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Show all genes, phenotypes and metabolites for which the QTL profile correlates with that of the query profile above the set cut-off, the query trait is in the first row. Strongly correlating QTL profiles could indicate common regulation.
Trait ID (count=93) Type Name Pearson's Correlation Coefficient Position Description
AT5G44410 gene 1.00 5:17891132 FAD-binding Berberine family protein%3B FUNCTIONS IN: electron carrier activity%2C oxidoreductase activity%2C FAD binding%2C catalytic activity%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: FAD-binding%2C type 2 (InterPro:IPR016166)%2C Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093)%2C Berberine/berberine-like (InterPro:IPR012951)%2C FAD linked oxidase%2C N-terminal (InterPro:IPR006094)%3B BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44440.1)%3B Has 5072 Blast hits to 4970 proteins in 757 species: Archae - 49%3B Bacteria - 2261%3B Metazoa - 10%3B Fungi - 1748%3B Plants - 688%3B Viruses - 0%3B Other Eukaryotes - 316 (source: NCBI BLink).
AT5G44200 gene CBP20 0.97 5:17801737 Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.
AT3G45650 gene NAXT1 0.95 3:16758877 Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots.
AT5G43940 gene HOT5 0.95 5:17684156 Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO)%2C the condensation product of glutathione and NO%2C that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.
AT5G43810 gene AGO10 0.95 5:17610744 Encodes Argonaute10%2C a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes%2C controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo. AGO10 specifically sequesters miR166/165 to regulate shoot apical meristem development.
AT5G44785 gene OSB3 0.95 5:18069449 organellar single-stranded DNA binding protein 3 (OSB3)%3B FUNCTIONS IN: single-stranded DNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Primosome PriB/single-strand DNA-binding (InterPro:IPR000424)%3B BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 9 (TAIR:AT4G20010.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G42840 gene 0.95 5:17179073 Cysteine/Histidine-rich C1 domain family protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%2C hypocotyl%3B CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C C1-like (InterPro:IPR011424)%3B BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G27473.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G43150 gene 0.95 5:17324909 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G42990 gene UBC18 0.95 5:17243987 ubiquitin-conjugating enzyme 18 (UBC18)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C small conjugating protein ligase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)%2C Ubiquitin-conjugating enzyme%2C E2 (InterPro:IPR000608)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G45050.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G43600 gene UAH 0.95 5:17512440 Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27%25 identical and 43%25 similar to the E. coli allantoate amidohydrolase (AAH)%2C but%2C in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration%2C indicating that there this enzyme has no AAH activity.
AT1G72920 gene 0.95 1:27437899 Toll-Interleukin-Resistance (TIR) domain family protein%3B FUNCTIONS IN: transmembrane receptor activity%3B INVOLVED IN: response to wounding%2C defense response%3B LOCATED IN: intrinsic to membrane%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157)%3B BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72940.1)%3B Has 1749 Blast hits to 1659 proteins in 68 species: Archae - 0%3B Bacteria - 41%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1708%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G45940 gene NUDT11 0.95 5:18629562 Encodes a CoA pyrophosphatase%2C also has ppGpp pyrophosphohydrolase and exhibits minor activity of NADH pyrophosphatase. Most strongly expressed in embryo cotyledon and hypocotyl%2C flower%2C and phloem of vascular tissue. Over-expression mutant had a bigger plant with wider rosette.
AT5G45820 gene CIPK20 0.95 5:18586870 Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.
AT5G47230 gene ERF5 0.95 5:19179881 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1%2C ATERF-2%2C AND ATERF-5.
