| Trait ID (count=19) | Type | Name | Pearson's Correlation Coefficient | Position | Description | ||
|---|---|---|---|---|---|---|---|
| AT1G03910 | gene | 1.00 | 1:996076 | Encodes the Arabidopsis homolog of a conserved eukaryotic protein without known functional domains. The protein that localizes to nuclear speckles and colocalizes with known splicing proteins. | |||
| AT5G14050 | gene | 0.93 | 5:4533131 | Transducin/WD40 repeat-like superfamily protein%3B FUNCTIONS IN: nucleotide binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: CUL4 RING ubiquitin ligase complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1)%3B Has 6115 Blast hits to 4690 proteins in 400 species: Archae - 26%3B Bacteria - 2036%3B Metazoa - 1593%3B Fungi - 1149%3B Plants - 369%3B Viruses - 2%3B Other Eukaryotes - 940 (source: NCBI BLink). | |||
| AT5G20600 | gene | 0.93 | 5:6966178 | FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: rRNA processing%3B LOCATED IN: preribosome%2C small subunit precursor%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleolar%2C Nop52 (InterPro:IPR010301)%3B Has 543 Blast hits to 530 proteins in 201 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 211%3B Fungi - 164%3B Plants - 46%3B Viruses - 0%3B Other Eukaryotes - 112 (source: NCBI BLink). | |||
| AT3G13860 | gene | HSP60-3A | 0.93 | 3:4561517 | heat shock protein 60-3A (HSP60-3A)%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: response to cadmium ion%3B LOCATED IN: mitochondrion%2C plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperonin Cpn60%2C conserved site (InterPro:IPR018370)%2C Chaperonin Cpn60 (InterPro:IPR001844)%3B BEST Arabidopsis thaliana protein match is: heat shock protein 60 (TAIR:AT3G23990.1)%3B Has 33806 Blast hits to 33780 proteins in 8724 species: Archae - 691%3B Bacteria - 21872%3B Metazoa - 1598%3B Fungi - 1587%3B Plants - 751%3B Viruses - 2%3B Other Eukaryotes - 7305 (source: NCBI BLink). | ||
| AT5G03740 | gene | HD2C | 0.93 | 5:981859 | HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression | ||
| AT4G15880 | gene | ESD4 | 0.93 | 4:9012552 | EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease%2C located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time%2C vegetative and inflorescence development. | ||
| AT1G30290 | gene | 0.92 | 1:10670129 | unknown protein | |||
| AT1G26460 | gene | 0.92 | 1:9151628 | Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1)%3B Has 8798 Blast hits to 4372 proteins in 169 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 106%3B Plants - 8403%3B Viruses - 0%3B Other Eukaryotes - 284 (source: NCBI BLink). | |||
| AT1G14380 | gene | IQD28 | 0.92 | 1:4918010 | Encodes a microtubule-associated protein. | ||
| AT5G42970 | gene | COP8 | 0.92 | 5:17237153 | encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. | ||
| AT4G14920 | gene | 0.91 | 4:8530809 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Acyl-CoA N-acyltransferase (InterPro:IPR016181)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2)%3B Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 811%3B Fungi - 61%3B Plants - 450%3B Viruses - 0%3B Other Eukaryotes - 80 (source: NCBI BLink). | |||
| AT3G60350 | gene | ARABIDILLO-2 | 0.91 | 3:22306488 | ARABIDILLO-2 and its homolog%2C ARABIDILLO -1%2C are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-2 promote lateral root development. Mutant plants form fewer lateral roots%2C while ARABIDILLO-2-overexpressing lines produce more lateral roots than wild-type seedlings. | ||
| AT4G38750 | gene | None | 0.91 | None:None | None | ||
| AT3G21290 | gene | 0.91 | 3:7482106 | dentin sialophosphoprotein-related%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Occludin/RNA polymerase II elongation factor%2C ELL domain (InterPro:IPR010844)%3B Has 17175 Blast hits to 8691 proteins in 788 species: Archae - 88%3B Bacteria - 6651%3B Metazoa - 4182%3B Fungi - 1520%3B Plants - 456%3B Viruses - 109%3B Other Eukaryotes - 4169 (source: NCBI BLink). | |||
| AT4G07410 | gene | PCN | 0.90 | 4:4200506 | Encodes a WD-40 protein expressed both during embryo development and postembryonically in the SAM and RAM that functions in the auxin pathway%2C integrating auxin signaling in the organization and maintenance of the SAM and RAM. | ||
| AT3G53110 | gene | LOS4 | 0.90 | 3:19687740 | Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. | ||
| AT1G54270 | gene | EIF4A-2 | 0.90 | 1:20259547 | member of eIF4A - eukaryotic initiation factor 4A | ||
| AT1G72650 | gene | TRFL6 | 0.90 | 1:27349393 | Arabidopsis thaliana myb family transcription factor (At1g72650) | ||
| AT4G29680 | gene | 0.90 | 4:14537638 | Alkaline-phosphatase-like family protein%3B FUNCTIONS IN: hydrolase activity%2C catalytic activity%3B INVOLVED IN: metabolic process%2C nucleotide metabolic process%3B LOCATED IN: vacuole%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like%2C alpha/beta/alpha (InterPro:IPR017849)%2C Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591)%2C Alkaline-phosphatase-like%2C core domain (InterPro:IPR017850)%3B BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1)%3B Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13%3B Bacteria - 1090%3B Metazoa - 671%3B Fungi - 207%3B Plants - 107%3B Viruses - 6%3B Other Eukaryotes - 352 (source: NCBI BLink). | |||