857147
Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80880.1)%3B Has 37863 Blast hits to 13191 proteins in 288 species: Archae - 3%3B Bacteria - 35%3B Metazoa - 443%3B Fungi - 342%3B Plants - 35932%3B Viruses - 0%3B Other Eukaryotes - 1108 (source: NCBI BLink).
AT5G16450
gene
3.23
5:05373820
Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase%3B FUNCTIONS IN: ribonuclease inhibitor activity%3B INVOLVED IN: regulation of RNA metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (InterPro:IPR005493)%2C Ribonuclease E inhibitor RraA (InterPro:IPR010203)%3B BEST Arabidopsis thaliana protein match is: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (TAIR:AT3G02770.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G47870
gene
RAD52-2
3.22
5:19384368
FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G16440
gene
IPP1
3.22
5:05371627
Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate%2C but not the MEP biosynthetic pathway.
AT3G04290
gene
LTL1
3.20
3:01133320
Li-tolerant lipase 1 (LTL1)%3B FUNCTIONS IN: hydrolase activity%2C acting on ester bonds%2C carboxylesterase activity%3B INVOLVED IN: lipid metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Lipase%2C GDSL (InterPro:IPR001087)%2C Esterase%2C SGNH hydrolase-type (InterPro:IPR013830)%3B BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G33370.1)%3B Has 3364 Blast hits to 3325 proteins in 174 species: Archae - 0%3B Bacteria - 234%3B Metazoa - 0%3B Fungi - 3%3B Plants - 3111%3B Viruses - 0%3B Other Eukaryotes - 16 (source: NCBI BLink).
AT5G10350
gene
3.19
5:03255236
RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: protein binding%2C RNA binding%2C poly(A) RNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G65260.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G13670
gene
3.19
1:04688018
unknown protein%3B Has 22 Blast hits to 22 proteins in 7 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 22%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G15460
gene
MUB2
3.17
5:05018680
membrane-anchored ubiquitin-fold protein 2 (MUB2)%3B CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein%2C HCG-1 (InterPro:IPR017000)%3B BEST Arabidopsis thaliana protein match is: membrane-anchored ubiquitin-fold protein 1 precursor (TAIR:AT3G01050.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT3G13350
gene
3.17
3:04335475
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B LOCATED IN: nucleus%2C intracellular%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: High mobility group%2C superfamily (InterPro:IPR009071)%2C High mobility group%2C HMG1/HMG2 (InterPro:IPR000910)%2C ARID/BRIGHT DNA-binding domain (InterPro:IPR001606)%3B BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G55650.1)%3B Has 1937 Blast hits to 1906 proteins in 204 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1434%3B Fungi - 73%3B Plants - 249%3B Viruses - 0%3B Other Eukaryotes - 181 (source: NCBI BLink).
AT5G45240
gene
3.14
5:18313706
Disease resistance protein (TIR-NBS-LRR class)%3B FUNCTIONS IN: transmembrane receptor activity%2C ATP binding%3B INVOLVED IN: signal transduction%2C apoptosis%2C defense response%2C innate immune response%3B LOCATED IN: intrinsic to membrane%3B CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182)%2C Leucine-rich repeat (InterPro:IPR001611)%2C Disease resistance protein (InterPro:IPR000767)%2C Toll-Interleukin receptor (InterPro:IPR000157)%3B BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G51560.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G02660
gene
3.11
1:00571826
alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: triglyceride lipase activity%3B INVOLVED IN: lipid metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Lipase%2C class 3 (InterPro:IPR002921)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G62590.1)%3B Has 747 Blast hits to 737 proteins in 148 species: Archae - 0%3B Bacteria - 27%3B Metazoa - 209%3B Fungi - 146%3B Plants - 175%3B Viruses - 15%3B Other Eukaryotes - 175 (source: NCBI BLink).
AT5G14730
gene
3.08
5:04756057
unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01513.1)%3B Has 85 Blast hits to 83 proteins in 14 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 0%3B Fungi - 0%3B Plants - 76%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G16400
gene
TRXF2
3.08
5:05363420
Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma.
AT2G02580
gene
CYP71B9
3.07
2:00701932
member of CYP71B
AT5G13730
gene
SIG4
3.06
5:04429095
Encodes sigma 4 factor%2C involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.
AT1G32850
gene
UBP11
3.04
1:11902629
ubiquitin-specific protease 11 (UBP11)%3B FUNCTIONS IN: cysteine-type endopeptidase activity%2C ubiquitin thiolesterase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C pollen tube%3B EXPRESSED DURING: M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin-specific peptidase%2C DUSP domain (InterPro:IPR006615)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 10 (TAIR:AT4G10590.1)%3B Has 11311 Blast hits to 7509 proteins in 254 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 5825%3B Fungi - 2000%3B Plants - 1417%3B Viruses - 8%3B Other Eukaryotes - 2055 (source: NCBI BLink).
AT5G13960
gene
SUVH4
3.04
5:04501362
Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog%2C a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants%2C there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG%2C CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.