AT5G41685 gene 0.95 5:16669149 Mitochondrial outer membrane translocase complex%2C subunit Tom7%3B FUNCTIONS IN: protein transporter activity%2C P-P-bond-hydrolysis-driven protein transmembrane transporter activity%3B INVOLVED IN: intracellular protein transport%3B LOCATED IN: mitochondrial outer membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Mitochondrial outer membrane translocase complex%2C subunit Tom7 (InterPro:IPR012621)%3B BEST Arabidopsis thaliana protein match is: translocase of outer membrane 7 kDa subunit 2 (TAIR:AT1G64220.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G43320 gene ckl8 0.94 5:17385760 casein kinase I-like 8 (ckl8)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: casein kinase like 13 (TAIR:AT1G04440.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G44010 gene 0.94 5:17706396 unknown protein%3B Has 28 Blast hits to 26 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 28%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G42570 gene 0.94 5:17021218 B-cell receptor-associated 31-like%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: intracellular protein transport%3B LOCATED IN: endoplasmic reticulum%2C plasma membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417)%3B BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G45040 gene CYTC6A 0.94 5:18175371 Encodes a Class I cytochrome c family member possessing a high structural homology with photosynthetic cytochrome c(6) from cyanobacteria%2C but structurally and functionally distinct through the presence of a disulfide bond.
AT5G50740 gene 0.94 5:20635826 Heavy metal transport/detoxification superfamily protein %3B FUNCTIONS IN: metal ion binding%3B INVOLVED IN: metal ion transport%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%3B BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.1)%3B Has 3627 Blast hits to 2265 proteins in 257 species: Archae - 2%3B Bacteria - 226%3B Metazoa - 530%3B Fungi - 59%3B Plants - 2104%3B Viruses - 3%3B Other Eukaryotes - 703 (source: NCBI BLink).
AT5G44380 gene 0.94 5:17878672 FAD-binding Berberine family protein%3B FUNCTIONS IN: electron carrier activity%2C oxidoreductase activity%2C FAD binding%2C catalytic activity%3B INVOLVED IN: response to oxidative stress%3B LOCATED IN: cell wall%3B EXPRESSED IN: shoot apex%2C hypocotyl%2C sepal%2C root%2C stamen%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: FAD-linked oxidase%2C FAD-binding%2C subdomain 2 (InterPro:IPR016168)%2C FAD-binding%2C type 2 (InterPro:IPR016166)%2C Berberine/berberine-like (InterPro:IPR012951)%2C FAD linked oxidase%2C N-terminal (InterPro:IPR006094)%3B BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1)%3B Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86%3B Bacteria - 3186%3B Metazoa - 42%3B Fungi - 1722%3B Plants - 710%3B Viruses - 0%3B Other Eukaryotes - 530 (source: NCBI BLink).
AT1G74370 gene 0.94 1:27958086 RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G29270.2)%3B Has 323 Blast hits to 323 proteins in 56 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 171%3B Fungi - 2%3B Plants - 134%3B Viruses - 3%3B Other Eukaryotes - 13 (source: NCBI BLink).
AT5G44910 gene 0.94 5:18137349 Toll-Interleukin-Resistance (TIR) domain family protein%3B FUNCTIONS IN: transmembrane receptor activity%3B INVOLVED IN: signal transduction%2C defense response%2C innate immune response%3B LOCATED IN: intrinsic to membrane%3B EXPRESSED IN: hypocotyl%2C root%3B CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157)%3B BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45000.1)%3B Has 1558 Blast hits to 1491 proteins in 44 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1558%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G43160 gene QWRF9 0.94 5:17329275 Family of unknown function (DUF566) %3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573)%3B BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G19570.2)%3B Has 205 Blast hits to 204 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 201%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G43580 gene UPI 0.94 5:17507801 Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Functions in resistance to necrotrophic fungi and insect herbivory. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900%2C At2g38870%2C At5g43570%2C At5g43580%2C At3g50020 and At3g46860.
AT5G42790 gene PAF1 0.94 5:17159044 encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance.
AT5G45300 gene BMY2 0.94 5:18353525 Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays.
