Show all genes, phenotypes and metabolites for which the QTL profile correlates with that of the query profile above the set cut-off, the query trait is in the first row.
Strongly correlating QTL profiles could indicate common regulation.
Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response.
Encodes a member of the WNK family (9 members in all) of protein kinases%2C the structural design of which is clearly distinct from those of other known protein kinases%2C such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C%2C subunit C of the vacuolar H+-ATPase.
Leucine-rich repeat protein kinase family protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Leucine-rich repeat-containing N-terminal domain%2C type 2 (InterPro:IPR013210)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1)%3B Has 105441 Blast hits to 101727 proteins in 4175 species: Archae - 121%3B Bacteria - 11886%3B Metazoa - 36736%3B Fungi - 8087%3B Plants - 34277%3B Viruses - 298%3B Other Eukaryotes - 14036 (source: NCBI BLink).
Protein of unknown function (DUF604)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
Lactoylglutathione lyase / glyoxalase I family protein%3B CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360)%3B BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G64185.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
WPP family members contains an NE targeting domain. This domain%2C called the WPP domain after a highly conserved Trp-Pro-Pro motif%2C is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.
Encodes a chlorophyllase%2C the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate%2C a known promoter of senescence and chlorophyll degradation.
Protein of unknown function%2C DUF617%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617%2C plant (InterPro:IPR006460)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function%2C DUF617 (TAIR:AT4G39610.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
Encodes the peroxisomal delta 3%2C5-delta2%2C4-dienoyl-CoA isomerase%2C a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination.
Encodes the electron transfer flavoprotein ETF beta%2C a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.
Encodes AHP3%2C one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs) involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1)%2C AT3G29350 (AHP2)%2C AT5G39340 (AHP3)%2C AT3G16360 (AHP4)%2C AT1G03430 (AHP5) and AT1G80100 (AHP6).
Malectin/receptor-like protein kinase family protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Malectin/receptor-like protein kinase (InterPro:IPR021720)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G39030.1)%3B Has 113939 Blast hits to 112470 proteins in 4297 species: Archae - 118%3B Bacteria - 12172%3B Metazoa - 42643%3B Fungi - 9539%3B Plants - 32560%3B Viruses - 275%3B Other Eukaryotes - 16632 (source: NCBI BLink).
Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens%2C independent of salicylic acid%2C ethylene and jasmonate signaling.
Encodes a chloroplast localized protein that is involved in protein translocation and starch metabolism. PTST helps localize GBSS to the starch granules where GBSS functions in amylose biosynthesis.
encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)
Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene%2C in combination with mutation in ADL1E%2C result in defects in embryogenesis%2C cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.
Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.
transposable element gene [Source:TAIR;Acc:AT2G26630]
GO
domain
Definition
P-value
chlorophyll catabolic process
biological_process
"The chemical reactions and pathways resulting in the breakdown of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, into less complex products." [GOC:jl]