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Show all genes, phenotypes and metabolites for which the QTL profile correlates with that of the query profile above the set cut-off, the query trait is in the first row. Strongly correlating QTL profiles could indicate common regulation.
Trait ID (count=21) Type Name Pearson's Correlation Coefficient Position Description
AT4G01590 gene 1.00 4:688813 unknown protein%3B BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35680.1)%3B Has 1908 Blast hits to 1345 proteins in 175 species: Archae - 3%3B Bacteria - 106%3B Metazoa - 494%3B Fungi - 346%3B Plants - 115%3B Viruses - 71%3B Other Eukaryotes - 773 (source: NCBI BLink).
AT4G01960 gene 0.96 4:850914 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1)%3B Has 67 Blast hits to 67 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 67%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G01220 gene MGP4 0.96 4:513053 Encodes MGP4 (MALE GAMETOPHYTE DEFECTIVE 4)%2C a rhamnogalacturonan II xylosyltransferase important for growth of pollen tubes and roots.
AT4G01026 gene PYL7 0.96 4:446978 Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of ABI1 and ABI2.
AT4G01920 gene 0.96 4:828826 Cysteine/Histidine-rich C1 domain family protein%3B INVOLVED IN: intracellular signaling pathway%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase C-like%2C phorbol ester/diacylglycerol binding (InterPro:IPR002219)%2C DC1 (InterPro:IPR004146)%2C C1-like (InterPro:IPR011424)%3B BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01930.1)%3B Has 1803 Blast hits to 665 proteins in 40 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 41%3B Fungi - 0%3B Plants - 1752%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink).
AT3G28590 gene 0.95 3:10718320 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79170.1)%3B Has 1 Blast hits to 1 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G00600 gene 0.95 4:255320 Amino acid dehydrogenase family protein%3B FUNCTIONS IN: binding%2C catalytic activity%3B INVOLVED IN: folic acid and derivative biosynthetic process%2C metabolic process%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain (InterPro:IPR020631)%2C Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672)%2C NAD(P)-binding domain (InterPro:IPR016040)%2C Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain (InterPro:IPR020630)%3B BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G02580 gene 0.95 4:1134429 NADH-ubiquinone oxidoreductase 24 kDa subunit%2C putative%3B FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity%2C zinc ion binding%3B INVOLVED IN: response to oxidative stress%2C mitochondrial electron transport%2C NADH to ubiquinone%3B LOCATED IN: mitochondrion%2C mitochondrial respiratory chain complex I%2C respiratory chain complex I%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335)%2C NADH:ubiquinone oxidoreductase%2C 24kDa subunit (InterPro:IPR002023)%2C Thioredoxin-like fold (InterPro:IPR012336)%3B Has 5564 Blast hits to 5564 proteins in 1535 species: Archae - 26%3B Bacteria - 3396%3B Metazoa - 195%3B Fungi - 114%3B Plants - 49%3B Viruses - 0%3B Other Eukaryotes - 1784 (source: NCBI BLink).
AT4G01110 gene 0.94 4:479963 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1)%3B Has 273 Blast hits to 272 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 273%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G01880 gene 0.94 4:810657 methyltransferases%3B FUNCTIONS IN: methyltransferase activity%3B INVOLVED IN: tRNA processing%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type%2C TRM13 (InterPro:IPR021721)%2C Methyltransferase TRM13 (InterPro:IPR007871)%3B Has 320 Blast hits to 305 proteins in 140 species: Archae - 2%3B Bacteria - 9%3B Metazoa - 124%3B Fungi - 54%3B Plants - 43%3B Viruses - 0%3B Other Eukaryotes - 88 (source: NCBI BLink).
AT4G01410 gene 0.94 4:578028 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 1 (TAIR:AT3G11660.1)%3B Has 938 Blast hits to 938 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 938%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT4G01070 gene GT72B1 0.94 4:461513 the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta
AT4G01910 gene 0.93 4:824555 Cysteine/Histidine-rich C1 domain family protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: intracellular signaling pathway%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Protein kinase C-like%2C phorbol ester/diacylglycerol binding (InterPro:IPR002219)%2C DC1 (InterPro:IPR004146)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C C1-like (InterPro:IPR011424)%3B BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01930.1)%3B Has 2063 Blast hits to 754 proteins in 51 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 95%3B Fungi - 0%3B Plants - 1951%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).
AT4G01740 gene 0.93 4:753422 Cysteine/Histidine-rich C1 domain family protein%3B CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146)%2C C1-like (InterPro:IPR011424)%3B BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01930.1)%3B Has 1534 Blast hits to 622 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 1528%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
AT4G02420 gene 0.92 4:1064114 Concanavalin A-like lectin protein kinase family protein%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Legume lectin%2C beta chain (InterPro:IPR001220)%2C Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Concanavalin A-like lectin/glucanase%2C subgroup (InterPro:IPR013320)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Concanavalin A-like lectin/glucanase (InterPro:IPR008985)%3B BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G02410.1)%3B Has 115117 Blast hits to 113792 proteins in 4484 species: Archae - 103%3B Bacteria - 12860%3B Metazoa - 42338%3B Fungi - 9449%3B Plants - 33733%3B Viruses - 419%3B Other Eukaryotes - 16215 (source: NCBI BLink).
AT4G01940 gene NFU1 0.92 4:841989 Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family%2C more closely related to NFU2 and 3 than to NFU4 and 5. Targeted to the chloroplast.
AT4G01900 gene GLB1 0.92 4:821546 encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.
AT4G00650 gene FRI 0.92 4:268901 Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.
AT4G00130 gene 0.91 4:48114 DNA-binding storekeeper protein-related transcriptional regulator%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592)%3B BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G25210.1)%3B Has 94 Blast hits to 94 proteins in 6 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 93%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).
AT4G01090 gene 0.90 4:470506 Protein of unknown function (DUF3133)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT1G01440.1)%3B Has 1545 Blast hits to 1451 proteins in 231 species: Archae - 0%3B Bacteria - 62%3B Metazoa - 476%3B Fungi - 316%3B Plants - 452%3B Viruses - 2%3B Other Eukaryotes - 237 (source: NCBI BLink).
AT4G13190 gene 0.90 4:7659303 Protein kinase superfamily protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1)%3B Has 115847 Blast hits to 114617 proteins in 4231 species: Archae - 103%3B Bacteria - 13752%3B Metazoa - 42167%3B Fungi - 9708%3B Plants - 32895%3B Viruses - 382%3B Other Eukaryotes - 16840 (source: NCBI BLink).
GO domain Definition P-value
protein-disulfide reductase activity molecular_function "Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+." [EC:1.8.1.8, MetaCyc:1.6.4.4-RXN] 3.36e-02