AT5G44530 gene 0.94 5:17937622 Subtilase family protein%3B FUNCTIONS IN: identical protein binding%2C serine-type endopeptidase activity%3B INVOLVED IN: proteolysis%2C negative regulation of catalytic activity%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137)%2C Peptidase S8/S53%2C subtilisin/kexin/sedolisin (InterPro:IPR000209)%2C Peptidase S8%2C subtilisin-related (InterPro:IPR015500)%2C Peptidase S8/S53%2C subtilisin%2C active site (InterPro:IPR022398)%2C Proteinase inhibitor I9%2C subtilisin propeptide (InterPro:IPR010259)%3B BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G20430.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G42890 gene SCP2 0.94 5:17194170 sterol carrier protein 2 (SCP2)%3B FUNCTIONS IN: oxidoreductase activity%2C sterol binding%3B INVOLVED IN: glyoxylate metabolic process%2C intracellular lipid transport%2C fatty acid beta-oxidation%2C seed germination%3B LOCATED IN: peroxisome%3B EXPRESSED IN: 32 plant structures%3B EXPRESSED DURING: 16 growth stages%3B CONTAINS InterPro DOMAIN/s: SCP2 sterol-binding domain (InterPro:IPR003033)%2C Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G30690 gene 0.94 4:14960594 Translation initiation factor 3 protein%3B FUNCTIONS IN: translation initiation factor activity%3B INVOLVED IN: translational initiation%3B LOCATED IN: cell wall%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation initiation factor 3%2C N-terminal (InterPro:IPR019814)%2C Translation initiation factor 3%2C conserved site (InterPro:IPR019813)%2C Translation initiation factor 3%2C C-terminal (InterPro:IPR019815)%2C Translation initiation factor 3 (InterPro:IPR001288)%3B BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G68190 gene BBX27 0.94 1:25558794 B-box zinc finger family protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: endomembrane system%2C intracellular%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C B-box (InterPro:IPR000315)%3B BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4)%3B Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 1%3B Fungi - 0%3B Plants - 1580%3B Viruses - 0%3B Other Eukaryotes - 49 (source: NCBI BLink).
AT5G44260 gene 0.94 5:17829618 Zinc finger C-x8-C-x5-C-x3-H type family protein%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G03790.1)%3B Has 1182 Blast hits to 968 proteins in 143 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 415%3B Fungi - 15%3B Plants - 396%3B Viruses - 3%3B Other Eukaryotes - 353 (source: NCBI BLink).
AT5G42660 gene 0.93 5:17102924 Protein of unknown function (DUF616)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT2G02910.1)%3B Has 345 Blast hits to 345 proteins in 43 species: Archae - 14%3B Bacteria - 50%3B Metazoa - 0%3B Fungi - 0%3B Plants - 213%3B Viruses - 0%3B Other Eukaryotes - 68 (source: NCBI BLink).
AT5G44500 gene 0.93 5:17927443 Small nuclear ribonucleoprotein family protein%3B FUNCTIONS IN: molecular_function unknown%3B LOCATED IN: nucleolus%2C nucleus%2C small nucleolar ribonucleoprotein complex%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C Small ribonucleoprotein associated%2C SmB/SmN (InterPro:IPR017131)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B BEST Arabidopsis thaliana protein match is: small nuclear ribonucleoprotein associated protein B (TAIR:AT4G20440.4)%3B Has 60118 Blast hits to 30363 proteins in 1233 species: Archae - 62%3B Bacteria - 7735%3B Metazoa - 31237%3B Fungi - 6515%3B Plants - 7441%3B Viruses - 1395%3B Other Eukaryotes - 5733 (source: NCBI BLink).
