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Show all genes, phenotypes and metabolites for which the QTL profile correlates with that of the query profile above the set cut-off, the query trait is in the first row. Strongly correlating QTL profiles could indicate common regulation.
Trait ID (count=6) Type Name Pearson's Correlation Coefficient Position Description
AT5G20650 gene COPT5 1.00 5:6985298 Encodes COPT5%2C a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast. Plays an important role in the plant response to environmental copper scarcity%2C probably by remobilizing copper from prevacuolar vesicles%2C which could act as internal stores or recycling vesicles to provide the metal cofactor to key copper-dependent processes such as photosynthesis.
AT5G46430 gene 0.93 5:18833240 Ribosomal protein L32e%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515)%2C Ribosomal protein L32e%2C conserved site (InterPro:IPR018263)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT4G18100.1)%3B Has 1473 Blast hits to 1473 proteins in 440 species: Archae - 299%3B Bacteria - 0%3B Metazoa - 710%3B Fungi - 138%3B Plants - 154%3B Viruses - 0%3B Other Eukaryotes - 172 (source: NCBI BLink).
AT1G53645 gene 0.92 1:20026016 hydroxyproline-rich glycoprotein family protein%3B Has 15375 Blast hits to 12179 proteins in 920 species: Archae - 8%3B Bacteria - 1425%3B Metazoa - 5915%3B Fungi - 2848%3B Plants - 1527%3B Viruses - 230%3B Other Eukaryotes - 3422 (source: NCBI BLink).
AT1G30580 gene 0.91 1:10831673 GTP binding%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: response to cadmium ion%3B LOCATED IN: intracellular%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029)%2C TGS-like (InterPro:IPR012676)%2C GTP1/OBG (InterPro:IPR006073)%2C Conserved hypothetical protein CHP00092 (InterPro:IPR004396)%2C GTP-binding protein%2C HSR1-related (InterPro:IPR002917)%2C Beta-grasp fold%2C ferredoxin-type (InterPro:IPR012675)%3B BEST Arabidopsis thaliana protein match is: GTP-binding protein-related (TAIR:AT1G56050.1)%3B Has 19150 Blast hits to 19146 proteins in 3028 species: Archae - 362%3B Bacteria - 11244%3B Metazoa - 716%3B Fungi - 612%3B Plants - 292%3B Viruses - 0%3B Other Eukaryotes - 5924 (source: NCBI BLink).
AT5G20890 gene 0.91 5:7086653 TCP-1/cpn60 chaperonin family protein%3B FUNCTIONS IN: unfolded protein binding%2C ATP binding%3B INVOLVED IN: protein folding%2C cellular protein metabolic process%3B LOCATED IN: anchored to plasma membrane%2C cell wall%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperone%2C tailless complex polypeptide 1 (InterPro:IPR017998)%2C T-complex protein 1%2C beta subunit (InterPro:IPR012716)%2C Chaperonin TCP-1%2C conserved site (InterPro:IPR002194)%3B BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1)%3B Has 19831 Blast hits to 19435 proteins in 3922 species: Archae - 807%3B Bacteria - 9602%3B Metazoa - 2181%3B Fungi - 1427%3B Plants - 861%3B Viruses - 0%3B Other Eukaryotes - 4953 (source: NCBI BLink).
AT1G63660 gene 0.90 1:23603791 GMP synthase (glutamine-hydrolyzing)%2C putative / glutamine amidotransferase%2C putative%3B FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity%2C catalytic activity%2C GMP synthase (glutamine-hydrolyzing) activity%2C ATP binding%3B INVOLVED IN: in 7 processes%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I%2C C-terminal (InterPro:IPR000991)%2C Glutamine amidotransferase superfamily (InterPro:IPR011702)%2C GMP synthase%2C N-terminal (InterPro:IPR004739)%2C GMP synthase%2C C-terminal (InterPro:IPR001674)%2C Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729)%2C Glutamine amidotransferase type 1 (InterPro:IPR017926)%2C Asparagine synthase (InterPro:IPR001962)%2C Anthranilate synthase component II/delta crystallin (InterPro:IPR006220)%3B Has 20887 Blast hits to 20751 proteins in 2946 species: Archae - 738%3B Bacteria - 12164%3B Metazoa - 273%3B Fungi - 298%3B Plants - 185%3B Viruses - 0%3B Other Eukaryotes - 7229 (source: NCBI BLink).