| Trait ID (count=14) | Type | Name | Pearson's Correlation Coefficient | Position | Description | ||
|---|---|---|---|---|---|---|---|
| AT2G43960 | gene | 1.00 | 2:18203312 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: RNA processing%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061)%3B BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT5G06520.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). | |||
| AT2G42500 | gene | PP2A-3 | 0.98 | 2:17697626 | Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1%2C AT1G10430/PP2A-2%2C At2g42500/PP2A-3%2C At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528%3B Note that in more recent publications%2C there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. | ||
| AT2G43530 | gene | 0.97 | 2:18070110 | Encodes a defensin-like (DEFL) family protein. | |||
| AT2G42590 | gene | GRF9 | 0.96 | 2:17731830 | 14-3-3 gene. Binds calcium and displays induced structural changes. | ||
| AT2G43950 | gene | OEP37 | 0.96 | 2:18200316 | Constitutes a peptide sensitive ion channel in chloroplast outer membranes. Accumulates in germinating seeds and developing embryos. | ||
| AT2G43970 | gene | LARP6b | 0.96 | 2:18205235 | RNA-binding protein%3B FUNCTIONS IN: RNA binding%2C nucleic acid binding%3B INVOLVED IN: RNA processing%3B LOCATED IN: ribonucleoprotein complex%2C nucleus%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C RNA-binding protein Lupus La (InterPro:IPR006630)%2C Lupus La protein (InterPro:IPR002344)%3B BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT3G19090.1)%3B Has 5436 Blast hits to 4197 proteins in 373 species: Archae - 4%3B Bacteria - 353%3B Metazoa - 1802%3B Fungi - 477%3B Plants - 426%3B Viruses - 18%3B Other Eukaryotes - 2356 (source: NCBI BLink). | ||
| AT2G42170 | gene | 0.96 | 2:17577714 | Actin family protein%3B FUNCTIONS IN: structural constituent of cytoskeleton%2C ATP binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: actin cytoskeleton%3B EXPRESSED IN: vascular bundle%3B CONTAINS InterPro DOMAIN/s: Actin%2C conserved site (InterPro:IPR004001)%2C Actin/actin-like (InterPro:IPR004000)%3B BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1)%3B Has 13233 Blast hits to 12851 proteins in 2620 species: Archae - 6%3B Bacteria - 13%3B Metazoa - 5650%3B Fungi - 3392%3B Plants - 1602%3B Viruses - 2%3B Other Eukaryotes - 2568 (source: NCBI BLink). | |||
| AT2G44620 | gene | MTACP-1 | 0.96 | 2:18414201 | Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix%2C it is likely to be involved in fatty acid or lipoic acid biogenesis. Its acylated form is predominantly present in the mitochondrial membrane while the non-acylated form is soluble. | ||
| AT2G44230 | gene | 0.93 | 2:18286321 | Plant protein of unknown function (DUF946)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT2G44260.1)%3B Has 432 Blast hits to 414 proteins in 115 species: Archae - 0%3B Bacteria - 34%3B Metazoa - 43%3B Fungi - 133%3B Plants - 207%3B Viruses - 0%3B Other Eukaryotes - 15 (source: NCBI BLink). | |||
| AT2G42910 | gene | 0.92 | 2:17856249 | Phosphoribosyltransferase family protein%3B FUNCTIONS IN: magnesium ion binding%2C ribose phosphate diphosphokinase activity%3B INVOLVED IN: nucleotide biosynthetic process%2C nucleoside metabolic process%3B LOCATED IN: plasma membrane%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836)%2C Phosphoribosyl pyrophosphokinase (InterPro:IPR005946)%3B BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 3 (TAIR:AT1G10700.1)%3B Has 8791 Blast hits to 8791 proteins in 2571 species: Archae - 151%3B Bacteria - 5499%3B Metazoa - 381%3B Fungi - 325%3B Plants - 200%3B Viruses - 13%3B Other Eukaryotes - 2222 (source: NCBI BLink). | |||
| AT2G41470 | gene | 0.92 | 2:17289952 | unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: vacuole%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41440.1)%3B Has 1066 Blast hits to 825 proteins in 144 species: Archae - 7%3B Bacteria - 46%3B Metazoa - 465%3B Fungi - 36%3B Plants - 67%3B Viruses - 4%3B Other Eukaryotes - 441 (source: NCBI BLink). | |||
| AT2G40570 | gene | 0.92 | 2:16940822 | initiator tRNA phosphoribosyl transferase family protein%3B FUNCTIONS IN: transferase activity%2C transferring pentosyl groups%2C protein tyrosine/serine/threonine phosphatase activity%3B INVOLVED IN: protein amino acid dephosphorylation%2C regulation of translation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Initiator tRNA phosphoribosyl transferase (InterPro:IPR007306)%2C Dual specificity phosphatase%2C catalytic domain (InterPro:IPR000340)%2C tRNA A64-2%26apos%3B-O-ribosylphosphate transferase%2C RIT1 (InterPro:IPR016519)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). | |||
| AT2G41600 | gene | 0.91 | 2:17344637 | Mitochondrial glycoprotein family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrial matrix%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428)%3B Has 28 Blast hits to 28 proteins in 6 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 28%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). | |||
| AT2G40010 | gene | 0.90 | 2:16708379 | Ribosomal protein L10 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translational elongation%2C translation%2C ribosome biogenesis%3B LOCATED IN: cytosolic ribosome%2C ribosome%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813)%2C Ribosomal protein L10 (InterPro:IPR001790)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1)%3B Has 1619 Blast hits to 1617 proteins in 478 species: Archae - 322%3B Bacteria - 4%3B Metazoa - 504%3B Fungi - 295%3B Plants - 181%3B Viruses - 0%3B Other Eukaryotes - 313 (source: NCBI BLink). | |||