AT5G44570 gene 0.93 5:17964416 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: leaf whorl%2C hypocotyl%2C sepal%2C flower%2C leaf%3B EXPRESSED DURING: petal differentiation and expansion stage%2C LP.08 eight leaves visible%3B Has 7 Blast hits to 7 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 7%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G44020 gene 0.93 5:17712203 HAD superfamily%2C subfamily IIIB acid phosphatase %3B FUNCTIONS IN: acid phosphatase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%2C vacuole%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519)%2C Vegetative storage protein/acid phosphatase (InterPro:IPR014403)%2C Acid phosphatase%2C plant (InterPro:IPR010028)%3B BEST Arabidopsis thaliana protein match is: HAD superfamily%2C subfamily IIIB acid phosphatase (TAIR:AT1G04040.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G45050 gene TTR1 0.93 5:18176894 Encodes a member of the WRKY Transcription Factor (Group II-e) family.
AT5G43820 gene 0.93 5:17618948 Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1)%3B Has 33976 Blast hits to 11353 proteins in 260 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 169%3B Fungi - 383%3B Plants - 32575%3B Viruses - 0%3B Other Eukaryotes - 841 (source: NCBI BLink).
AT5G45560 gene 0.93 5:18465283 Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein%3B FUNCTIONS IN: lipid binding%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769)%2C Lipid-binding START (InterPro:IPR002913)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Pleckstrin homology (InterPro:IPR001849)%3B BEST Arabidopsis thaliana protein match is: ENHANCED DISEASE RESISTANCE 2 (TAIR:AT4G19040.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G77630 gene LYM3 0.93 1:29173409 Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant.
AT5G44090 gene 0.93 5:17742765 Calcium-binding EF-hand family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G03960.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G42370 gene 0.93 5:16938981 Calcineurin-like metallo-phosphoesterase superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Alkaline phosphatase D-related (InterPro:IPR018946)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G45340 gene CYP707A3 0.93 5:18368532 Encodes a protein with ABA 8'-hydroxylase activity%3B involved in ABA catabolism. Mutant analyses show that disruption in the gene results in more drought tolerance whereas overexpression results in increased transpiration rate and reduced drought tolerance. Gene involved in postgermination growth. Plant P450 CYP707A3%2C ABA 8'-hydroxylase%2C binds enantioselectively (+)-ABA but not (-)-ABA%2C whereas the enzyme binds both enantiomers of AHI1 (a structural ABA analogue used as ABA 8'-hydroxylase competitive inhibitor).
AT5G43890 gene YUC5 0.93 5:17648576 Encodes a YUCCA-like putative flavin monooxygenase%2C the activation tagging mutant has increased level of IAA%2C increased auxin response and phenotype of auxin overproduction%2C rescues erecta mutant phenotype
AT5G44860 gene 0.93 5:18110018 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1)%3B Has 233 Blast hits to 227 proteins in 25 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 1%3B Fungi - 0%3B Plants - 216%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).
AT5G39210 gene CRR7 0.93 5:15703078 Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration%2C photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex.
AT1G15010 gene 0.92 1:5171181 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1)%3B Has 71 Blast hits to 71 proteins in 13 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 69%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G42560 gene 0.92 5:17014847 Abscisic acid-responsive (TB2/DP1%2C HVA22) family protein%3B CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345)%3B BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G44070 gene CAD1 0.92 5:17734706 Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+%2C Zn2+%2C Cu2+ and Fe3+%2C but not by Co2+ or Ni2+.
AT5G42420 gene 0.92 5:16968655 Nucleotide-sugar transporter family protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853)%3B BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G21070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G33470 gene HDA14 0.92 4:16102595 Encodes HDA14%2C a member of the histone deacetylase family proteins that can deacetylate a-tubulin%2C associates with a/b-tubulin and is retained on GTP/taxol-stabilized microtubules%2C at least in part%2C by direct association with the PP2A-A2 subunit. The association of a histone deacetylase with PP2A suggests a direct link between protein phosphorylation and acetylation.
AT5G45400 gene RPA70C 0.92 5:18398832 RPA70C%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: DNA replication%3B LOCATED IN: nucleus%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type (InterPro:IPR004365)%2C Replication factor A%2C C-terminal (InterPro:IPR013955)%2C Replication factor-a protein 1 Rpa1 (InterPro:IPR004591)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Zinc finger%2C CCHC-type (InterPro:IPR001878)%2C Replication factor-A protein 1%2C N-terminal (InterPro:IPR007199)%3B BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1)%3B Has 1172 Blast hits to 939 proteins in 244 species: Archae - 33%3B Bacteria - 8%3B Metazoa - 314%3B Fungi - 240%3B Plants - 399%3B Viruses - 0%3B Other Eukaryotes - 178 (source: NCBI BLink).
AT5G41050 gene 0.92 5:16433243 Pollen Ole e 1 allergen and extensin family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041)%3B BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G26960.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G45420 gene maMYB 0.92 5:18404015 The gene encodes a MYB transcription factor belons to R2R3-MYB family of transcription factors. Knock-down mutant analysis indicates its role in root hair elongation.
AT3G13120 gene 0.92 3:4219310 Ribosomal protein S10p/S20e family protein%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%3B INVOLVED IN: translation%3B LOCATED IN: small ribosomal subunit%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731)%2C Ribosomal protein S10%2C conserved site (InterPro:IPR018268)%2C Ribosomal protein S10 (InterPro:IPR001848)%3B Has 8443 Blast hits to 8443 proteins in 2902 species: Archae - 264%3B Bacteria - 5393%3B Metazoa - 337%3B Fungi - 182%3B Plants - 190%3B Viruses - 0%3B Other Eukaryotes - 2077 (source: NCBI BLink).
AT5G45500 gene 0.92 5:18432446 RNI-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G45520.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G43830 gene 0.92 5:17622256 Aluminium induced protein with YGL and LRDR motifs%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cytosol%2C nucleus%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT1G78720 gene 0.92 1:29605457 SecY protein transport family protein%3B FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity%3B INVOLVED IN: protein secretion%2C protein transport%3B LOCATED IN: membrane%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: LP.10 ten leaves visible%2C LP.02 two leaves visible%2C petal differentiation and expansion stage%2C LP.08 eight leaves visible%3B CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208)%2C Translocon Sec61/SecY%2C plug domain (InterPro:IPR019561)%3B BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G34250.2)%3B Has 4820 Blast hits to 4813 proteins in 2037 species: Archae - 276%3B Bacteria - 3174%3B Metazoa - 262%3B Fungi - 229%3B Plants - 171%3B Viruses - 0%3B Other Eukaryotes - 708 (source: NCBI BLink).
AT3G23700 gene 0.92 3:8531374 Nucleic acid-binding proteins superfamily%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: response to cold%3B LOCATED IN: chloroplast stroma%2C nucleus%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Ribosomal protein S1%2C RNA-binding domain (InterPro:IPR003029)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein S1 (TAIR:AT5G30510.1)%3B Has 30347 Blast hits to 20342 proteins in 2814 species: Archae - 227%3B Bacteria - 22388%3B Metazoa - 193%3B Fungi - 227%3B Plants - 347%3B Viruses - 0%3B Other Eukaryotes - 6965 (source: NCBI BLink).
AT5G13090 gene 0.92 5:4153369 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G45510 gene 0.92 5:18444607 Leucine-rich repeat (LRR) family protein%3B INVOLVED IN: defense response%3B LOCATED IN: cytosol%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Disease resistance protein (InterPro:IPR000767)%3B BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G19050.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G45490 gene 0.92 5:18429047 P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: apoptosis%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G45440.1)%3B Has 3977 Blast hits to 3964 proteins in 194 species: Archae - 0%3B Bacteria - 18%3B Metazoa - 0%3B Fungi - 8%3B Plants - 3946%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink).
AT5G43730 gene 0.92 5:17560179 Disease resistance protein (CC-NBS-LRR class) family%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: defense response%2C apoptosis%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182)%2C Disease resistance protein (InterPro:IPR000767)%3B BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43740.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT2G44740 gene CYCP4%3B1 0.91 2:18441828 cyclin p4%3B1 (CYCP4%3B1)%3B CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389)%2C Cyclin-like (InterPro:IPR011028)%2C Cyclin%2C N-terminal (InterPro:IPR006671)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: CYCLIN P4%3B2 (TAIR:AT5G61650.1)%3B Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0%3B Bacteria - 18%3B Metazoa - 247%3B Fungi - 710%3B Plants - 236%3B Viruses - 0%3B Other Eukaryotes - 263 (source: NCBI BLink).
AT5G44820 gene 0.91 5:18095614 Nucleotide-diphospho-sugar transferase family protein%3B CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase%2C predicted (InterPro:IPR005069)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19970.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
AT5G44670 gene GALS2 0.91 5:18018905 Domain of unknown function (DUF23)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166)%3B BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT4G20170.1)%3B Has 204 Blast hits to 204 proteins in 35 species: Archae - 0%3B Bacteria - 27%3B Metazoa - 39%3B Fungi - 0%3B Plants - 129%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT5G42500 gene 0.91 5:16994106 Disease resistance-responsive (dirigent-like protein) family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: defense response%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265)%3B BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42510.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G41280 gene 0.91 5:16509507 Receptor-like protein kinase-related family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: anchored to plasma membrane%2C anchored to membrane%3B EXPRESSED IN: hypocotyl%2C root%2C callus%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902)%3B BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT5G41290.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G02630 gene 0.91 4:1151611 Protein kinase superfamily protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2)%3B Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107%3B Bacteria - 14277%3B Metazoa - 44024%3B Fungi - 9538%3B Plants - 32682%3B Viruses - 411%3B Other Eukaryotes - 17134 (source: NCBI BLink).
AT4G24920 gene 0.91 4:12819164 secE/sec61-gamma protein transport protein%3B FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity%3B INVOLVED IN: intracellular protein transport%2C protein transport%2C protein targeting%3B LOCATED IN: membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein translocase SEC61 complex gamma subunit (InterPro:IPR008158)%2C Protein secE/sec61-gamma protein (InterPro:IPR001901)%3B BEST Arabidopsis thaliana protein match is: secE/sec61-gamma protein transport protein (TAIR:AT5G50460.1)%3B Has 578 Blast hits to 578 proteins in 210 species: Archae - 2%3B Bacteria - 0%3B Metazoa - 242%3B Fungi - 133%3B Plants - 109%3B Viruses - 0%3B Other Eukaryotes - 92 (source: NCBI BLink).
AT3G15130 gene 0.91 3:5096402 Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 42839 Blast hits to 13577 proteins in 243 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 52%3B Fungi - 90%3B Plants - 42162%3B Viruses - 0%3B Other Eukaryotes - 535 (source: NCBI BLink).
AT1G30520 gene AAE14 0.91 1:10810397 Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.
AT3G58690 gene 0.91 3:21709128 Protein kinase superfamily protein%3B FUNCTIONS IN: kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54820.1)%3B Has 119556 Blast hits to 118228 proteins in 3954 species: Archae - 119%3B Bacteria - 14059%3B Metazoa - 43160%3B Fungi - 10190%3B Plants - 33928%3B Viruses - 396%3B Other Eukaryotes - 17704 (source: NCBI BLink).
AT5G14660 gene PDF1B 0.91 5:4726641 Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J%2C 2008%2C vol 413:417-427).
AT5G40770 gene PHB3 0.91 5:16314850 prohibitin 3
AT1G49530 gene GGPS6 0.91 1:18332429 encodes a mitochondria-targeted geranylgeranyl pyrophosphate synthase
AT2G25920 gene 0.91 2:11054168 BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2)%3B Has 131 Blast hits to 125 proteins in 54 species: Archae - 0%3B Bacteria - 50%3B Metazoa - 12%3B Fungi - 12%3B Plants - 41%3B Viruses - 0%3B Other Eukaryotes - 16 (source: NCBI BLink).
AT5G35210 gene PTM 0.91 5:13474196 Encodes a chloroplast envelope-bound plant homeodomain (PHD) transcription factor with transmembrane domains that functions in multiple retrograde signal pathways. The proteolytic cleavage of PTM occurs in response to retrograde signals and amino-terminal PTM accumulates in the nucleus%2C where it activates ABI4 transcription in a PHD-dependent manner associated with histone modifications.
AT5G45480 gene 0.91 5:18426104 Protein of unknown function (DUF594)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45540.1)%3B Has 1371 Blast hits to 876 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1371%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G43170 gene ZF3 0.91 5:17330945 Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.
AT5G47130 gene 0.91 5:19138840 Bax inhibitor-1 family protein%3B INVOLVED IN: negative regulation of apoptosis%2C anti-apoptosis%3B LOCATED IN: integral to membrane%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214)%2C Bax inhibitor 1%2C conserved site (InterPro:IPR006213)%3B BEST Arabidopsis thaliana protein match is: BAX inhibitor 1 (TAIR:AT5G47120.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT5G45270 gene None 0.91 None:None None
AT5G35790 gene G6PD1 0.90 5:13956672 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.
AT2G43240 gene 0.90 2:17970859 Nucleotide-sugar transporter family protein%3B FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity%2C sugar:hydrogen symporter activity%3B INVOLVED IN: carbohydrate transport%2C nucleotide-sugar transport%3B LOCATED IN: integral to membrane%2C Golgi membrane%3B CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271)%2C UDP/CMP-sugar transporter (InterPro:IPR021189)%3B BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 6 (TAIR:AT3G59360.2)%3B Has 971 Blast hits to 960 proteins in 174 species: Archae - 2%3B Bacteria - 18%3B Metazoa - 525%3B Fungi - 109%3B Plants - 182%3B Viruses - 0%3B Other Eukaryotes - 135 (source: NCBI BLink).
AT5G45430 gene 0.90 5:18407150 Protein kinase superfamily protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C pollen tube%3B EXPRESSED DURING: M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G58160 gene 0.90 5:23533375 actin binding%3B FUNCTIONS IN: actin binding%3B INVOLVED IN: cellular component organization%2C actin cytoskeleton organization%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104)%2C C2 calcium/lipid-binding domain%2C CaLB (InterPro:IPR008973)%2C Actin-binding FH2 (InterPro:IPR015425)%2C Tensin phosphatase%2C C2 domain (InterPro:IPR014020)%3B BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1)%3B Has 66030 Blast hits to 44960 proteins in 1807 species: Archae - 80%3B Bacteria - 11670%3B Metazoa - 27723%3B Fungi - 9802%3B Plants - 6854%3B Viruses - 1874%3B Other Eukaryotes - 8027 (source: NCBI BLink).
AT5G40480 gene EMB3012 0.90 5:16213036 embryo defective 3012 (EMB3012)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Invasin/intimin cell-adhesion (InterPro:IPR008964)%2C Bacterial Ig-like%2C group 2 (InterPro:IPR003343)%3B Has 264 Blast hits to 238 proteins in 89 species: Archae - 0%3B Bacteria - 31%3B Metazoa - 150%3B Fungi - 0%3B Plants - 48%3B Viruses - 0%3B Other Eukaryotes - 35 (source: NCBI BLink).
AT4G36660 gene 0.90 4:17285702 Protein of unknown function (DUF1195)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1)%3B Has 67 Blast hits to 67 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 67%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G06980 gene 0.90 1:2142939 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: sepal%2C male gametophyte%2C carpel%3B EXPRESSED DURING: 4 anthesis%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1)%3B Has 159 Blast hits to 159 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 159%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT5G45390 gene CLPP4 0.90 5:18396254 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).
AT5G53500 gene 0.90 5:21725441 Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G24320.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT3G02570 gene MEE31 0.90 3:543346 Encodes a protein with phosphomannose isomerase activity.
AT5G46500 gene 0.90 5:18855955 BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46260.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).